PANTHER Gene Information

Gene Symbol(s):

WBGene00099944

Organism:

Pristionchus pacificus

View Gene in Tree


Tree	Reduced Tree

Gene Name:

BED-type domain-containing protein

Gene ID:

WBGene00099944

Protein ID:

A0A2A6C9Q4

Persistent Id:

PTN008455051

Alternate Ids:

ABKE03000055(EMBL)	A0A2A6C9Q4(Synonym)
WBGene00099944(Ensembl)	PDM74810(EMBL-CDS)
A0A2A6C9Q4_PRIPA(UniProtKB-ID)
Show All

PANTHER Classification

PANTHER Family:	WD REPEAT-CONTAINING PROTEIN 43 (PTHR44267)
PANTHER Subfamily:	WD REPEAT-CONTAINING PROTEIN 43 (PTHR44267:SF1)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
PANTHER GO-slim Cellular Component:	nucleolus
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	DNA binding, metal ion binding
GO BP Complete:	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO CC Complete:	nucleus, nucleolus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=28945\|UniProtKB=Q15061	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000011792.6\|UniProtKB=H2QHP5	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000015956.3\|UniProtKB=G3RR67	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000022268.4\|UniProtKB=F6XGL8	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1919765\|UniProtKB=Q6ZQL4	Mus musculus	LDO
RAT\|RGD=1565005\|UniProtKB=G3V920	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000018196.6\|UniProtKB=F1MCK7	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005045186.1\|UniProtKB=I3LH57	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000015953.4\|UniProtKB=A0A5F5Q1W1	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000018872.5\|UniProtKB=M3WNF5	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845010955.1\|UniProtKB=A0A8I3NHS3	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000015545.5\|UniProtKB=F6SKM7	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000014467.3\|UniProtKB=F7BD58	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010017677.1\|UniProtKB=A0A8V0Z9V2	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000009264.4\|UniProtKB=G1KIR1	Anolis carolinensis	LDO
XENLA\|Gene=wdr43.L\|UniProtKB=A0A1L8G6R0	Xenopus laevis	O
XENLA\|Gene=wdr43.S\|UniProtKB=A0A1L8G0Y1	Xenopus laevis	LDO
XENTR\|Ensembl=ENSXETG00000035654\|UniProtKB=A0A6I8SPK4	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000018236.2\|UniProtKB=H2MVK5	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-021231-3\|UniProtKB=Q8JHG6	Danio rerio	LDO
CIOIN\|Ensembl=ENSCING00000000336.3\|UniProtKB=F6WEC1	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118421006\|UniProtKB=A0A9J7LJN3	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC592550\|UniProtKB=A0A7M7PSD3	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00020389\|UniProtKB=O76407	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00040496\|UniProtKB=A8Y0V6	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0050349\|UniProtKB=A1Z7K2	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP010698\|UniProtKB=A0A1S4H5N7	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC003821\|UniProtKB=D6WFF9	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_96290\|UniProtKB=E9FXG8	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_303119\|UniProtKB=E9FSR1	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW008810\|UniProtKB=B7Q1C3	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG188473\|UniProtKB=T1FQ11	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g238105\|UniProtKB=A7RGM3	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG51818\|UniProtKB=B3RKZ1	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_38725\|UniProtKB=A9V9R4	Monosiga brevicollis	LDO
YEAST\|SGD=S000002806\|UniProtKB=Q04177	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AFR398W\|UniProtKB=Q753Q8	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000191285\|UniProtKB=A0A1D8PU59	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E16280g\|UniProtKB=Q6C5P8	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_01983\|UniProtKB=Q5BBU7	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_4G10550\|UniProtKB=Q4WPV1	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU08421\|UniProtKB=Q7SBY7	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_14329\|UniProtKB=A7F9P8	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_15587\|UniProtKB=Q0TXV3	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC1450.03\|UniProtKB=Q9Y7N1	Schizosaccharomyces pombe	O
SCHPO\|PomBase=SPAC20H4.01\|UniProtKB=Q9HE11	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02702\|UniProtKB=B6K0Y4	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNB01050\|UniProtKB=Q5KMN7	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_01673\|UniProtKB=A0A0D1CB77	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_08331\|UniProtKB=E3KE18	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_89207\|UniProtKB=F4P534	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_054840\|UniProtKB=C4M2K2	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0275141\|UniProtKB=Q8T2Q3	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_79494\|UniProtKB=F0ZMR7	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_26_1300\|UniProtKB=Q4Q964	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.7.650\|UniProtKB=Q57VR1	Trypanosoma brucei	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_23900\|UniProtKB=B8C7P5	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GBY5_PHYRM\|UniProtKB=H3GBY5	Phytophthora ramorum	LDO
PHYRM\|Gene=H3GKG7_PHYRM\|UniProtKB=H3GKG7	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g538500v5\|UniProtKB=A0A2K3D5C1	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_38G00780\|UniProtKB=A0A0K9P4N8	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma06_g03240\|UniProtKB=A0A804JC44	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_002556mg\|UniProtKB=K3XKY3	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3009G219400\|UniProtKB=A0A1B6P9T2	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb294740\|UniProtKB=A0A804Q5M2	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os12g0634800\|UniProtKB=Q2QLN8	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g00800v3\|UniProtKB=I1IG51	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0420730\|UniProtKB=A0A8I6XW29	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS5A02G011100\|UniProtKB=A0A3B6KAG5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS5B02G008800\|UniProtKB=A0A3B6LF37	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G015900\|UniProtKB=A0A3B6MJH6	Triticum aestivum	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0275950\|UniProtKB=A0A8I6XNV6	Hordeum vulgare subsp. vulgare	O
SPIOL\|Gene=LOC110798302\|UniProtKB=A0A9R0J1B4	Spinacia oleracea	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I020971\|UniProtKB=A0A059AR92	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C05P13600.1\|UniProtKB=A0A078HPX1	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A06P11480.1\|UniProtKB=A0A078HDY8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra016659\|UniProtKB=M4DJI1	Brassica campestris	O
BRACM\|EnsemblGenome=Bra026131\|UniProtKB=M4EBH2	Brassica campestris	LDO
ARATH\|TAIR=locus=2196603\|UniProtKB=Q8L403	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107944969\|UniProtKB=A0A1U8N5L0	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_028339\|UniProtKB=A0A061GAT8	Theobroma cacao	LDO
POPTR\|EnsemblGenome=POPTR_001G173100v3\|UniProtKB=A0A2K2BZ91	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_001G173300v3\|UniProtKB=A0A2K2BZ98	Populus trichocarpa	O
POPTR\|Gene_ORFName=POPTR_003G060900\|UniProtKB=A0A3N7EMM3	Populus trichocarpa	O
SOYBN\|EnsemblGenome=GLYMA_13G363200\|UniProtKB=I1M5R6	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_15G010600\|UniProtKB=A0A0R0G3C9	Glycine max	O
JUGRE\|EnsemblGenome=Jr12_19780\|UniProtKB=A0A2I4EVB4	Juglans regia	O
JUGRE\|EnsemblGenome=Jr07_30860\|UniProtKB=A0A2I4F890	Juglans regia	LDO
PRUPE\|EnsemblGenome=PRUPE_6G012700\|UniProtKB=M5VZP8	Prunus persica	LDO