PANTHER Gene Information

Gene Symbol(s):

POPTR_008G002300

Organism:

Populus trichocarpa

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Gene Name:

Katanin p80 WD40 repeat-containing subunit B1 homolog

Gene ID:

POPTR_008G002300v3

Protein ID:

A0A2K1Z9C1

Persistent Id:

PTN007676590

Alternate Ids:

RQO93962(EMBL-CDS)	A0A2K1Z9C1(Synonym)
POPTR_008G002300v3(Ensembl)	A0A2K1Z9C1_POPTR(UniProtKB-ID)
CM009297(EMBL)
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PANTHER Classification

PANTHER Family:	KATANIN P80 SUBUNIT (PTHR19845)
PANTHER Subfamily:	KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1 (PTHR19845:SF0)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	microtubule depolymerization
PANTHER GO-slim Cellular Component:	microtubule organizing center microtubule associated complex
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	microtubule binding
GO BP Complete:	microtubule severing, microtubule depolymerization
GO CC Complete:	cytoskeleton, cytoplasm, katanin complex, microtubule

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=6217\|UniProtKB=Q9BVA0	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000008166.6\|UniProtKB=H2QB75	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000007134.3\|UniProtKB=G3QW37	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000015695.4\|UniProtKB=G7NPV4	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1921437\|UniProtKB=Q8BG40	Mus musculus	LDO
RAT\|RGD=1311256\|UniProtKB=A0A0G2JX20	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001848.6\|UniProtKB=A0A3Q1LYK8	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000002813.5\|UniProtKB=A0A5G2QF89	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000016979.4\|UniProtKB=A0A9L0RIL6	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000002687.6\|UniProtKB=M3VYZ0	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845002757.1\|UniProtKB=A0A8I3N368	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000014037.3\|UniProtKB=F6UQJ4	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000004682.3\|UniProtKB=A0A6I8NC36	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010021570.1\|UniProtKB=A0A8V0ZIZ0	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_23h13\|UniProtKB=Q5ZIU8	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000000837.4\|UniProtKB=A0A803T984	Anolis carolinensis	LDO
XENLA\|Gene=katnb1.S\|UniProtKB=Q7ZYI4	Xenopus laevis	O
XENLA\|Gene=katnb1\|UniProtKB=Q4V7Y7	Xenopus laevis	LDO
XENLA\|Gene=katnb1.L\|UniProtKB=A0A1L8GLG1	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-998271\|UniProtKB=Q6NVM2	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000018451.2\|UniProtKB=H2MW72	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040426-1954\|UniProtKB=Q7ZUV2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000006166.1\|UniProtKB=W5MGD8	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000016265.2\|UniProtKB=F6Z7E0	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118416989\|UniProtKB=A0A9J7L8V2	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC115918674\|UniProtKB=A0A7M7NVS6	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC100891421\|UniProtKB=A0A7M7HII2	Strongylocentrotus purpuratus	O
STRPU\|Gene=KATNB1\|UniProtKB=O61585	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC762546\|UniProtKB=A0A7M7N6D7	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00009826\|UniProtKB=Q9XTS3	Caenorhabditis elegans	O
CAEEL\|WormBase=WBGene00009825\|UniProtKB=Q9XTS1	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG18869\|UniProtKB=A8XU87	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00272454\|UniProtKB=A0A2A6CCI5	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0040207\|UniProtKB=Q0KHS0	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP000319\|UniProtKB=A0A1S4G8G7	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC034689\|UniProtKB=A0A139WIM1	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_213756\|UniProtKB=E9GU58	Daphnia pulex	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g198268\|UniProtKB=A7RK37	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g133468\|UniProtKB=A7SV12	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG63553\|UniProtKB=B3RIM3	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_22808\|UniProtKB=A9US53	Monosiga brevicollis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_86622\|UniProtKB=F4NW07	Batrachochytrium dendrobatidis	LDO
LEIMA\|EnsemblGenome=LMJF_35_4670\|UniProtKB=E9AFU4	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb09.211.1500\|UniProtKB=Q38E06	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_363890\|UniProtKB=A2EDV8	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_165010\|UniProtKB=A2DUI2	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_499000\|UniProtKB=A2FCK5	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_397060\|UniProtKB=A2DX94	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_230250\|UniProtKB=A2F113	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_130970\|UniProtKB=A2EPM0	Trichomonas vaginalis	LDO
PARTE\|EnsemblGenome=GSPATT00026508001\|UniProtKB=A0EFU4	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00011517001\|UniProtKB=A0CYP9	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00027388001\|UniProtKB=A0EIB8	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00039078001\|UniProtKB=A0CY73	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00006363001\|UniProtKB=A0C4Z7	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00011153001\|UniProtKB=A0CXK4	Paramecium tetraurelia	LDO
CHLRE\|EnsemblGenome=CHLRE_03g160450v5\|UniProtKB=A8J7C9	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00171p00033150\|UniProtKB=W1PJR1	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_15G01520\|UniProtKB=A0A0K9PUV0	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_133G00560\|UniProtKB=A0A0K9PYX6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g04190\|UniProtKB=A0A804HQ40	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_000309mg\|UniProtKB=K3XEJ2	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G316700\|UniProtKB=A0A1W0VZU9	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb369860\|UniProtKB=A0A804QVX1	Zea mays	O
ORYSJ\|EnsemblGenome=Os01g0780400\|UniProtKB=Q5ZCG1	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_2g51760v3\|UniProtKB=A0A0Q3N0N2	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0293550\|UniProtKB=A0A8I6X8J1	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3B02G349000\|UniProtKB=A0A3B6FQL7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G317500\|UniProtKB=A0A3B6ENM9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G313800\|UniProtKB=A0A3B6GVD5	Triticum aestivum	O
MUSAM\|EnsemblGenome=Ma04_g05430\|UniProtKB=A0A804ILC0	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma03_g28310\|UniProtKB=A0A804IH96	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma09_g24210\|UniProtKB=A0A804KN53	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_034238mg\|UniProtKB=K4A5T4	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3001G207400\|UniProtKB=A0A1Z5S6L0	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb044790\|UniProtKB=A0A1D6KS54	Zea mays	O
ORYSJ\|EnsemblGenome=Os10g0494800\|UniProtKB=Q337H9	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g29861v3\|UniProtKB=A0A2K2D029	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0045950\|UniProtKB=F2DZA4	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS1A02G164300\|UniProtKB=A0A3B5XYM9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G161300\|UniProtKB=A0A3B5ZT16	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G151100\|UniProtKB=A0A3B5ZS44	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1B02G181100\|UniProtKB=A0A3B5YWZ4	Triticum aestivum	O
SETIT\|EnsemblGenome=SETIT_021140mg\|UniProtKB=K3Z3M2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G267500\|UniProtKB=A0A1B6PP41	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb066150\|UniProtKB=A0A1D6DT78	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb433770\|UniProtKB=K7UN87	Zea mays	LDO
ORYSJ\|Gene_OrderedLocusName=Os04g0677700\|UniProtKB=A0A0P0WGD2	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_5g26190v3\|UniProtKB=I1J3D1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0209810\|UniProtKB=A0A8I6X205	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS2A02G592600\|UniProtKB=A0A3B6BAK4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G591600\|UniProtKB=A0A3B6CGK6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G561900\|UniProtKB=A0A3B6DNY2	Triticum aestivum	LDO
NELNU\|Gene=LOC104610121\|UniProtKB=A0A1U8QBH2	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110782119\|UniProtKB=A0A9R0I322	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0789531\|UniProtKB=A0A9K3DFA1	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr17g0541111\|UniProtKB=A0A251RMP6	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300115490\|UniProtKB=A0A9R1W261	Lactuca sativa	LDO
CAPAN\|EnsemblGenome=T459_14184\|UniProtKB=A0A1U8GME8	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400025310\|UniProtKB=M1CDF7	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc04g008720.3\|UniProtKB=A0A3Q7GPH9	Solanum lycopersicum	O
TOBAC\|Gene=LOC107801488\|UniProtKB=A0A1S4AUE3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107831503\|UniProtKB=A0A1S4DNM7	Nicotiana tabacum	O
CAPAN\|EnsemblGenome=T459_04384\|UniProtKB=A0A2G3A507	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc02g021360.3\|UniProtKB=A0A3Q7EW96	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107793987\|UniProtKB=A0A1S4A5N0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107771488\|UniProtKB=A0A1S3Y2I3	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi10g01581\|UniProtKB=F6HVX7	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_G02621\|UniProtKB=A0A059BGE7	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A03P03820.1\|UniProtKB=A0A078J2Z5	Brassica napus	O
BRACM\|EnsemblGenome=Bra005990\|UniProtKB=M4CP52	Brassica campestris	O
ARATH\|TAIR=locus=2150788\|UniProtKB=F4KB17	Arabidopsis thaliana	O
BRACM\|EnsemblGenome=Bra009683\|UniProtKB=M4CZN6	Brassica campestris	LDO
ARATH\|TAIR=locus=2154438\|UniProtKB=Q8H0T9	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107900972\|UniProtKB=A0A1U8IVZ9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107928933\|UniProtKB=A0A1U8LR97	Gossypium hirsutum	O
GOSHI\|Gene=LOC107941001\|UniProtKB=A0A1U8MT03	Gossypium hirsutum	O
GOSHI\|Gene=LOC107908996\|UniProtKB=A0A1U8JNI0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107929783\|UniProtKB=A0A1U8LQF3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107886930\|UniProtKB=A0A1U8HRE0	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_007630\|UniProtKB=A0A061E1Y6	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g003448mg\|UniProtKB=A0A067GBL6	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_04G060400\|UniProtKB=A0A251L193	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1753460\|UniProtKB=B9RJ00	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_05G000600\|UniProtKB=K7KNR2	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_19G000400\|UniProtKB=K7MVR8	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_6g004040\|UniProtKB=A0A072U4U0	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr06_00050\|UniProtKB=A0A6P9EH02	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr06_00030\|UniProtKB=A0A2I4HM16	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G580650\|UniProtKB=A0A0A0KPN4	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G352400\|UniProtKB=M5XVH3	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_443995\|UniProtKB=D8S641	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_442850\|UniProtKB=D8RWL8	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_431447\|UniProtKB=D8TCP0	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_98102\|UniProtKB=D8RP16	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c24_18870\|UniProtKB=A0A2K1IHA9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c20_7130\|UniProtKB=A0A2K1IUD1	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0006s0181\|UniProtKB=A0A2R6XQ02	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000610190\|UniProtKB=A0A0U9HJ02	Klebsormidium nitens	LDO