PANTHER Gene Information

Gene Symbol(s):

POPTR_005G005000

Organism:

Populus trichocarpa

View Gene in Tree

Tree

Gene Name:

FACT complex subunit

Gene ID:

POPTR_005G005000v3

Protein ID:

U5GCX0

Persistent Id:

PTN002303910

Alternate Ids:

U5GCX0_POPTR(UniProtKB-ID)	18098490(GeneID)
566168609(GI)	XP_006382287(refSeq)
CM009294(EMBL)	POPTR_005G005000v3(Ensembl)
U5GCX0(Synonym)	PNT34287(EMBL-CDS)
Show All

PANTHER Classification

PANTHER Family:	CDC68 RELATED (PTHR13980)
PANTHER Subfamily:	FACT COMPLEX SUBUNIT SPT16 (PTHR13980:SF18)
PANTHER GO-slim Molecular Function:	nucleosome binding
PANTHER GO-slim Biological Process:	transcription elongation by RNA polymerase II
PANTHER GO-slim Cellular Component:	transcription elongation factor complex chromatin
PANTHER protein class:	chromatin/chromatin-binding, or -regulatory protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	nucleosome binding
GO BP Complete:	DNA repair, DNA replication, transcription elongation by RNA polymerase II
GO CC Complete:	nucleus, FACT complex, chromosome

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000049898.1\|UniProtKB=A0A2I3RA79	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000040520.1\|UniProtKB=A0A2I2YGB3	Gorilla gorilla gorilla	O
HUMAN\|HGNC=11465\|UniProtKB=Q9Y5B9	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000006122.4\|UniProtKB=H2Q7Y1	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000002243.3\|UniProtKB=G3QIK3	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000015000.4\|UniProtKB=G7MWS8	Macaca mulatta	O
MOUSE\|MGI=MGI=1890948\|UniProtKB=Q920B9	Mus musculus	O
RAT\|RGD=1310032\|UniProtKB=A0A8I5ZJ57	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000020421.6\|UniProtKB=E1BNP8	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000022900.3\|UniProtKB=F1S8K5	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000021686.4\|UniProtKB=F6WKK9	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000013858.6\|UniProtKB=M3WJL5	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845025698.1\|UniProtKB=A0A8I3PYF0	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000006539.3\|UniProtKB=F7BV95	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000011763.3\|UniProtKB=F6T059	Ornithorhynchus anatinus	O
ANOCA\|Ensembl=ENSACAG00000003193.4\|UniProtKB=H9G787	Anolis carolinensis	O
XENLA\|Gene=supt16h\|UniProtKB=Q9W603	Xenopus laevis	O
XENLA\|Gene=supt16h.L\|UniProtKB=A0A1L8HZH1	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-979305\|UniProtKB=F7EL37	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000008755.3\|UniProtKB=H2LXY9	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-031118-96\|UniProtKB=A5A4L9	Danio rerio	O
CIOIN\|Ensembl=ENSCING00000003147.3\|UniProtKB=F6QIX3	Ciona intestinalis	O
BRAFL\|Gene=LOC118416987\|UniProtKB=A0A9J7MRI7	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC583289\|UniProtKB=A0A7M7SU56	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00018849\|UniProtKB=Q9N5R9	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00033188\|UniProtKB=Q61E63	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00098826\|UniProtKB=A0A2A6CCS2	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0002183\|UniProtKB=Q8IRG6	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP006817\|UniProtKB=Q7PTA1	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC014294\|UniProtKB=D6WL41	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_220868\|UniProtKB=E9FW30	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW004234\|UniProtKB=B7PI85	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG193835\|UniProtKB=T1FVE6	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g247576\|UniProtKB=A7SV15	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG18255\|UniProtKB=B3RJ01	Trichoplax adhaerens	O
YEAST\|SGD=S000003175\|UniProtKB=P32558	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER360C\|UniProtKB=Q756A7	Eremothecium gossypii	O
CANAL\|CGD=CAL0000198046\|UniProtKB=Q5A1D5	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_D14652g\|UniProtKB=Q6C931	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_05102\|UniProtKB=Q5B2X8	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_1G07720\|UniProtKB=Q4WJ02	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU01164\|UniProtKB=Q8X0X6	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_04853\|UniProtKB=A7EHR1	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_01031\|UniProtKB=Q0V4N3	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBP8B7.19\|UniProtKB=O94267	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_02416\|UniProtKB=B6K2E8	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNC02310\|UniProtKB=P0CQ22	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_05568\|UniProtKB=Q4P2U5	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_04450\|UniProtKB=E3K2C5	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_04452\|UniProtKB=E3K2C7	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_06430\|UniProtKB=E3K7H0	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_06678\|UniProtKB=E3K8A4	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_19138\|UniProtKB=F4P0B1	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_109860\|UniProtKB=C4M3K5	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0282677\|UniProtKB=Q54S43	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_55977\|UniProtKB=F0ZPA4	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_29_0020\|UniProtKB=E9ADK4	Leishmania major	O
TRYB2\|Gene_ORFName=Tb927.3.5620\|UniProtKB=Q580R3	Trypanosoma brucei	O
GIAIC\|EnsemblGenome=GL50803_17430\|UniProtKB=A8BD57	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_212800\|UniProtKB=A2E2S0	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_0517400\|UniProtKB=Q8I3T4	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00028498001\|UniProtKB=A0BFZ6	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00018158001\|UniProtKB=A0DLC4	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00021874001\|UniProtKB=A0E089	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00031143001\|UniProtKB=A0BQU7	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_28217\|UniProtKB=B8C213	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GEH1_PHYRM\|UniProtKB=H3GEH1	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_12g540076v5\|UniProtKB=A0A2K3D701	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00039p00161440\|UniProtKB=U5D0Q6	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00682p00010920\|UniProtKB=W1NNZ7	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_160G00290\|UniProtKB=A0A0K9PUF2	Zostera marina	O
MUSAM\|EnsemblGenome=Ma01_g10150\|UniProtKB=A0A804HSE4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g25520\|UniProtKB=A0A804ITT0	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_021086mg\|UniProtKB=K3Z3G8	Setaria italica	O
ORYSJ\|EnsemblGenome=Os12g0446500\|UniProtKB=Q2QRX9	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_4g07831v3\|UniProtKB=A0A0Q3EGG2	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0666350\|UniProtKB=M0UUX0	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS7B02G092700\|UniProtKB=A0A3B6SFP9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G187500\|UniProtKB=A0A3B6RFX5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7D02G188500\|UniProtKB=A0A3B6TMG4	Triticum aestivum	O
SETIT\|EnsemblGenome=SETIT_009230mg\|UniProtKB=K3Y4U2	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3004G007133\|UniProtKB=A0A194YM58	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3007G192600\|UniProtKB=A0A1B6PIL6	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3001G025000\|UniProtKB=A0A1B6QH03	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb229990\|UniProtKB=Q8H6B1	Zea mays	O
ORYSJ\|EnsemblGenome=Os04g0321600\|UniProtKB=Q7X923	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g59920v3\|UniProtKB=I1H4L1	Brachypodium distachyon	O
BRADI\|EnsemblGenome=BRADI_1g59940v3\|UniProtKB=I1H4L4	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0104510\|UniProtKB=M0Z854	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2A02G017400\|UniProtKB=A0A3B6APJ1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G082700\|UniProtKB=A0A3B6BYS2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G068300\|UniProtKB=A0A1D5UV36	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G069500\|UniProtKB=A0A3B6AR67	Triticum aestivum	O
NELNU\|Gene=LOC104608426\|UniProtKB=A0A1U8AXG0	Nelumbo nucifera	O
NELNU\|Gene=LOC104611246\|UniProtKB=A0A1U8BHR8	Nelumbo nucifera	O
SPIOL\|Gene=LOC110775799\|UniProtKB=A0A9R0HSF6	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr08g0342771\|UniProtKB=A0A251U5W6	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0826061\|UniProtKB=A0A9K3DNK0	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C600304050\|UniProtKB=A0A9R1V2T0	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a024040mg\|UniProtKB=A0A022RHM2	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_33275\|UniProtKB=A0A2G2XZG0	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400025001\|UniProtKB=M1CC77	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc10g006770.3\|UniProtKB=A0A3Q7IAC7	Solanum lycopersicum	O
CAPAN\|EnsemblGenome=T459_33913\|UniProtKB=A0A1U8GQH9	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400018250\|UniProtKB=M1BJZ3	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc01g101030.3\|UniProtKB=A0A3Q7EP89	Solanum lycopersicum	O
TOBAC\|Gene=LOC107759376\|UniProtKB=A0A1S3WYS9	Nicotiana tabacum	O
TOBAC\|Gene=LOC107778560\|UniProtKB=A0A1S3YQB6	Nicotiana tabacum	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a001381mg\|UniProtKB=A0A022PYU2	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_06038\|UniProtKB=A0A2G3A9J8	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400017731\|UniProtKB=M1BI33	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc02g081590.3\|UniProtKB=A0A3Q7F6D4	Solanum lycopersicum	O
TOBAC\|Gene=LOC107813364\|UniProtKB=A0A1S4BYX8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107828462\|UniProtKB=A0A1S4DCX8	Nicotiana tabacum	O
CAPAN\|EnsemblGenome=T459_33912\|UniProtKB=A0A2G2XXJ2	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400018294\|UniProtKB=M1BK69	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc01g101020.3\|UniProtKB=A0A3Q7EPB6	Solanum lycopersicum	O
TOBAC\|Gene=LOC107759375\|UniProtKB=A0A1S3WYS2	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi14g00050\|UniProtKB=F6I4V9	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi14g00051\|UniProtKB=F6I4V8	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_J01613\|UniProtKB=A0A059AEB0	Eucalyptus grandis	O
BRACM\|EnsemblGenome=Bra035286\|UniProtKB=M4F2I7	Brassica campestris	O
BRACM\|EnsemblGenome=Bra000719\|UniProtKB=M4C941	Brassica campestris	O
ARATH\|TAIR=locus=2132756\|UniProtKB=O82491	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107888357\|UniProtKB=A0A1U8HX43	Gossypium hirsutum	O
GOSHI\|Gene=LOC107927240\|UniProtKB=A0A1U8LGL6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107886465\|UniProtKB=A0A1U8HIM3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107893503\|UniProtKB=A0A1U8ICI5	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_026818\|UniProtKB=A0A061F3Y4	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g001503mg\|UniProtKB=A0A067DRA5	Citrus sinensis	O
MANES\|EnsemblGenome=MANES_04G151800\|UniProtKB=A0A251L4P4	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_04G151900\|UniProtKB=A0A251L4Z0	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0995410\|UniProtKB=B9T506	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_13G152600\|UniProtKB=I1LM72	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_18G044500\|UniProtKB=K7MPW8	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_13G152700\|UniProtKB=I1LM70	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_18G044600\|UniProtKB=K7MPW9	Glycine max	O
MEDTR\|EnsemblGenome=MTR_6g009500\|UniProtKB=G7KK14	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_3g064470\|UniProtKB=G7J7Y6	Medicago truncatula	O
CUCSA\|EnsemblGenome=Csa_6G525380\|UniProtKB=A0A0A0KP38	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_6G306600\|UniProtKB=M5W3N0	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_269691\|UniProtKB=D8T4U2	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_170207\|UniProtKB=D8RCD3	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c13_15990\|UniProtKB=A0A2K1JM53	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0002s0004\|UniProtKB=A0A2R6XTS5	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_003390100\|UniProtKB=A0A1Y1I8F2	Klebsormidium nitens	O