PANTHER Gene Information

Gene Symbol(s):

POPTR_008G172100

Organism:

Populus trichocarpa

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Gene Name:

RRM domain-containing protein

Gene ID:

POPTR_008G172100v3

Protein ID:

A9PFU9

Persistent Id:

PTN002366234

Alternate Ids:

A9PFU9_POPTR(UniProtKB-ID)	A9PFU9(Synonym)
118486835(GI)	XP_002311696(refSeq)
CM009297(EMBL)	POPTR_008G172100v3(Ensembl)
7480891(GeneID)	ABK95252(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	OS02G0815200 PROTEIN (PTHR48025)
PANTHER Subfamily:	OS02G0815200 PROTEIN (PTHR48025:SF9)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	rRNA processing
PANTHER GO-slim Cellular Component:	chloroplast thylakoid membrane
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, mRNA binding
GO BP Complete:	chloroplast rRNA processing, mRNA processing
GO CC Complete:	chloroplast, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BOVIN\|Gene=RBM14\|UniProtKB=Q5EA36	Bos taurus	O
XENLA\|Gene=rbm14.L\|UniProtKB=Q32N78	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-491627\|UniProtKB=Q6P885	Xenopus tropicalis	O
HORSE\|Ensembl=ENSECAG00000022361.4\|UniProtKB=A0A9L0RBP3	Equus caballus	O
XENLA\|Gene=tial1.L\|UniProtKB=A0A1L8FIA8	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000045788\|UniProtKB=Q28BS8	Xenopus tropicalis	O
XENLA\|Gene=tia1.L\|UniProtKB=Q68EU5	Xenopus laevis	O
XENTR\|Gene=tia1\|UniProtKB=A0A8J0SI21	Xenopus tropicalis	O
HUMAN\|HGNC=17940\|UniProtKB=Q9P2K5	Homo sapiens	O
HUMAN\|HGNC=5046\|UniProtKB=P52272	Homo sapiens	O
RAT\|RGD=1306891\|UniProtKB=D4A1W5	Rattus norvegicus	O
MONDO\|Ensembl=ENSMODG00000005250.4\|UniProtKB=A0A5F8GJ19	Monodelphis domestica	O
ANOCA\|Ensembl=ENSACAG00000041135.1\|UniProtKB=A0A803SNY1	Anolis carolinensis	O
XENLA\|Gene=tdrd10.L\|UniProtKB=A0A8J1LJJ0	Xenopus laevis	O
XENTR\|Gene=tdrd10\|UniProtKB=A0A8J0R8L7	Xenopus tropicalis	O
XENLA\|Gene=rbm4b.L\|UniProtKB=Q640I0	Xenopus laevis	O
XENLA\|Gene=rbm4b.S\|UniProtKB=Q6GPD7	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-494431\|UniProtKB=Q6P4L3	Xenopus tropicalis	O
LEPOC\|Ensembl=ENSLOCG00000002772.1\|UniProtKB=W5M4F1	lepisosteus oculatus	O
BRAFL\|Gene=LOC118431372\|UniProtKB=A0A9J7MCP0	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC586576\|UniProtKB=A0A7M7HPC9	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00022771\|UniProtKB=D0G911	Caenorhabditis elegans	O
ANOGA\|EnsemblGenome=AGAP028511\|UniProtKB=A0A0E4G8F0	Anopheles gambiae	O
IXOSC\|EnsemblGenome=ISCW021980\|UniProtKB=B7QFY7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG73589\|UniProtKB=T1G1G2	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g246176\|UniProtKB=A7SMB3	Nematostella vectensis	O
SCHJY\|EnsemblGenome=SJAG_01469\|UniProtKB=B6JY09	Schizosaccharomyces japonicus	O
SCHJY\|EnsemblGenome=SJAG_03283\|UniProtKB=B6K3U2	Schizosaccharomyces japonicus	O
USTMA\|EnsemblGenome=UMAG_00254\|UniProtKB=A0A0D1E7F4	Ustilago maydis	O
USTMA\|EnsemblGenome=UMAG_10723\|UniProtKB=A0A0D1DR22	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_13383\|UniProtKB=E3KS89	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_00626\|UniProtKB=E3JQH9	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_22812\|UniProtKB=F4NVV2	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0284167\|UniProtKB=Q54Q30	Dictyostelium discoideum	O
TRIV3\|Gene_ORFName=TVAG_043050\|UniProtKB=A2F6R9	Trichomonas vaginalis	O
AMBTC\|EnsemblGenome=AMTR_s00002p00271280\|UniProtKB=W1P0S9	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_393G00040\|UniProtKB=A0A0K9P6H9	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma05_g17350\|UniProtKB=A0A804J5H5	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_017901mg\|UniProtKB=K3YUF5	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G343000\|UniProtKB=C5XVU6	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb258730\|UniProtKB=A0A1D6HP86	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0815200\|UniProtKB=Q6K6C4	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g55190v3\|UniProtKB=I1IDU7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0628900\|UniProtKB=F2CY27	Hordeum vulgare subsp. vulgare	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr06g0272921\|UniProtKB=A0A251UKS3	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a011502mg\|UniProtKB=A0A022RUV4	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107832323\|UniProtKB=A0A1S4DQD1	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi05g00834\|UniProtKB=D7SZP1	Vitis vinifera	LDO
BRACM\|EnsemblGenome=Bra027821\|UniProtKB=M4EGA7	Brassica campestris	LDO
ARATH\|TAIR=locus=2202740\|UniProtKB=Q9ZUJ3	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107932168\|UniProtKB=A0A1U8LYH1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107940137\|UniProtKB=A0A1U8MQF1	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_021006\|UniProtKB=A0A061EMY4	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g030975mg\|UniProtKB=A0A067EIH8	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g032066mg\|UniProtKB=A0A067DCS5	Citrus sinensis	LDO
RICCO\|Gene_ORFName=RCOM_1217370\|UniProtKB=B9SQT1	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_10G134100\|UniProtKB=I1LAQ5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_20G082800\|UniProtKB=C6TJX8	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g045510\|UniProtKB=G7I6P1	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_3G134590\|UniProtKB=A0A0A0L496	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G048800\|UniProtKB=A0A251QSM2	Prunus persica	LDO
PHYPA\|EnsemblGenome=Pp3c24_17170\|UniProtKB=A0A2K1IH50	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c13_15440\|UniProtKB=A0A7I4AKX9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c24_17150\|UniProtKB=A0A2K1IH48	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_16740\|UniProtKB=A0A2K1K7L6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c12_9890\|UniProtKB=A0A2K1JQ71	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0006s0092\|UniProtKB=A0A2R6XPL7	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0042s0009\|UniProtKB=A0A2R6X1G2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0168s0008\|UniProtKB=A0A2R6W3A4	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0183s0014\|UniProtKB=A0A2R6W1T2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0012s0133\|UniProtKB=A0A2R6XJB8	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000500340\|UniProtKB=A0A1Y1HTE6	Klebsormidium nitens	O