PANTHER Gene Information

Gene Symbol(s):

POPTR_013G154200

Organism:

Populus trichocarpa

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Gene Name:

Pseudouridine synthase I TruA alpha_beta domain-containing protein

Gene ID:

POPTR_013G154200v3

Protein ID:

B9I6V0

Persistent Id:

PTN007491057

Alternate Ids:

B9I6V0_POPTR(UniProtKB-ID)	B9I6V0(Synonym)
POPTR_013G154200v3(Ensembl)	PNT08489(EMBL-CDS)
CM009302(EMBL)
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PANTHER Classification

PANTHER Family:	PSEUDOURIDYLATE SYNTHASE (PTHR11142)
PANTHER Subfamily:	TRNA PSEUDOURIDINE SYNTHASE-RELATED (PTHR11142:SF9)
PANTHER GO-slim Molecular Function:	intramolecular transferase activity
PANTHER GO-slim Biological Process:	mRNA modification pseudouridine synthesis tRNA modification
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:	lyase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding, pseudouridine synthase activity, isomerase activity
GO BP Complete:	tRNA pseudouridine synthesis, mRNA pseudouridine synthesis
GO CC Complete:	nucleus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=15508\|UniProtKB=Q9Y606	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000005643.6\|UniProtKB=A0A2I3RQB0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000009178.3\|UniProtKB=G3R1B2	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000031463.3\|UniProtKB=H9Z2E9	Macaca mulatta	O
MOUSE\|MGI=MGI=1929237\|UniProtKB=Q9WU56	Mus musculus	O
RAT\|RGD=1311871\|UniProtKB=Q4KM92	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000012990.6\|UniProtKB=E1BDL3	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000009741.5\|UniProtKB=A0A8D0NHD1	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000006965.4\|UniProtKB=F7E3A6	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000010780.5\|UniProtKB=A0A5F5Y4Z8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845028826.1\|UniProtKB=A0A8I3Q168	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000015551.4\|UniProtKB=F6SK59	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000036346.1\|UniProtKB=A0A6I8NFR3	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010022824.1\|UniProtKB=A0A8V0ZXM5	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000007367.3\|UniProtKB=H9GCL0	Anolis carolinensis	O
XENLA\|Gene=LOC108710302\|UniProtKB=A0A8J1MMU2	Xenopus laevis	O
XENTR\|Gene=LOC100490752\|UniProtKB=A0A8J1JB33	Xenopus tropicalis	O
XENLA\|Gene=pus1.S\|UniProtKB=A0A1L8HQI8	Xenopus laevis	O
ORYLA\|Ensembl=ENSORLG00000010787.2\|UniProtKB=H2M509	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-041212-26\|UniProtKB=F1QWW1	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000006127.1\|UniProtKB=W5MG95	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000009426.3\|UniProtKB=F6TLE4	Ciona intestinalis	O
BRAFL\|Gene=LOC118414921\|UniProtKB=A0A9J7MNZ8	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC591551\|UniProtKB=A0A7M7NWQ4	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00004248\|UniProtKB=Q9XXN0	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00042138\|UniProtKB=A8WJJ2	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00118285\|UniProtKB=A0A8R1UJ34	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0038811\|UniProtKB=E1JIR1	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP002409\|UniProtKB=A0A1S4GES6	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC004829\|UniProtKB=D6WB40	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_12957\|UniProtKB=E9GZJ2	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW006672\|UniProtKB=B7PNI3	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG154673\|UniProtKB=T1ELF5	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g32495\|UniProtKB=A7RII9	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG57795\|UniProtKB=B3S1D9	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_32742\|UniProtKB=A9V1F3	Monosiga brevicollis	O
YEAST\|SGD=S000003031\|UniProtKB=P53167	Saccharomyces cerevisiae	O
YEAST\|SGD=S000006133\|UniProtKB=Q12211	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AFL105C\|UniProtKB=Q755C8	Eremothecium gossypii	O
CANAL\|CGD=CAL0000183350\|UniProtKB=Q59S63	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_C12749g\|UniProtKB=Q6CC39	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_06165\|UniProtKB=Q5AZW5	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_2G08460\|UniProtKB=Q4X1X3	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU07528\|UniProtKB=U9W3P8	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_08914\|UniProtKB=A7EUA7	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_13015\|UniProtKB=Q0U5E9	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBC887.11\|UniProtKB=O94295	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00319\|UniProtKB=B6JVB2	Schizosaccharomyces japonicus	O
SCHPO\|PomBase=SPCC16C4.06c\|UniProtKB=O74451	Schizosaccharomyces pombe	O
SCHPO\|PomBase=SPCC126.03\|UniProtKB=O94396	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00088\|UniProtKB=B6JUY9	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNN00820\|UniProtKB=Q5K777	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_05416\|UniProtKB=A0A0D1DV38	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_16662\|UniProtKB=E3L261	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_33866\|UniProtKB=F4NRC0	Batrachochytrium dendrobatidis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_87010\|UniProtKB=F4NY14	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_179010\|UniProtKB=C4LUW4	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0286567\|UniProtKB=Q54LM5	Dictyostelium discoideum	O
DICDI\|dictyBase=DDB_G0281619\|UniProtKB=Q54TQ3	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_156689\|UniProtKB=F0ZX60	Dictyostelium purpureum	O
DICDI\|dictyBase=DDB_G0290987\|UniProtKB=Q54FA0	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_45589\|UniProtKB=F0ZAZ5	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_34_0310\|UniProtKB=Q4Q3H7	Leishmania major	LDO
CHLRE\|EnsemblGenome=CHLRE_16g691900v5\|UniProtKB=A0A2K3CSL6	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_03g152950v5\|UniProtKB=A0A2K3DVV0	Chlamydomonas reinhardtii	LDO
MUSAM\|EnsemblGenome=Ma06_g34260\|UniProtKB=A0A804JNK2	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_035199mg\|UniProtKB=K4A8J3	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G379200\|UniProtKB=C5X0R7	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb016190\|UniProtKB=B4FLR5	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0338600\|UniProtKB=Q10LR0	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g63050v3\|UniProtKB=I1H5P7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0378050\|UniProtKB=A0A8I7B776	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G167800\|UniProtKB=A0A3B6ISL0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G136700\|UniProtKB=A0A3B6HRE4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4D02G170500\|UniProtKB=A0A3B6JI64	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_027870\|UniProtKB=A0A1U7ZRU0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110790918\|UniProtKB=A0A9R0JY43	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr08g0344771\|UniProtKB=A0A251U833	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900462250\|UniProtKB=A0A9R1WVU6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a004890mg\|UniProtKB=A0A022S0A4	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc09g056260.3\|UniProtKB=A0A3Q7I1Y2	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107810419\|UniProtKB=A0A1S4BPC3	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi06g00764\|UniProtKB=F6GUG3	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J03050\|UniProtKB=A0A059AID4	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C03P19940.1\|UniProtKB=A0A078GF73	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra022789\|UniProtKB=A0A397ZV70	Brassica campestris	LDO
ARATH\|TAIR=locus=2065748\|UniProtKB=O22928	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107935045\|UniProtKB=A0A1U8M8C4	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107927029\|UniProtKB=A0A1U8LJ70	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_042258\|UniProtKB=A0A061H0E8	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g009253mg\|UniProtKB=A0A067EEE2	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_18G138800\|UniProtKB=A0A2C9U302	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1135680\|UniProtKB=B9RVG5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_02G233600\|UniProtKB=K7KAB0	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g074640\|UniProtKB=G7KFJ8	Medicago truncatula	LDO
SOYBN\|EnsemblGenome=GLYMA_U039500\|UniProtKB=I1JSA0	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_02G233500\|UniProtKB=K7KAA8	Glycine max	O
MEDTR\|EnsemblGenome=MTR_5g074620\|UniProtKB=G7KFJ6	Medicago truncatula	O
JUGRE\|Gene=LOC108983919\|UniProtKB=A0A6P9EUP6	Juglans regia	O
JUGRE\|EnsemblGenome=Jr14_07910\|UniProtKB=A0A2I4F9X1	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G533680\|UniProtKB=A0A0A0M0Z2	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G045100\|UniProtKB=M5WP30	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_63437\|UniProtKB=D8QP88	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_117791\|UniProtKB=D8SIT9	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_97541\|UniProtKB=D8RMK1	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c2_21310\|UniProtKB=A0A2K1L2I0	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0146s0022\|UniProtKB=A0A2R6W5S6	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001520020\|UniProtKB=A0A1Y1I0P1	Klebsormidium nitens	LDO
PYRAE\|EnsemblGenome=PAE1142\|UniProtKB=Q8ZXR6	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_0208\|UniProtKB=Q8TU65	Methanosarcina acetivorans	O
METJA\|EnsemblGenome=MJ_1675\|UniProtKB=Q59069	Methanocaldococcus jannaschii	O
HALSA\|EnsemblGenome=VNG_2003G\|UniProtKB=Q9HNP6	Halobacterium salinarum	O
THEKO\|EnsemblGenome=TK0927\|UniProtKB=Q5JI92	Thermococcus kodakaraensis	O
CHLAA\|EnsemblGenome=Caur_2398\|UniProtKB=A9WH95	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4731\|UniProtKB=O86776	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv3455c\|UniProtKB=P9WHP9	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_182\|UniProtKB=P47428	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO1914\|UniProtKB=A5I338	Clostridium botulinum	O
BACCR\|EnsemblGenome=BC_0471\|UniProtKB=Q813Z9	Bacillus cereus	O
CLOBH\|Gene_OrderedLocusName=CBO3447\|UniProtKB=A5I7H2	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr1451\|UniProtKB=Q8CWQ1	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02480\|UniProtKB=Q2FW37	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00676\|UniProtKB=Q8Y457	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01480\|UniProtKB=P70973	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0163\|UniProtKB=Q814C2	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1574\|UniProtKB=Q9X1R0	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_2290\|UniProtKB=Q9RS37	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC91510\|UniProtKB=Q7MBB9	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17323\|UniProtKB=P73295	Synechocystis	O
LEPIN\|EnsemblGenome=LA_2740\|UniProtKB=Q8CXS6	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_4237\|UniProtKB=Q89ZY4	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_463\|UniProtKB=O84469	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB2676\|UniProtKB=Q7TU07	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_749\|UniProtKB=O66953	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1546\|UniProtKB=B5YGE4	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1013\|UniProtKB=B8E1G5	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1600\|UniProtKB=Q8R601	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_0361\|UniProtKB=P56144	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB2036\|UniProtKB=Q9JXI2	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2877\|UniProtKB=P60350	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC53372\|UniProtKB=Q89BP1	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0892\|UniProtKB=Q4AAX9	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_1644\|UniProtKB=P45291	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_3068\|UniProtKB=K4PSU2	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0999\|UniProtKB=Q9KTA4	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC2546\|UniProtKB=Q8P7R5	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA3114\|UniProtKB=O87016	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2368\|UniProtKB=Q8ZNB9	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_2398\|UniProtKB=Q8ZD27	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAA16175\|UniProtKB=P07649	Escherichia coli	O