PANTHER Gene Information

Gene Symbol(s):

POPTR_008G136100

Organism:

Populus trichocarpa

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Gene Name:

RNA-dependent RNA polymerase

Gene ID:

POPTR_008G136100v3

Protein ID:

B9HJH7

Persistent Id:

PTN001892821

Alternate Ids:

CM009297(EMBL)	B9HJH7(Synonym)
224099571(GI)	POPTR_008G136100v3(Ensembl)
B9HJH7_POPTR(UniProtKB-ID)	XM_002311500(refSeq)
PNT24476(EMBL-CDS)	7457809(GeneID)
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PANTHER Classification

PANTHER Family:	RNA-DEPENDENT RNA POLYMERASE (PTHR23079)
PANTHER Subfamily:	RNA-DEPENDENT RNA POLYMERASE 1 (PTHR23079:SF1)
PANTHER GO-slim Molecular Function:	5'-3' RNA polymerase activity
PANTHER GO-slim Biological Process:	siRNA processing
PANTHER GO-slim Cellular Component:	nuclear protein-containing complex RNA polymerase complex
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	nucleic acid binding, 5'-3' RNA polymerase activity, RNA binding, RNA-dependent RNA polymerase activity
GO BP Complete:	RNA-templated transcription, regulatory ncRNA-mediated gene silencing, siRNA processing
GO CC Complete:	nuclear RNA-directed RNA polymerase complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BRAFL\|Gene=LOC118427356\|UniProtKB=A0A9J7M486	Branchiostoma floridae	O
BRAFL\|Gene=LOC118420943\|UniProtKB=A0A9J7MXQ8	Branchiostoma floridae	O
BRAFL\|Gene=LOC118428502\|UniProtKB=A0A9J7M4A9	Branchiostoma floridae	O
BRAFL\|Gene=LOC118429714\|UniProtKB=A0A9J7M7H1	Branchiostoma floridae	O
BRAFL\|Gene=LOC118428503\|UniProtKB=A0A9J7M4B0	Branchiostoma floridae	O
CAEEL\|WormBase=WBGene00004510\|UniProtKB=G5EE53	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG00730\|UniProtKB=A8WN72	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00304839\|UniProtKB=A0A8R1V5S9	Pristionchus pacificus	O
CAEEL\|WormBase=WBGene00004509\|UniProtKB=G5EFA8	Caenorhabditis elegans	O
CAEEL\|WormBase=WBGene00004508\|UniProtKB=G5ECM1	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG19448\|UniProtKB=A8XVP2	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00001214\|UniProtKB=G5EBQ3	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG00321\|UniProtKB=A8WMP9	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00098113\|UniProtKB=A0A2A6BLL4	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00274061\|UniProtKB=A0A2A6BLU4	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00283817\|UniProtKB=A0A2A6CUJ9	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00271994\|UniProtKB=A0A2A6BNW3	Pristionchus pacificus	O
IXOSC\|EnsemblGenome=ISCW001005\|UniProtKB=B7P6P3	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW008905\|UniProtKB=B7Q238	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW008904\|UniProtKB=B7Q237	Ixodes scapularis	O
ASPFU\|EnsemblGenome=AFUA_5G09430\|UniProtKB=Q4WUR8	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU07534\|UniProtKB=Q1K6C4	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_03377\|UniProtKB=A7EDI7	Sclerotinia sclerotiorum	O
EMENI\|EnsemblGenome=ANIA_02717\|UniProtKB=Q5B9R3	Emericella nidulans	O
NEUCR\|EnsemblGenome=NCU08435\|UniProtKB=Q1K8P0	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_09915\|UniProtKB=A7EX56	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_15784\|UniProtKB=Q0TXM0	Phaeosphaeria nodorum	O
EMENI\|EnsemblGenome=ANIA_04790\|UniProtKB=C8VAM8	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_3G06790\|UniProtKB=Q4WWR4	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU02178\|UniProtKB=Q1K907	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_13161\|UniProtKB=A7F6D2	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_01986\|UniProtKB=Q0V1X8	Phaeosphaeria nodorum	O
PHANO\|EnsemblGenome=SNOG_14810\|UniProtKB=Q0TZW2	Phaeosphaeria nodorum	O
PHANO\|Gene_ORFName=SNOG_00237\|UniProtKB=Q0V6X7	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC6F12.09\|UniProtKB=O14227	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_03356\|UniProtKB=B6K409	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNG01230\|UniProtKB=Q5KEA1	Cryptococcus neoformans	O
PUCGT\|EnsemblGenome=PGTG_17766\|UniProtKB=E3L5E1	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_20838\|UniProtKB=H6QPF7	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_02834\|UniProtKB=E3JWG8	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_05092\|UniProtKB=E3K6D6	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_09533\|UniProtKB=E3KHP5	Puccinia graminis	O
ENTH1\|EnsemblGenome=CL6EHI_139420\|UniProtKB=C4M6W7	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0280963\|UniProtKB=Q54UI6	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_149105\|UniProtKB=F0ZCV1	Dictyostelium purpureum	O
DICDI\|dictyBase=DDB_G0289659\|UniProtKB=Q54H25	Dictyostelium discoideum	O
DICDI\|dictyBase=DDB_G0291249\|UniProtKB=Q54EH7	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_54684\|UniProtKB=F0ZI81	Dictyostelium purpureum	O
GIAIC\|EnsemblGenome=GL50803_102515\|UniProtKB=E2RTV4	Giardia intestinalis	O
PARTE\|EnsemblGenome=GSPATT00018564001\|UniProtKB=A0DMU3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00006401001\|UniProtKB=Q3SE69	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00024768001\|UniProtKB=Q3SE67	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00036857001\|UniProtKB=A0CBA7	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_22277\|UniProtKB=B8BZF0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_5028\|UniProtKB=B8C1R8	Thalassiosira pseudonana	O
AMBTC\|EnsemblGenome=AMTR_s00176p00039530\|UniProtKB=W1PVQ6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_121G00800\|UniProtKB=A0A0K9Q0S8	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma10_g29890\|UniProtKB=A0A804L1U3	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_016153mg\|UniProtKB=K3YPG1	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G246400\|UniProtKB=A0A194YRJ1	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb253860\|UniProtKB=A0A804PMR1	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0736200\|UniProtKB=Q0DXS3	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g59910v3\|UniProtKB=A0A0Q3FRJ7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0613430\|UniProtKB=Q6RFH9	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6D02G278600\|UniProtKB=A0A3B6QHK9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G298900\|UniProtKB=A0A3B6NS05	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G328300\|UniProtKB=A0A3B6PNJ8	Triticum aestivum	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0613450\|UniProtKB=A0A8I6Z3E5	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS6B02G328500\|UniProtKB=A0A3B6PPH3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G278700\|UniProtKB=A0A3B6QKS9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G299000\|UniProtKB=A0A3B6NTI9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G328400\|UniProtKB=A0A3B6PRK6	Triticum aestivum	O
NELNU\|Gene=LOC104607426\|UniProtKB=A0A1U8ATZ5	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_006440\|UniProtKB=A0A1U8B786	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110788679\|UniProtKB=A0A9R0JVV2	Spinacia oleracea	O
SPIOL\|Gene=LOC110779092\|UniProtKB=A0A9R0HYS7	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr08g0337801\|UniProtKB=A0A251U6K4	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr08g0337821\|UniProtKB=A0A251U562	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr08g0337871\|UniProtKB=A0A9K3NCJ5	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr08g0337901\|UniProtKB=A0A9K3NCF0	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200075390\|UniProtKB=A0A9R1WAE9	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C800403460\|UniProtKB=A0A9R1UWS6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000505mg\|UniProtKB=A0A022QNJ9	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_27323\|UniProtKB=A0A2G2YDL4	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400031261\|UniProtKB=M1D3A3	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400031269\|UniProtKB=M1D3B2	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc05g007510.3\|UniProtKB=Q9ZR58	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107788900\|UniProtKB=A0A1S3ZNK4	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107827981\|UniProtKB=A0A1S4DBX1	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi01g00503\|UniProtKB=F6HFC8	Vitis vinifera	O
VITVI\|Gene_OrderedLocusName=VIT_01s0011g05880\|UniProtKB=F6HFC7	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B02678\|UniProtKB=A0A059D5Y5	Eucalyptus grandis	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B02683\|UniProtKB=A0A059D6G4	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_G02093\|UniProtKB=A0A059BE60	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_B02681\|UniProtKB=A0A059D697	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_G020871\|UniProtKB=A0A059BEN5	Eucalyptus grandis	O
BRANA\|Gene_ORFName=GSBRNA2T00072443001\|UniProtKB=A0A078HTC7	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00044156001\|UniProtKB=A0A078JEH3	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A06P10850.1\|UniProtKB=A0A078I346	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra026187\|UniProtKB=M4EBM8	Brassica campestris	LDO
ARATH\|TAIR=locus=2006822\|UniProtKB=Q9LQV2	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107913503\|UniProtKB=A0A1U8K559	Gossypium hirsutum	O
GOSHI\|Gene=LOC107920197\|UniProtKB=A0A1U8KWV9	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_038703\|UniProtKB=A0A061GRC0	Theobroma cacao	O
THECC\|EnsemblGenome=TCM_011293\|UniProtKB=A0A061EAG0	Theobroma cacao	O
THECC\|EnsemblGenome=TCM_011292\|UniProtKB=A0A061EGF4	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g035741mg\|UniProtKB=A0A067EDY3	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g0037892mg\|UniProtKB=A0A067E8E8	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_15G135600\|UniProtKB=A0A2C9UFK1	Manihot esculenta	LDO
SOYBN\|EnsemblGenome=GLYMA_07G171400\|UniProtKB=I1KKW7	Glycine max	O
MEDTR\|EnsemblGenome=MTR_1g032590\|UniProtKB=A0A072VF26	Medicago truncatula	O
SOYBN\|EnsemblGenome=GLYMA_02G086100\|UniProtKB=K7K760	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g032720\|UniProtKB=A0A072VF36	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_1g032630\|UniProtKB=A0A072VR80	Medicago truncatula	LDO
MEDTR\|EnsemblGenome=MTR_1g032610\|UniProtKB=A0A072VFQ4	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_1g032710\|UniProtKB=A0A072VGT2	Medicago truncatula	O
JUGRE\|Gene=LOC109009256\|UniProtKB=A0A6P9EV89	Juglans regia	O
JUGRE\|EnsemblGenome=Jr16_06830\|UniProtKB=A0A2I4GH09	Juglans regia	O
JUGRE\|EnsemblGenome=Jr16_06770\|UniProtKB=A0A2I4E5F3	Juglans regia	O
JUGRE\|Gene=LOC108983627\|UniProtKB=A0A6P9EHP6	Juglans regia	O
JUGRE\|EnsemblGenome=Jr16_06870\|UniProtKB=A0A2I4HKM5	Juglans regia	O
JUGRE\|Gene=LOC109005682\|UniProtKB=A0A6P9E5R3	Juglans regia	O
JUGRE\|Gene=LOC109019853\|UniProtKB=A0A6P9E3H9	Juglans regia	O
JUGRE\|EnsemblGenome=Jr16_06850\|UniProtKB=A0A2I4GH03	Juglans regia	O
JUGRE\|EnsemblGenome=Jr16_06890\|UniProtKB=A0A2I4HKG2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G239640\|UniProtKB=E9NWK7	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_5G239140\|UniProtKB=A0A0A0KSM9	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G132100\|UniProtKB=A0A251QWK1	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_4G078900\|UniProtKB=M5WJ86	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_4G078800\|UniProtKB=A0A251PHC3	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_1G334500\|UniProtKB=M5Y326	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_1G332600\|UniProtKB=A0A251R703	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_1G334600\|UniProtKB=A0A251R742	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_126929\|UniProtKB=D8SX78	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_448382\|UniProtKB=D8T6W0	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_150191\|UniProtKB=D8RV28	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_235652\|UniProtKB=D8T053	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c24_15800\|UniProtKB=A0A7I4CK47	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0189s0015\|UniProtKB=A0A2R6W1C2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0061s0115\|UniProtKB=A0A2R6WSP5	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000630360\|UniProtKB=A0A1Y1HQC0	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_002820020\|UniProtKB=A0A1Y1IC39	Klebsormidium nitens	O