PANTHER Gene Information

Gene Symbol(s):

POPTR_016G079800

Organism:

Populus trichocarpa

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Tree

Gene Name:

50S ribosomal protein L23, chloroplastic

Gene ID:

POPTR_016G079800v3

Protein ID:

A0A2K1XCH0

Persistent Id:

PTN007519934

Alternate Ids:

PNS98482(EMBL-CDS)	A0A2K1XCH0(Synonym)
POPTR_016G079800v3(Ensembl)	CM009305(EMBL)
A0A2K1XCH0_POPTR(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	60S RIBOSOMAL PROTEIN L23A (PTHR11620)
PANTHER Subfamily:	60S RIBOSOMAL PROTEIN L23A (PTHR11620:SF105)
PANTHER GO-slim Molecular Function:	structural constituent of ribosome
PANTHER GO-slim Biological Process:	ribosomal large subunit assembly
PANTHER GO-slim Cellular Component:	cytosolic large ribosomal subunit
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	structural constituent of ribosome, mRNA binding, rRNA binding
GO BP Complete:	translation
GO CC Complete:	cytosolic large ribosomal subunit, ribosome, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000029329.3\|UniProtKB=A0A2I3SR78	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000039527.1\|UniProtKB=A0A2I2YSN0	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000025513.2\|UniProtKB=G3SC74	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000032340.3\|UniProtKB=F6TYF1	Macaca mulatta	O
MACMU\|Ensembl=ENSMMUG00000061524.1\|UniProtKB=A0A5F8ACU3	Macaca mulatta	O
MACMU\|Ensembl=ENSMMUG00000056821.1\|UniProtKB=A0A5F8ABB8	Macaca mulatta	O
BOVIN\|Ensembl=ENSBTAG00000027723.5\|UniProtKB=F1N302	Bos taurus	O
CANLF\|Ensembl=ENSCAFG00845003784.1\|UniProtKB=A0A8I3MTZ2	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000023931.2\|UniProtKB=F7FLC9	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000001044.3\|UniProtKB=F6ZEW7	Monodelphis domestica	O
CHICK\|Ensembl=ENSGALG00010029218.1\|UniProtKB=A0A8V1AGP8	Gallus gallus	O
MACMU\|Ensembl=ENSMMUG00000058380.1\|UniProtKB=A0A5F7Z8J8	Macaca mulatta	O
RAT\|RGD=15003394\|UniProtKB=A0A0G2JU90	Rattus norvegicus	O
RAT\|RGD=1565170\|UniProtKB=D3ZTX9	Rattus norvegicus	O
FELCA\|Ensembl=ENSFCAG00000025556.3\|UniProtKB=M3WVG8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845028720.1\|UniProtKB=A0A8I3S6U6	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845022974.1\|UniProtKB=A0A8I3PTW2	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845009261.1\|UniProtKB=A0A8I3RWN5	Canis lupus familiaris	O
PANTR\|Ensembl=ENSPTRG00000049531.1\|UniProtKB=A0A2I3RUW8	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000028036.2\|UniProtKB=G3S0R5	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000030042.3\|UniProtKB=F7GX65	Macaca mulatta	O
RAT\|RGD=1591759\|UniProtKB=D3ZSR8	Rattus norvegicus	O
RAT\|RGD=1564606\|UniProtKB=F1LT35	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000022278.3\|UniProtKB=A0A452DJ23	Bos taurus	O
FELCA\|Ensembl=ENSFCAG00000050950.1\|UniProtKB=A0A5F5XNE7	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845007036.1\|UniProtKB=A0A8I3N792	Canis lupus familiaris	O
PANTR\|Ensembl=ENSPTRG00000052036.1\|UniProtKB=A0A2I3RMB9	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000023647.2\|UniProtKB=G3SAV3	Gorilla gorilla gorilla	O
HUMAN\|HGNC=10317\|UniProtKB=P62750	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000051034.1\|UniProtKB=A0A2I3RW14	Pan troglodytes	O
PANTR\|Ensembl=ENSPTRG00000044387.1\|UniProtKB=A0A2I3RC49	Pan troglodytes	O
PANTR\|Ensembl=ENSPTRG00000050125.1\|UniProtKB=A0A2I3SFI5	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000022216.2\|UniProtKB=G3RUK7	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000016736.3\|UniProtKB=G3SDX8	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000022951.4\|UniProtKB=A0A1D5QVT1	Macaca mulatta	O
MACMU\|Ensembl=ENSMMUG00000031876.3\|UniProtKB=F7HIX4	Macaca mulatta	O
MOUSE\|MGI=MGI=3040672\|UniProtKB=P62751	Mus musculus	O
RAT\|RGD=11419406\|UniProtKB=D4AAL7	Rattus norvegicus	O
RAT\|RGD=1304897\|UniProtKB=P62752	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000046394.2\|UniProtKB=A0A452DJM0	Bos taurus	O
FELCA\|Ensembl=ENSFCAG00000026993.4\|UniProtKB=M3WWZ3	Felis catus	O
FELCA\|Ensembl=ENSFCAG00000030800.3\|UniProtKB=M3X3V4	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845025162.1\|UniProtKB=A0A8I3PTV2	Canis lupus familiaris	O
PIG\|Ensembl=ENSSSCG00000026941.3\|UniProtKB=A0A8W4FMK5	Sus scrofa	O
PIG\|Ensembl=ENSSSCG00000017768.5\|UniProtKB=F2Z522	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000043011.2\|UniProtKB=A0A5F5PKI8	Equus caballus	O
HORSE\|Ensembl=ENSECAG00000002201.3\|UniProtKB=F6ULU9	Equus caballus	O
CANLF\|Ensembl=ENSCAFG00845004399.1\|UniProtKB=A0A8I3MSV8	Canis lupus familiaris	O
BOVIN\|Ensembl=ENSBTAG00000032775.4\|UniProtKB=E1B983	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000032432.2\|UniProtKB=E1BII3	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000011830.3\|UniProtKB=A0A3Q1LQE3	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000022498.4\|UniProtKB=E1BED6	Bos taurus	O
BOVIN\|Gene=RPL23A\|UniProtKB=Q24JY1	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000035080.3\|UniProtKB=A0A286ZL51	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000008928.4\|UniProtKB=A0A9R1SRV1	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000004021.6\|UniProtKB=M3W1E8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845015695.1\|UniProtKB=A0A8I3P0W3	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845003617.1\|UniProtKB=A0A8I3MQ91	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845022211.1\|UniProtKB=A0A8I3PHW2	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845013135.1\|UniProtKB=A0A8I3NNK8	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845029942.1\|UniProtKB=A0A8I3Q2V8	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845003629.1\|UniProtKB=A0A8I3MME4	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845009599.1\|UniProtKB=E2QZG2	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000016415.2\|UniProtKB=F7AT41	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000019297.3\|UniProtKB=F6RZ66	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000009558.3\|UniProtKB=F6S1W8	Ornithorhynchus anatinus	O
ANOCA\|Ensembl=ENSACAG00000045186.1\|UniProtKB=A0A803SVZ0	Anolis carolinensis	O
XENLA\|Gene=LOC108697688\|UniProtKB=A0A1L8FGH6	Xenopus laevis	O
XENLA\|Gene=rpl23a.S\|UniProtKB=Q66KX3	Xenopus laevis	O
XENLA\|Gene=rpl23a.L\|UniProtKB=A0A1L8H4S4	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-5891038\|UniProtKB=Q6DEP9	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000005524.2\|UniProtKB=H2LLN8	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030131-7479\|UniProtKB=Q6Q416	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000005815.1\|UniProtKB=W5MF65	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000010522.3\|UniProtKB=F6S2C6	Ciona intestinalis	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_128223\|UniProtKB=C3YD43	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC588157\|UniProtKB=A0A7M7P8T9	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00004438\|UniProtKB=P48162	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00034993\|UniProtKB=A8XK47	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00004439\|UniProtKB=Q20647	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00026823\|UniProtKB=A8WW60	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00304403\|UniProtKB=A0A8R1Z8S4	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0026372\|UniProtKB=Q9W0A8	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP006037\|UniProtKB=Q7PP63	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC012708\|UniProtKB=D6WZR2	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_314559\|UniProtKB=E9G6J6	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW024803\|UniProtKB=B7QA40	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG101069\|UniProtKB=T1ED29	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g160446\|UniProtKB=A7RM97	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG36440\|UniProtKB=B3S688	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_38968\|UniProtKB=A9VB92	Monosiga brevicollis	O
YEAST\|SGD=S000005487\|UniProtKB=P04456	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_ADL166W\|UniProtKB=Q75AT6	Eremothecium gossypii	O
CANAL\|CGD=CAL0000200350\|UniProtKB=A0A1D8PPS1	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_F25531g\|UniProtKB=Q6C0E1	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_08856\|UniProtKB=Q5AS74	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_5G05630\|UniProtKB=Q4WTP5	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU06226\|UniProtKB=Q7SBS9	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_00023\|UniProtKB=A7E401	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_09012\|UniProtKB=Q0UGV2	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBC106.18\|UniProtKB=Q10330	Schizosaccharomyces pombe	O
SCHPO\|PomBase=SPBC4F6.04\|UniProtKB=O74391	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_04304\|UniProtKB=B6K6H2	Schizosaccharomyces japonicus	O
SCHJY\|EnsemblGenome=SJAG_02840\|UniProtKB=B6K1B5	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNC00350\|UniProtKB=Q5KL89	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_05998\|UniProtKB=A0A0D1DN50	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_00058\|UniProtKB=E3JQ19	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_24589\|UniProtKB=F4P163	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_182850\|UniProtKB=C4LV64	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0293502\|UniProtKB=Q54BQ3	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_92654\|UniProtKB=F0ZVA4	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_06_0570\|UniProtKB=Q4QJ20	Leishmania major	O
TRYB2\|Gene_ORFName=Tb927.7.5170\|UniProtKB=Q57ZH2	Trypanosoma brucei	O
TRYB2\|Gene_ORFName=Tb927.7.5180\|UniProtKB=Q57ZH1	Trypanosoma brucei	O
GIAIC\|EnsemblGenome=GL50803_7870\|UniProtKB=A8BMP6	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_224750\|UniProtKB=A2DW98	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_160160\|UniProtKB=A2DUV8	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_433200\|UniProtKB=A2DIW1	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_093600\|UniProtKB=A2DBI3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_178000\|UniProtKB=A2DIF2	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1323400\|UniProtKB=Q8IE82	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00029600001\|UniProtKB=A0BKA2	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00029339001\|UniProtKB=A0BJJ4	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00017162001\|UniProtKB=A0DIC3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00024762001\|UniProtKB=A0E9R4	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00024904001\|UniProtKB=A0EA55	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00018553001\|UniProtKB=A0DMT2	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_6363\|UniProtKB=B8C438	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GQX2_PHYRM\|UniProtKB=H3GQX2	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_06g282500v5\|UniProtKB=A8J239	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00029p00132520\|UniProtKB=W1PNY1	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00001p00069970\|UniProtKB=W1NKZ6	Amborella trichopoda	O
MUSAM\|EnsemblGenome=Ma07_g01960\|UniProtKB=A0A804JR61	Musa acuminata subsp. malaccensis	O
SOLTU\|EnsemblGenome=PGSC0003DMG400044519\|UniProtKB=M1DV83	Solanum tuberosum	LDO
SELML\|EnsemblGenome=SELMODRAFT_406348\|UniProtKB=D8R232	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_271663\|UniProtKB=D8SKB2	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c13_15920\|UniProtKB=A9U378	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c3_21160\|UniProtKB=A0A2K1KVH8	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c12_19360\|UniProtKB=A9S3T5	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_8620\|UniProtKB=A9T0J3	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0028s0094\|UniProtKB=A0A2R6X9N0	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_003600040\|UniProtKB=A0A1Y1I9A1	Klebsormidium nitens	O
KORCO\|EnsemblGenome=Kcr_1489\|UniProtKB=B1L706	Korarchaeum cryptofilum	O
SACS2\|EnsemblGenome=SSO6401\|UniProtKB=Q97ZQ4	Sulfolobus solfataricus	O
PYRAE\|EnsemblGenome=PAE1972\|UniProtKB=Q8ZW50	Pyrobaculum aerophilum	O
METJA\|EnsemblGenome=MJ_0178\|UniProtKB=P54016	Methanocaldococcus jannaschii	O
THEKO\|EnsemblGenome=TK1540\|UniProtKB=Q5JDH1	Thermococcus kodakaraensis	O
CHLAA\|EnsemblGenome=Caur_2371\|UniProtKB=A9WH68	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4704\|UniProtKB=Q9L0D8	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv0703\|UniProtKB=P9WHB9	Mycobacterium tuberculosis	O
CLOBH\|Gene_OrderedLocusName=CBO3478\|UniProtKB=A5I7K4	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0190\|UniProtKB=Q8CWV6	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02510\|UniProtKB=Q2FW08	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00708\|UniProtKB=Q8Y441	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01180\|UniProtKB=P42924	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0133\|UniProtKB=Q81J40	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1498\|UniProtKB=P38512	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_0313\|UniProtKB=Q9RXK0	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC88028\|UniProtKB=Q7NPG8	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17347\|UniProtKB=P73318	Synechocystis	O
BACTN\|EnsemblGenome=BT_2725\|UniProtKB=Q8A478	Bacteroides thetaiotaomicron	O
RHOBA\|EnsemblGenome=RB7836\|UniProtKB=Q7UN18	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_012\|UniProtKB=O66433	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1444\|UniProtKB=B5YG45	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_0983\|UniProtKB=B8E1D5	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1643\|UniProtKB=Q8RIF7	Fusobacterium nucleatum	O
NEIMB\|EnsemblGenome=NMB0144\|UniProtKB=Q9K1I6	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2855\|UniProtKB=Q748Z1	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC50663\|UniProtKB=Q89J86	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0240\|UniProtKB=Q83ES2	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0779\|UniProtKB=P44361	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_0233\|UniProtKB=Q8EK66	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_2594\|UniProtKB=Q9KNY6	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0897\|UniProtKB=Q8PC47	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA4261\|UniProtKB=Q9HWD7	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM3438\|UniProtKB=Q7CPL3	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_0209\|UniProtKB=P69963	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE77973\|UniProtKB=P0ADZ0	Escherichia coli	O