PANTHER Gene Information

Gene Symbol(s):

POPTR_012G038200

Organism:

Populus trichocarpa

View Gene in Tree

Tree

Gene Name:

RRM domain-containing protein

Gene ID:

POPTR_012G038200v3

Protein ID:

B9I4X6

Persistent Id:

PTN002690223

Alternate Ids:

XM_002318295(refSeq)	B9I4X6_POPTR(UniProtKB-ID)
POPTR_012G038200v3(Ensembl)	224120444(GI)
PNT09301(EMBL-CDS)	CM009301(EMBL)
B9I4X6(Synonym)	7485193(GeneID)
Show All

PANTHER Classification

PANTHER Family:	NUCLEOLAR PROTEIN 8 (PTHR48029)
PANTHER Subfamily:	NUCLEOLAR PROTEIN 8 (PTHR48029:SF1)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	chloroplast mRNA modification, cytidine to uridine editing
GO CC Complete:	chloroplast

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000044749.1\|UniProtKB=A0A2I3RS46	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000023838.2\|UniProtKB=G3SEH5	Gorilla gorilla gorilla	O
HUMAN\|HGNC=23387\|UniProtKB=Q76FK4	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000021109.6\|UniProtKB=H2QXG3	Pan troglodytes	LDO
MACMU\|Ensembl=ENSMMUG00000004629.4\|UniProtKB=A0A5F7ZRF0	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1918180\|UniProtKB=Q3UHX0	Mus musculus	LDO
RAT\|RGD=1309551\|UniProtKB=A0A1W2Q629	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000018613.6\|UniProtKB=F1MRB9	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000008069.5\|UniProtKB=A0A480JUS0	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000022362.4\|UniProtKB=A0A5F5Q109	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000000818.6\|UniProtKB=M3VVG7	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845000064.1\|UniProtKB=A0A8I3MJN1	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000020877.5\|UniProtKB=H9H7P4	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000015102.4\|UniProtKB=F7BVH2	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010027207.1\|UniProtKB=A0A8V1A7W3	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000009201.4\|UniProtKB=A0A803T5G0	Anolis carolinensis	LDO
XENLA\|Gene=nol8.L\|UniProtKB=A0A1L8GP17	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-6258524\|UniProtKB=F6QZZ9	Xenopus tropicalis	LDO
DANRE\|Gene=nol8\|UniProtKB=A0A8M2BLC0	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000013864.1\|UniProtKB=W5N8Y8	lepisosteus oculatus	LDO
STRPU\|EnsemblGenome=LOC575561\|UniProtKB=A0A7M7MYD2	Strongylocentrotus purpuratus	LDO
ANOGA\|EnsemblGenome=AGAP005505\|UniProtKB=A0A1S4GQ28	Anopheles gambiae	LDO
ANOGA\|EnsemblGenome=AGAP011041\|UniProtKB=Q7QK18	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP001261\|UniProtKB=Q7PX78	Anopheles gambiae	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_114239\|UniProtKB=E9HHH6	Daphnia pulex	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g117324\|UniProtKB=A7SGF9	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG56401\|UniProtKB=B3RY12	Trichoplax adhaerens	LDO
SCHPO\|PomBase=SPBP16F5.06\|UniProtKB=Q9HFE6	Schizosaccharomyces pombe	LDO
PUCGT\|EnsemblGenome=PGTG_05589\|UniProtKB=E3K4V3	Puccinia graminis	LDO
PUCGT\|EnsemblGenome=PGTG_22380\|UniProtKB=H6QUC8	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_92630\|UniProtKB=F4PDS8	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_174980\|UniProtKB=C4LZM3	Entamoeba histolytica	LDO
GIAIC\|EnsemblGenome=GL50803_93463\|UniProtKB=A8BKX1	Giardia intestinalis	LDO
AMBTC\|EnsemblGenome=AMTR_s00044p00073410\|UniProtKB=U5D6P8	Amborella trichopoda	LDO
MUSAM\|EnsemblGenome=Ma05_g15770\|UniProtKB=A0A804J4U9	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_011250mg\|UniProtKB=K3YAK8	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G192000\|UniProtKB=A0A1B6PMW1	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb428060\|UniProtKB=A0A1D6JBP2	Zea mays	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0625381\|UniProtKB=A0A251SFA2	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014503mg\|UniProtKB=A0A022PPX5	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107773500\|UniProtKB=A0A1S3Y8R1	Nicotiana tabacum	O
TOBAC\|Gene=LOC107821702\|UniProtKB=A0A1S4CRD6	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_17s0053g00760\|UniProtKB=F6HVU8	Vitis vinifera	LDO
BRACM\|EnsemblGenome=Bra003841\|UniProtKB=M4CI08	Brassica campestris	LDO
ARATH\|TAIR=locus=2206850\|UniProtKB=Q9FX45	Arabidopsis thaliana	LDO
CITSI\|Gene_ORFName=CISIN_1g030819mg\|UniProtKB=A0A067DZP3	Citrus sinensis	LDO
SOYBN\|EnsemblGenome=GLYMA_09G167800\|UniProtKB=K7LEC4	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_16G217600\|UniProtKB=C6SVN2	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_6g477870\|UniProtKB=A0A072UCT4	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr06_16880\|UniProtKB=A0A2I4GYY2	Juglans regia	O
JUGRE\|EnsemblGenome=Jr06_16890\|UniProtKB=A0A2I4GYX8	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G032430\|UniProtKB=A0A0A0LQB8	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G241100\|UniProtKB=A0A251PD24	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_448813\|UniProtKB=D8TAE1	Selaginella moellendorffii	LDO
KLENI\|Gene_ORFName=KFL_001470210\|UniProtKB=A0A1Y1HXN5	Klebsormidium nitens	LDO