PANTHER Gene Information

Gene Symbol(s):

Thumpd1

Organism:

Rattus norvegicus

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Gene Name:

THUMP domain containing 1

Gene ID:

1308854

Protein ID:

Q5M943

Persistent Id:

PTN009009712

Alternate Ids:

AAH87659(EMBL-CDS)	BC087659(EMBL)
ENSRNOG00000014946(Ensembl)	Q5M943_RAT(UniProtKB-ID)
57527375(GI)	ENSRNOP00000020077(Ensembl_PRO)
309041(GeneID)	NM_001009688(refSeq)
ENSRNOT00000020077(Ensembl_TRS)	1308854(RGD)
Q5M943(Synonym)
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PANTHER Classification

PANTHER Family:	THUMP DOMAIN CONTAINING PROTEIN 1-RELATED (PTHR13452)
PANTHER Subfamily:	THUMP DOMAIN-CONTAINING PROTEIN 1 (PTHR13452:SF10)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	tRNA modification
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	tRNA modification
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000046073.1\|UniProtKB=A0A2I3S6H3	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000043232.1\|UniProtKB=A0A2I2YYA3	Gorilla gorilla gorilla	O
HUMAN\|HGNC=23807\|UniProtKB=Q9NXG2	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000007848.6\|UniProtKB=H2QAP5	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000005231.3\|UniProtKB=G3RRY5	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000004225.3\|UniProtKB=F6Z305	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2444479\|UniProtKB=Q99J36	Mus musculus	LDO
BOVIN\|Ensembl=ENSBTAG00000047673\|UniProtKB=Q24K03	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005045897.1\|UniProtKB=I3LLD6	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000005354.3\|UniProtKB=A0A9L0SUG4	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000039296.3\|UniProtKB=A0A2I2UWB4	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845007689.1\|UniProtKB=A0A8I3N3C4	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000006971.4\|UniProtKB=F6QUS5	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000042225.1\|UniProtKB=A0A6I8P557	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010017957.1\|UniProtKB=A0A8V0Z4E4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000009625.4\|UniProtKB=R4GC25	Anolis carolinensis	LDO
ANOCA\|Ensembl=ENSACAG00000036527.1\|UniProtKB=A0A803TLB2	Anolis carolinensis	O
XENLA\|Gene=thumpd1.L\|UniProtKB=A0A1L8EXK3	Xenopus laevis	O
XENLA\|Gene=thumpd1.S\|UniProtKB=Q5XHI0	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5742238\|UniProtKB=Q6P8A9	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000027557.1\|UniProtKB=H2M1I6	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040426-1805\|UniProtKB=A0A0R4IIV9	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000000854.1\|UniProtKB=W5LXU1	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000021274.1\|UniProtKB=H2XXY6	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118428910\|UniProtKB=A0A9J7N8K3	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC590162\|UniProtKB=A0A7M7NPM4	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00020953\|UniProtKB=O61900	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG06641\|UniProtKB=A8X2Q9	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304675\|UniProtKB=A0A8R1Z5T4	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0035532\|UniProtKB=Q9VZD8	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP007705\|UniProtKB=Q7QJX0	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC003462\|UniProtKB=D6WGN0	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_220030\|UniProtKB=E9FS38	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW003593\|UniProtKB=B7PGQ7	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG84286\|UniProtKB=T1G5H0	helobdella robusta	LDO
TRIAD\|EnsemblGenome=TriadG52935\|UniProtKB=B3RMU9	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_27078\|UniProtKB=A9V488	Monosiga brevicollis	LDO
YEAST\|SGD=S000003201\|UniProtKB=P53072	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AFR250C\|UniProtKB=Q753S6	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000185454\|UniProtKB=A0A1D8PRG9	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F16137g\|UniProtKB=Q6C1H7	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_04889\|UniProtKB=Q5B3J1	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G11060\|UniProtKB=Q4WXX8	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU02385\|UniProtKB=Q7S4P9	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_10986\|UniProtKB=A7F069	Sclerotinia sclerotiorum	LDO
SCHPO\|PomBase=SPBC25H2.10c\|UniProtKB=P87151	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_01638\|UniProtKB=B6JYH6	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNG02010\|UniProtKB=Q5KE22	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_02913\|UniProtKB=A0A0D1CQR4	Ustilago maydis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_4962\|UniProtKB=F4P8G9	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_158260\|UniProtKB=C4M2E5	Entamoeba histolytica	LDO
ENTH1\|EnsemblGenome=EHI_156700\|UniProtKB=C4MB17	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0291908\|UniProtKB=Q54DZ0	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_148721\|UniProtKB=F0ZBU0	Dictyostelium purpureum	LDO
DICDI\|dictyBase=DDB_G0279155\|UniProtKB=Q54X76	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_158531\|UniProtKB=F1A1U3	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_35_0860\|UniProtKB=E9AER1	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.70.3760\|UniProtKB=Q38BN6	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_453860\|UniProtKB=A2DPW2	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1249100\|UniProtKB=Q8I4U3	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00017186001\|UniProtKB=A0DIE7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00018520001\|UniProtKB=A0DMP9	Paramecium tetraurelia	LDO
PHYRM\|Gene=H3GI65_PHYRM\|UniProtKB=H3GI65	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_17g713000v5\|UniProtKB=A0A2K3CPQ0	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00044p00041520\|UniProtKB=U5CUS8	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_16G00910\|UniProtKB=A0A0K9PT53	Zostera marina	O
MUSAM\|EnsemblGenome=Ma11_g01460\|UniProtKB=A0A804L318	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_018364mg\|UniProtKB=K3YVR8	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3004G285200\|UniProtKB=A0A194YS11	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb250300\|UniProtKB=A0A1D6HFP4	Zea mays	O
ORYSJ\|EnsemblGenome=Os02g0672400\|UniProtKB=Q6EU12	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g51420v3\|UniProtKB=I1ICI1	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0603190\|UniProtKB=F2D9L8	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS6A02G254800\|UniProtKB=A0A3B6NT39	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G270700\|UniProtKB=A0A3B6PN86	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G236100\|UniProtKB=A0A3B6QJ76	Triticum aestivum	O
NELNU\|Gene=LOC104606974\|UniProtKB=A0A1U8B3U3	Nelumbo nucifera	O
SPIOL\|Gene=LOC110795318\|UniProtKB=A0A9R0IUY4	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr08g0338961\|UniProtKB=A0A251U5D2	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800402710\|UniProtKB=A0A9R1UPP7	Lactuca sativa	O
CAPAN\|EnsemblGenome=T459_21181\|UniProtKB=A0A1U8DR46	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400030230\|UniProtKB=M1CYT0	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc01g020240.3\|UniProtKB=A0A3Q7ED60	Solanum lycopersicum	O
TOBAC\|Gene=LOC107813379\|UniProtKB=A0A1S4BZ68	Nicotiana tabacum	O
TOBAC\|Gene=LOC107772554\|UniProtKB=A0A1S3Y5K2	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi01g00579\|UniProtKB=D7SMG7	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_G02045\|UniProtKB=A0A059BEJ5	Eucalyptus grandis	O
BRANA\|Gene_ORFName=DARMORV10_C08P12590.1\|UniProtKB=A0A078H2Z8	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A08P34700.1\|UniProtKB=A0A078H033	Brassica napus	O
BRACM\|EnsemblGenome=Bra030766\|UniProtKB=M4EPP6	Brassica campestris	O
ARATH\|TAIR=locus=2203033\|UniProtKB=Q7XBQ8	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107942780\|UniProtKB=A0A1U8N2H2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107909941\|UniProtKB=A0A1U8JSD1	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_011165\|UniProtKB=A0A061E9D8	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g0201161mg\|UniProtKB=A0A067EEG9	Citrus sinensis	O
POPTR\|Gene_ORFName=POPTR_010G099500\|UniProtKB=A0A3N7FLF0	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_15G141000\|UniProtKB=A0A2C9UG26	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0775790\|UniProtKB=B9S7B4	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_10G280900\|UniProtKB=I1LF37	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_20G108700\|UniProtKB=I1NFA6	Glycine max	O
MEDTR\|EnsemblGenome=MTR_1g112360\|UniProtKB=A0A072VRE9	Medicago truncatula	O
JUGRE\|Gene=LOC108997103\|UniProtKB=A0A6P9DZB9	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_5G273440\|UniProtKB=A0A0A0KQX3	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_1G340600\|UniProtKB=M5XD23	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_441087\|UniProtKB=D8RHS1	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_443858\|UniProtKB=D8S4Y2	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c10_230\|UniProtKB=A0A2K1JX43	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0161s0009\|UniProtKB=A0A2R6W3R1	Marchantia polymorpha	O
CHLRE\|EnsemblGenome=CHLRE_14g629550v5\|UniProtKB=A0A2K3CYK3	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00053p00166720\|UniProtKB=W1PBX7	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_16G00190\|UniProtKB=A0A0K9PV01	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g05030\|UniProtKB=A0A804HQF3	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_026436mg\|UniProtKB=K3ZIN4	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3005G157100\|UniProtKB=C5Y4T0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb200070\|UniProtKB=K7UNM6	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os11g0568600\|UniProtKB=Q2R2E7	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g16160v3\|UniProtKB=I1IL10	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0113530\|UniProtKB=F2CVX5	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS2A02G112700\|UniProtKB=A0A3B6ASK4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G113200\|UniProtKB=W5C698	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_000779\|UniProtKB=A0A1U8BA90	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110783285\|UniProtKB=A0A9R0JQW2	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0628781\|UniProtKB=A0A251SFG5	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200060750\|UniProtKB=A0A9R1WG51	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a008459mg\|UniProtKB=A0A022RAJ4	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_27989\|UniProtKB=A0A2G2YFH4	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400031244\|UniProtKB=M1D382	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc11g065180.2\|UniProtKB=A0A3Q7JNG4	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107782019\|UniProtKB=A0A1S3Z1M8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107777364\|UniProtKB=A0A1S3YLJ5	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi06g01274\|UniProtKB=D7SNG3	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B03712\|UniProtKB=A0A059D9T1	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra006159\|UniProtKB=M4CPM0	Brassica campestris	O
BRACM\|EnsemblGenome=Bra008889\|UniProtKB=M4CXE2	Brassica campestris	LDO
ARATH\|TAIR=locus=505006609\|UniProtKB=Q94CK1	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107891433\|UniProtKB=A0A1U8I0G0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107889304\|UniProtKB=A0A1U8HT11	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_040796\|UniProtKB=A0A061GZC0	Theobroma cacao	LDO
POPTR\|EnsemblGenome=POPTR_009G049700v3\|UniProtKB=B9HP06	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G254600v3\|UniProtKB=B9GI37	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_14G005500\|UniProtKB=A0A2C9UJE7	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1578940\|UniProtKB=B9RIG8	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_11G015900\|UniProtKB=I1LG63	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_01G226800\|UniProtKB=I1JAF5	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g009010\|UniProtKB=G7K999	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr14_19000\|UniProtKB=A0A2I4F1I8	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr14_18990\|UniProtKB=A0A2I4F1H7	Juglans regia	LDO
PRUPE\|EnsemblGenome=PRUPE_4G256800\|UniProtKB=M5WHP0	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_427525\|UniProtKB=D8SZW0	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_405908\|UniProtKB=D8R025	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c3_2270\|UniProtKB=A9RBE4	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0091s0083\|UniProtKB=A0A2R6WHB6	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001790020\|UniProtKB=A0A1Y1HZS9	Klebsormidium nitens	LDO
PYRAE\|EnsemblGenome=PAE2935\|UniProtKB=Q8ZU61	Pyrobaculum aerophilum	LDO