PANTHER Gene Information

Gene Symbol(s):

TOP6B

Organism:

Populus trichocarpa

View Gene in Tree

Tree

Gene Name:

DNA topoisomerase 6 subunit B

Gene ID:

POPTR_003G211000v3

Protein ID:

U5GK39

Persistent Id:

PTN002247880

Alternate Ids:

18097264(GeneID)	XM_006386031(refSeq)
U5GK39_POPTR(UniProtKB-ID)	CM009292(EMBL)
566164035(GI)	U5GK39(Synonym)
PNT46750(EMBL-CDS)	POPTR_003G211000v3(Ensembl)
Show All

PANTHER Classification

PANTHER Family:	30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 (PTHR10871)
PANTHER Subfamily:	DNA TOPOISOMERASE 6 SUBUNIT B (PTHR10871:SF4)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	small ribosomal subunit cytosol
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	DNA binding, ATP binding, DNA topoisomerase activity, DNA negative supercoiling activity, DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO BP Complete:	DNA topological change
GO CC Complete:	nucleus, DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex, cytosol, small ribosomal subunit

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
MONBE\|EnsemblGenome=MONBRDRAFT_15735\|UniProtKB=A9UUT9	Monosiga brevicollis	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_40335\|UniProtKB=B8BZH3	Thalassiosira pseudonana	LDO
CHLRE\|EnsemblGenome=CHLRE_01g019750v5\|UniProtKB=A0A2K3E5Z0	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00022p00212920\|UniProtKB=W1PNR1	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_418G00070\|UniProtKB=A0A0K9P2W3	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g00040\|UniProtKB=A0A804HNK3	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_029103mg\|UniProtKB=K3ZR73	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3002G152900\|UniProtKB=C5X862	Sorghum bicolor	LDO
ORYSJ\|EnsemblGenome=Os09g0279600\|UniProtKB=Q6H442	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g27057v3\|UniProtKB=I1IP09	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0471060\|UniProtKB=A0A8I7B8U6	Hordeum vulgare subsp. vulgare	LDO
NELNU\|Gene=LOC104597518\|UniProtKB=A0A1U7ZUU4	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110802045\|UniProtKB=A0A9R0J838	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0657421\|UniProtKB=A0A251SK59	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200087220\|UniProtKB=A0A9R1WKI7	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002442mg\|UniProtKB=A0A022S227	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_02195\|UniProtKB=A0A2G3AJH3	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc01g014490.3\|UniProtKB=A0A3Q7EUH2	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107815486\|UniProtKB=A0A1S4C6K2	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi06g00160\|UniProtKB=D7SLA7	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B03662\|UniProtKB=A0A059D9G5	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A05P28000.1\|UniProtKB=A0A078FZ35	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra035745\|UniProtKB=M4F3U5	Brassica campestris	LDO
ARATH\|TAIR=locus=2091916\|UniProtKB=Q9C5V6	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107945355\|UniProtKB=A0A1U8N775	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_013641\|UniProtKB=A0A061FWJ9	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g008575mg\|UniProtKB=A0A067FC40	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_14G014500\|UniProtKB=A0A2C9UHJ4	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1576900\|UniProtKB=B9RI75	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_13G342900\|UniProtKB=I1M541	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_2g098510\|UniProtKB=G7IHQ9	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr05_15470\|UniProtKB=A0A6P9EDF1	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G286930\|UniProtKB=A0A0A0KWX5	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G018600\|UniProtKB=M5W7F8	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_154417\|UniProtKB=D8SDA0	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_92654\|UniProtKB=D8RF35	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c22_12720\|UniProtKB=A0A2K1IN99	Physcomitrella patens	LDO
NITMS\|EnsemblGenome=Nmar_1408\|UniProtKB=A9A3P2	Nitrosopumilus maritimus	LDO
KORCO\|EnsemblGenome=Kcr_1451\|UniProtKB=B1L6W8	Korarchaeum cryptofilum	LDO
SACS2\|EnsemblGenome=SSO0968\|UniProtKB=Q97ZF0	Sulfolobus solfataricus	LDO
PYRAE\|EnsemblGenome=PAE2217\|UniProtKB=Q8ZVM0	Pyrobaculum aerophilum	LDO
METAC\|EnsemblGenome=MA_1587\|UniProtKB=Q8TQF7	Methanosarcina acetivorans	LDO
METJA\|EnsemblGenome=MJ_1028\|UniProtKB=Q58434	Methanocaldococcus jannaschii	LDO
HALSA\|EnsemblGenome=VNG_0885G\|UniProtKB=Q9HR31	Halobacterium salinarum	LDO
THEKO\|EnsemblGenome=TK0799\|UniProtKB=Q5JH81	Thermococcus kodakaraensis	LDO
CHLAA\|EnsemblGenome=Caur_2393\|UniProtKB=A9WH90	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4727\|UniProtKB=O86773	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv3460c\|UniProtKB=P9WH61	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_175\|UniProtKB=P47421	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO3455\|UniProtKB=A5I7I0	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0213\|UniProtKB=P66393	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02487\|UniProtKB=Q2FW30	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00686\|UniProtKB=P66383	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01410\|UniProtKB=P20282	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0156\|UniProtKB=P62175	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1475\|UniProtKB=Q9X1I5	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_2125\|UniProtKB=Q9RSJ9	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC91515\|UniProtKB=Q7NFF2	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17327\|UniProtKB=P73299	Synechocystis	O
LEPIN\|EnsemblGenome=LA_0762\|UniProtKB=Q9XD12	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_2704\|UniProtKB=Q8A499	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_509\|UniProtKB=P0CE04	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB12623\|UniProtKB=Q7UIC7	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_074\|UniProtKB=O66486	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1424\|UniProtKB=B5YG25	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1005\|UniProtKB=B8E1F7	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1286\|UniProtKB=Q8RE41	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_1296\|UniProtKB=P56020	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB0165\|UniProtKB=P66386	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2834\|UniProtKB=Q749B0	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC50643\|UniProtKB=Q89JA6	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0260\|UniProtKB=P59753	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0799\|UniProtKB=P44380	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_0253\|UniProtKB=Q8EK48	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_2574\|UniProtKB=Q9KP05	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0916\|UniProtKB=Q9Z3F0	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA4241\|UniProtKB=Q9HWF7	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM3418\|UniProtKB=Q8ZLM1	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_0229\|UniProtKB=Q8ZJ90	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE77993\|UniProtKB=P0A7S9	Escherichia coli	O