PANTHER Gene Information

Gene Symbol(s):

rpsH

Organism:

Rhodopirellula baltica

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Gene Name:

RNA polymerase sigma factor

Gene ID:

RB2303

Protein ID:

Q7UW29

Persistent Id:

PTN002875972

Alternate Ids:

Q7UW29_RHOBA(UniProtKB-ID)	BX294136(EMBL)
32397235(GI)	NP_864858(refSeq)
Q7UW29(Synonym)	RB2303(Ensembl)
CAD72542(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	RNA POLYMERASE ECF-TYPE SIGMA FACTO (PTHR43133)
PANTHER Subfamily:	RNA POLYMERASE SIGMA FACTOR HI_1459-RELATED (PTHR43133:SF8)
PANTHER GO-slim Molecular Function:	DNA-binding transcription factor activity
PANTHER GO-slim Biological Process:	regulation of DNA-templated transcription
PANTHER GO-slim Cellular Component:
PANTHER protein class:	Sigma factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, sigma factor activity
GO BP Complete:	regulation of DNA-templated transcription initiation, regulation of DNA-templated transcription, DNA-templated transcription initiation
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BATDJ\|Gene_ORFName=BATDEDRAFT_93309\|UniProtKB=F4PG20	Batrachochytrium dendrobatidis	LDO
CHLAA\|EnsemblGenome=Caur_0925\|UniProtKB=A9WHN9	Chloroflexus aurantiacus	LDO
STRCO\|Gene_OrderedLocusName=SCO4996\|UniProtKB=Q93JJ8	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO4908\|UniProtKB=Q8R5N3	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO4005\|UniProtKB=Q9ADQ0	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO3709\|UniProtKB=Q9X8Z1	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCP1.151c\|UniProtKB=Q9AD00	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO1876\|UniProtKB=Q93RV0	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO3613\|UniProtKB=Q9XAI9	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO3892\|UniProtKB=Q9S6U3	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv3911\|UniProtKB=O53590	Mycobacterium tuberculosis	O
STRCO\|Gene_OrderedLocusName=SCO3736\|UniProtKB=Q9L0W8	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO4810\|UniProtKB=Q9KY54	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO4117\|UniProtKB=Q9KYF3	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO1332\|UniProtKB=Q9K401	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO5147\|UniProtKB=Q9FBL1	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv1221\|UniProtKB=P9WGG7	Mycobacterium tuberculosis	LDO
CLOBH\|Gene_OrderedLocusName=CBO0674\|UniProtKB=A5HZL7	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO1625\|UniProtKB=A5I295	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO0043\|UniProtKB=A5HXT9	Clostridium botulinum	LDO
STAA8\|EnsemblGenome=SAOUHSC_00515\|UniProtKB=Q2G0P4	Staphylococcus aureus	LDO
BACCR\|EnsemblGenome=BC_1698\|UniProtKB=Q81F96	Bacillus cereus	LDO
DEIRA\|EnsemblGenome=DR_0180\|UniProtKB=Q9RXX5	Deinococcus radiodurans	LDO
GLOVI\|Gene=Q7NJU3_GLOVI\|UniProtKB=Q7NJU3	Gloeobacter violaceus	LDO
LEPIN\|EnsemblGenome=LA_0443\|UniProtKB=Q8F8V7	Leptospira interrogans	O
LEPIN\|EnsemblGenome=LB_144\|UniProtKB=Q8EXR4	Leptospira interrogans	LDO
LEPIN\|EnsemblGenome=LA_2101\|UniProtKB=Q8F4E0	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_3396\|UniProtKB=Q8A2A9	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_4461\|UniProtKB=Q89ZB6	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_0326\|UniProtKB=Q8AAY6	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_4571\|UniProtKB=Q89Z06	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_3190\|UniProtKB=Q8A2W5	Bacteroides thetaiotaomicron	LDO
NEIMB\|EnsemblGenome=NMB2144\|UniProtKB=Q9JXA8	Neisseria meningitidis serogroup b	LDO
BRADU\|Gene=Q89NY9_BRADU\|UniProtKB=Q89NY9	Bradyrhizobium diazoefficiens	LDO
XANCP\|EnsemblGenome=XCC3593\|UniProtKB=Q8P4W3	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA2093\|UniProtKB=Q9I222	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA0675\|UniProtKB=Q9I5P9	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA0472\|UniProtKB=Q9I646	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2050\|UniProtKB=Q9I265	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2426\|UniProtKB=G3XCV1	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA1363\|UniProtKB=Q9I3Y1	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA0149\|UniProtKB=Q9I6Y3	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA3410\|UniProtKB=Q9HYJ5	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2468\|UniProtKB=Q9I114	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA4896\|UniProtKB=Q9HUR7	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA1912\|UniProtKB=Q9I2J2	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA1300\|UniProtKB=Q9I444	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2387\|UniProtKB=Q9I193	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA3899\|UniProtKB=Q9HXB4	Pseudomonas aeruginosa	O
ECOLI\|EnsemblGenome=BAE78284\|UniProtKB=P23484	Escherichia coli	O
HAEIN\|EnsemblGenome=HI_1459\|UniProtKB=P45215	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_3551\|UniProtKB=Q8EBG7	Shewanella oneidensis	LDO
XANCP\|EnsemblGenome=XCC2916\|UniProtKB=Q8P6Q1	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA2896\|UniProtKB=Q9HZV1	Pseudomonas aeruginosa	LDO