PANTHER Gene Information

Gene Symbol(s):

POPTR_008G037800

Organism:

Populus trichocarpa

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Gene Name:

Lysine-specific demethylase ELF6

Gene ID:

POPTR_008G037800v3

Protein ID:

A0A2K1ZB88

Persistent Id:

PTN004185180

Alternate Ids:

A0A2K1ZB88(Synonym)	CM009297(EMBL)
POPTR_008G037800v3(Ensembl)	PNT22549(EMBL-CDS)
A0A2K1ZB88_POPTR(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	LYSINE-SPECIFIC DEMETHYLASE (PTHR10694)
PANTHER Subfamily:	LYSINE-SPECIFIC DEMETHYLASE ELF6 (PTHR10694:SF45)
PANTHER GO-slim Molecular Function:	2-oxoglutarate-dependent dioxygenase activity histone demethylase activity
PANTHER GO-slim Biological Process:	regulation of gene expression chromatin remodeling
PANTHER GO-slim Cellular Component:	nucleus chromatin
PANTHER protein class:	histone modifying enzyme

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	histone modifying activity, histone H3K4me/H3K4me2/H3K4me3 demethylase activity
GO BP Complete:	chromatin remodeling, regulation of gene expression, regulation of DNA-templated transcription
GO CC Complete:	nucleus, chromatin

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=6196\|UniProtKB=Q92833	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000017743.6\|UniProtKB=A0A2I3RU26	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000005536.4\|UniProtKB=A0A2I2Y3Q1	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000015362.4\|UniProtKB=H9FU42	Macaca mulatta	O
MOUSE\|MGI=MGI=104813\|UniProtKB=Q62315	Mus musculus	O
RAT\|RGD=1591663\|UniProtKB=M0RBV7	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000012938.6\|UniProtKB=A0A3Q1LW97	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000001061.5\|UniProtKB=A0A287AMW5	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000011721.4\|UniProtKB=A0A3Q2H8B0	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000011110.6\|UniProtKB=A0A5F5XI07	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845023372.1\|UniProtKB=A0A8I3PF17	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000010746.5\|UniProtKB=F7FWT8	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000011869.4\|UniProtKB=A0A6I8PCP8	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010009678.1\|UniProtKB=A0A8V0YBP9	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_32g20\|UniProtKB=Q5F363	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000003669.4\|UniProtKB=R4GA88	Anolis carolinensis	O
XENLA\|Gene=jarid2.S\|UniProtKB=A0A8J1L2C7	Xenopus laevis	O
XENLA\|Gene=jarid2.L\|UniProtKB=A0A1L8FY27	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-982166\|UniProtKB=A0A8J0QJD1	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000013094.3\|UniProtKB=A0A3B3H5Y1	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-061218-1\|UniProtKB=E7F6J7	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-060503-246\|UniProtKB=Q1LVC2	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000008335.1\|UniProtKB=W5MP17	lepisosteus oculatus	O
BRAFL\|Gene=LOC118418186\|UniProtKB=A0A9J7LC02	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC585046\|UniProtKB=A0A7M7N5J5	Strongylocentrotus purpuratus	O
DROME\|FlyBase=FBgn0036004\|UniProtKB=Q9VT00	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP005541\|UniProtKB=Q7PP11	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC002791\|UniProtKB=D6WIN6	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_50461\|UniProtKB=E9GI34	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW006964\|UniProtKB=B7PWB5	Ixodes scapularis	O
TRIAD\|EnsemblGenome=TriadG55681\|UniProtKB=B3RVK0	Trichoplax adhaerens	O
YEAST\|SGD=S000004788\|UniProtKB=Q03214	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AFL127C\|UniProtKB=Q755F0	Eremothecium gossypii	O
SCHPO\|PomBase=SPAC343.11c\|UniProtKB=Q9UT79	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_01465\|UniProtKB=B6JY05	Schizosaccharomyces japonicus	O
PLAF7\|EnsemblGenome=PF3D7_0809900\|UniProtKB=Q8IAT4	Plasmodium falciparum	O
PHYRM\|Gene=H3GS70_PHYRM\|UniProtKB=H3GS70	Phytophthora ramorum	O
AMBTC\|EnsemblGenome=AMTR_s00009p00114640\|UniProtKB=W1NI36	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_99G00570\|UniProtKB=A0A0K9NHA1	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma11_g01940\|UniProtKB=A0A804L380	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_033886mg\|UniProtKB=K4A4T2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G501800\|UniProtKB=A0A1B6QQG3	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb403060\|UniProtKB=A0A1D6PJY0	Zea mays	LDO
ORYSJ\|Gene_OrderedLocusName=LOC_Os03g05690\|UniProtKB=Q10RP4	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g74997v3\|UniProtKB=A0A0Q3HKZ2	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0411310\|UniProtKB=A0A8I6YAT4	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G317400\|UniProtKB=A0A3B6IVZ4	Triticum aestivum	LDO
NELNU\|Gene=LOC104595058\|UniProtKB=A0A1U7ZJ06	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110804622\|UniProtKB=A0A9R0KBV3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0662191\|UniProtKB=A0A251SKU2	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr07g0299201\|UniProtKB=A0A251UCK5	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200091850\|UniProtKB=A0A9R1XPE2	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000838mg\|UniProtKB=A0A022RI34	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_14455\|UniProtKB=A0A2G2ZHH0	Capsicum annuum	LDO
TOBAC\|Gene=LOC107785352\|UniProtKB=A0A1S3ZCI2	Nicotiana tabacum	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_G02854\|UniProtKB=A0A059BH79	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00072972001\|UniProtKB=A0A078HXB2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra009474\|UniProtKB=M4CZ27	Brassica campestris	LDO
ARATH\|TAIR=locus=2146653\|UniProtKB=Q6BDA0	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107904076\|UniProtKB=A0A1U8J654	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107957377\|UniProtKB=A0A1U8PAZ7	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_043183\|UniProtKB=A0A061FPW9	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g0003921mg\|UniProtKB=A0A067E4U4	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_09G125400\|UniProtKB=A0A2C9VCH2	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_07G097600\|UniProtKB=A0A2C9VK12	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0263520\|UniProtKB=B9T0B7	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_20G181000\|UniProtKB=I1NHH0	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G209600\|UniProtKB=I1LCZ6	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g094740\|UniProtKB=G7I511	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr07_34620\|UniProtKB=A0A2I4FAW6	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G405990\|UniProtKB=A0A0A0KHH8	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G211400\|UniProtKB=A0A251QJE6	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_440762\|UniProtKB=D8RE62	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_446733\|UniProtKB=D8STW8	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c7_8710\|UniProtKB=A0A7I4EA34	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c11_24630\|UniProtKB=A9SYV0	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0006s0237\|UniProtKB=A0A2R6XQ51	Marchantia polymorpha	LDO