PANTHER Gene Information

Gene Symbol(s):

POPTR_014G028100

Organism:

Populus trichocarpa

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Gene Name:

THO complex subunit 5B

Gene ID:

POPTR_014G028100v3

Protein ID:

B9I8I0

Persistent Id:

PTN002297717

Alternate Ids:

B9I8I0(Synonym)	B9I8I0_POPTR(UniProtKB-ID)
7464925(GeneID)	XP_002320787(refSeq)
POPTR_014G028100v3(Ensembl)	566202101(GI)
PNT02707(EMBL-CDS)	CM009303(EMBL)
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PANTHER Classification

PANTHER Family:	FMS INTERACTING PROTEIN (PTHR13375)
PANTHER Subfamily:	THO COMPLEX SUBUNIT 5 HOMOLOG (PTHR13375:SF3)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	mRNA export from nucleus
PANTHER GO-slim Cellular Component:	THO complex transcription export complex
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	mRNA binding
GO BP Complete:	mRNA export from nucleus
GO CC Complete:	nucleus, THO complex part of transcription export complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=19074\|UniProtKB=Q13769	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000014225.5\|UniProtKB=H2R061	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000003767.3\|UniProtKB=A0A2I2YMU5	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000023552.4\|UniProtKB=G7N3J4	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1351333\|UniProtKB=Q8BKT7	Mus musculus	LDO
RAT\|RGD=1304991\|UniProtKB=Q68FX7	Rattus norvegicus	LDO
BOVIN\|Gene=THOC5\|UniProtKB=A4IFQ0	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000013150.6\|UniProtKB=A0A140T8B2	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005023335.1\|UniProtKB=A0A287AR63	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000011444.4\|UniProtKB=A0A3Q2KXM0	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000004247.6\|UniProtKB=M3W1U7	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845030679.1\|UniProtKB=A0A8I3SCS3	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000008971.4\|UniProtKB=F7G201	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000005901.3\|UniProtKB=F6V6S4	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010000186.1\|UniProtKB=A0A8V0WZM2	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_17i18\|UniProtKB=Q5ZJK1	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000009009.3\|UniProtKB=H9GES1	Anolis carolinensis	LDO
XENLA\|Gene=thoc5-b\|UniProtKB=Q7ZXA8	Xenopus laevis	O
XENLA\|Gene=thoc5.S\|UniProtKB=A0A8J0TT92	Xenopus laevis	O
XENLA\|Gene=thoc5.L\|UniProtKB=A0A8J0UDV0	Xenopus laevis	LDO
XENLA\|Gene=thoc5-a\|UniProtKB=Q6DFL5	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1015168\|UniProtKB=Q28DG8	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000008389.2\|UniProtKB=H2LWP6	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-3789\|UniProtKB=Q6NY52	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000008401.1\|UniProtKB=W5MPA3	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118426133\|UniProtKB=A0A9J7LYD4	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC593673\|UniProtKB=A0A7M7P9S1	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00021311\|UniProtKB=C2BR94	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00042734\|UniProtKB=A8WL86	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0034939\|UniProtKB=Q9W1F4	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP004746\|UniProtKB=A0A1S4GM06	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC005538\|UniProtKB=D6WXN9	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_314566\|UniProtKB=E9G6K8	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW018722\|UniProtKB=B7PKR7	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG186112\|UniProtKB=T1FNN7	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g167837\|UniProtKB=A7S8S8	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG59730\|UniProtKB=B3S699	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_32095\|UniProtKB=A9UXD9	Monosiga brevicollis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_85286\|UniProtKB=F4NTV4	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0288355\|UniProtKB=Q1ZXD7	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_157863\|UniProtKB=F1A069	Dictyostelium purpureum	LDO
DICDI\|dictyBase=DDB_G0267642\|UniProtKB=Q55GJ8	Dictyostelium discoideum	O
THAPS\|EnsemblGenome=THAPSDRAFT_24177\|UniProtKB=B8C9F5	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3H1R4_PHYRM\|UniProtKB=H3H1R4	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_17g705550v5\|UniProtKB=A0A2K3CPA3	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00076p00023200\|UniProtKB=W1PAD1	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_25G01280\|UniProtKB=A0A0K9PF87	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma05_g05450\|UniProtKB=A0A804J193	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_016348mg\|UniProtKB=K3YQ06	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G309900\|UniProtKB=C5XSV7	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb255990\|UniProtKB=A0A804PNQ0	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0767100\|UniProtKB=Q6Z308	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g57940v3\|UniProtKB=A0A0Q3QJK7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0619540\|UniProtKB=A0A8I6YFR3	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6D02G311700\|UniProtKB=A0A3B6QIZ2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G363200\|UniProtKB=A0A3B6PSV6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G332800\|UniProtKB=A0A3B6NT49	Triticum aestivum	LDO
NELNU\|Gene=LOC104606243\|UniProtKB=A0A1U8B1A0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110786718\|UniProtKB=A0A9R0JUG1	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr02g0055691\|UniProtKB=A0A251VE67	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C100009030\|UniProtKB=A0A9R1XU81	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a001495mg\|UniProtKB=A0A022R752	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_32924\|UniProtKB=A0A1U8GL03	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400007967\|UniProtKB=M1ADQ6	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc04g078830.3\|UniProtKB=A0A3Q7H235	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107824388\|UniProtKB=A0A1S4CZP7	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107794354\|UniProtKB=A0A1S4A6T8	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi18g00783\|UniProtKB=F6H1D0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_F02336\|UniProtKB=A0A059BRZ1	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C06P01470.1\|UniProtKB=A0A078FRK4	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00046807001\|UniProtKB=A0A078JIG2	Brassica napus	O
BRACM\|EnsemblGenome=Bra040261\|UniProtKB=M4FGN3	Brassica campestris	O
ARATH\|TAIR=locus=1005716682\|UniProtKB=F4HRC1	Arabidopsis thaliana	O
BRANA\|Gene_ORFName=DARMORV10_A06P48170.1\|UniProtKB=A0A078GBC1	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra033650\|UniProtKB=M4EXW1	Brassica campestris	LDO
ARATH\|TAIR=locus=2160006\|UniProtKB=F4K4J0	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107958125\|UniProtKB=A0A1U8PDR3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107905576\|UniProtKB=A0A1U8JG93	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_033823\|UniProtKB=A0A061FCH6	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g004474mg\|UniProtKB=A0A067GWP6	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_18G038000\|UniProtKB=A0A2C9U1W6	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1590240\|UniProtKB=B9R7B4	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_14G083300\|UniProtKB=I1M8M9	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_17G241800\|UniProtKB=I1MXN6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G039400\|UniProtKB=I1JTK1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_06G040600\|UniProtKB=I1K802	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g101790\|UniProtKB=G7J6E4	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr15_04980\|UniProtKB=A0A2I4DF75	Juglans regia	O
JUGRE\|EnsemblGenome=Jr06_06700\|UniProtKB=A0A2I4HWY6	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G639830\|UniProtKB=A0A0A0KZS2	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G434400\|UniProtKB=M5XK81	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_169328\|UniProtKB=D8RA25	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_82087\|UniProtKB=D8QZ32	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c7_25670\|UniProtKB=A0A2K1KD30	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0012s0112\|UniProtKB=A0A2R6XJB1	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_003200050\|UniProtKB=A0A1Y1I8Q1	Klebsormidium nitens	LDO