PANTHER Gene Information

Gene Symbol(s):

POPTR_002G238100

Organism:

Populus trichocarpa

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Tree

Gene Name:

U5 small nuclear ribonucleoprotein TSSC4

Gene ID:

POPTR_002G238100v3

Protein ID:

B9GNG1

Persistent Id:

PTN001781333

Alternate Ids:

B9GNG1_POPTR(UniProtKB-ID)	7488605(GeneID)
POPTR_002G238100v3(Ensembl)	CM009291(EMBL)
XM_002302981(refSeq)	224069655(GI)
B9GNG1(Synonym)	PNT51333(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 (PTHR13445)
PANTHER Subfamily:	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN TSSC4 (PTHR13445:SF3)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	RNA splicing, mRNA processing
GO CC Complete:	nucleus, cytoplasm, spliceosomal complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=12386\|UniProtKB=Q9Y5U2	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000003178.6\|UniProtKB=H2Q2X0	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000007586.3\|UniProtKB=G3QX83	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000013772.4\|UniProtKB=F6Q7U7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1861712\|UniProtKB=Q9JHE7	Mus musculus	LDO
RAT\|RGD=1307043\|UniProtKB=Q5XIB1	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000047793\|UniProtKB=Q1LZD3	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000036015.3\|UniProtKB=A0A287A8Y0	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000059583.1\|UniProtKB=F7BWG5	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000043860.2\|UniProtKB=A0A337S9Z1	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845011479.1\|UniProtKB=A0A8I3NUR1	Canis lupus familiaris	LDO
CHICK\|Ensembl=ENSGALG00010024188.1\|UniProtKB=A0A8V0ZR81	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000002763.3\|UniProtKB=G1KB35	Anolis carolinensis	LDO
DANRE\|ZFIN=ZDB-GENE-060825-263\|UniProtKB=Q0P4A6	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000017325.1\|UniProtKB=W5NLC1	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118427298\|UniProtKB=A0A9J7M1J4	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC100887940\|UniProtKB=A0A7M7LLQ3	Strongylocentrotus purpuratus	LDO
DROME\|FlyBase=FBgn0036063\|UniProtKB=Q9VT74	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP005409\|UniProtKB=Q7Q7A9	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC011507\|UniProtKB=D6W6F8	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_329147\|UniProtKB=E9HFT9	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW009847\|UniProtKB=B7Q064	Ixodes scapularis	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g240971\|UniProtKB=A7RVI2	Nematostella vectensis	LDO
AMBTC\|EnsemblGenome=AMTR_s00016p00104610\|UniProtKB=W1PDY8	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_27G00210\|UniProtKB=A0A0K9PDB6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma03_g20480\|UniProtKB=A0A804IEB3	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_010110mg\|UniProtKB=K3Y7B9	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G058300\|UniProtKB=A0A1B6PKG0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb421370\|UniProtKB=C0P7A6	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb084870\|UniProtKB=C0PBP4	Zea mays	LDO
BRADI\|EnsemblGenome=BRADI_5g08610v3\|UniProtKB=I1IX92	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0164150\|UniProtKB=F2CXB3	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS2B02G304300\|UniProtKB=A0A3B6C946	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS2D02G285900\|UniProtKB=A0A3B6DEA2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G287500\|UniProtKB=A0A3B6AYR4	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_009262\|UniProtKB=A0A1U7Z7A8	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110805247\|UniProtKB=A0A9R0KCG9	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0802701\|UniProtKB=A0A9K3DHG6	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr17g0550921\|UniProtKB=A0A251RQE7	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300143360\|UniProtKB=A0A9R1XL99	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a006809mg\|UniProtKB=A0A022R7B7	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_06554\|UniProtKB=A0A2G3AB60	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400021424\|UniProtKB=M1BXJ1	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc02g091940.3\|UniProtKB=A0A3Q7FCP2	Solanum lycopersicum	LDO
VITVI\|EnsemblGenome=Vitvi14g01463\|UniProtKB=F6H429	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I02446\|UniProtKB=A0A059ATJ9	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00007248001\|UniProtKB=A0A078IRS9	Brassica napus	O
BRACM\|EnsemblGenome=Bra005548\|UniProtKB=M4CMW0	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_C09P63160.1\|UniProtKB=A0A078FA08	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra008790\|UniProtKB=M4CX43	Brassica campestris	LDO
ARATH\|TAIR=locus=2159138\|UniProtKB=Q9FFX8	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107935850\|UniProtKB=A0A1U8MEI9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107934923\|UniProtKB=A0A1U8MBL3	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_017346\|UniProtKB=A0A061EE81	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g014297mg\|UniProtKB=A0A067DX48	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_11G076800\|UniProtKB=A0A2C9UZE4	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1445090\|UniProtKB=B9RGX4	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_19G103400\|UniProtKB=I1N816	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G047900\|UniProtKB=A0A0R0FY87	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_7g084070\|UniProtKB=G7KX98	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr10_00300\|UniProtKB=A0A2I4FTA4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G599460\|UniProtKB=A0A0A0LDS6	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G313500\|UniProtKB=A0A251Q8H4	Prunus persica	LDO
PHYPA\|EnsemblGenome=Pp3c5_23700\|UniProtKB=A0A2K1KKU4	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0001s0546\|UniProtKB=A0A2R6XX23	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002910030\|UniProtKB=A0A1Y1I681	Klebsormidium nitens	LDO