PANTHER Gene Information

Gene Symbol(s):

RCOM_1909170

Organism:

Ricinus communis

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Gene Name:

tRNA pseudouridine synthase

Gene ID:

RCOM_1909170

Protein ID:

B9TJ99

Persistent Id:

PTN004236975

Alternate Ids:

B9TJ99(Synonym)	EQ983582(EMBL)
B9TJ99_RICCO(UniProtKB-ID)	223512770(GI)
EEF24066(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	PSEUDOURIDYLATE SYNTHASE (PTHR11142)
PANTHER Subfamily:	TRNA PSEUDOURIDINE SYNTHASE-LIKE 1 (PTHR11142:SF0)
PANTHER GO-slim Molecular Function:	intramolecular transferase activity
PANTHER GO-slim Biological Process:	pseudouridine synthesis tRNA modification
PANTHER GO-slim Cellular Component:
PANTHER protein class:	lyase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding, pseudouridine synthase activity, isomerase activity, tRNA pseudouridine(38-40) synthase activity
GO BP Complete:	pseudouridine synthesis, tRNA pseudouridine synthesis, tRNA processing
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
THAPS\|EnsemblGenome=THAPSDRAFT_268327\|UniProtKB=B8BV78	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_25634\|UniProtKB=B8CEU1	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_268614\|UniProtKB=B8C122	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_11542\|UniProtKB=B8CEU5	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_264420\|UniProtKB=B8CDY0	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GNS3_PHYRM\|UniProtKB=H3GNS3	Phytophthora ramorum	O
PHYRM\|Gene=H3GHX8_PHYRM\|UniProtKB=H3GHX8	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_09g405150v5\|UniProtKB=A0A2K3DF61	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_13g591501v5\|UniProtKB=A0A2K3D160	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00045p00102200\|UniProtKB=W1P4X5	Amborella trichopoda	O
MUSAM\|EnsemblGenome=Ma11_g04520\|UniProtKB=A0A804L469	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_019261mg\|UniProtKB=K3YYB1	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3004G193200\|UniProtKB=A0A1Z5RP37	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb245280\|UniProtKB=A0A804PK96	Zea mays	O
BRADI\|EnsemblGenome=BRADI_3g27090v3\|UniProtKB=A0A0Q3FBX8	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0033590\|UniProtKB=F2D073	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS1A02G134500\|UniProtKB=A0A3B5XYF1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G124100\|UniProtKB=A0A3B5ZR25	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1B02G152500\|UniProtKB=A0A3B5YV25	Triticum aestivum	O
NELNU\|Gene=LOC104607158\|UniProtKB=A0A1U8AWL3	Nelumbo nucifera	O
SPIOL\|Gene=LOC110792410\|UniProtKB=A0A9R0IQV9	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0431171\|UniProtKB=A0A251TK11	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100016650\|UniProtKB=A0A9R1WQS0	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a021608mg\|UniProtKB=A0A022RAF8	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_15242\|UniProtKB=A0A2G2ZJP1	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400027203\|UniProtKB=M1CLH0	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc05g053190.3\|UniProtKB=A0A3Q7GJW1	Solanum lycopersicum	O
TOBAC\|Gene=LOC107780745\|UniProtKB=A0A1S3YWV5	Nicotiana tabacum	O
TOBAC\|Gene=LOC107827274\|UniProtKB=A0A1S4D9F9	Nicotiana tabacum	O
VITVI\|Gene_OrderedLocusName=VIT_05s0020g00860\|UniProtKB=D7T696	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_B03960\|UniProtKB=A0A059D9W2	Eucalyptus grandis	O
BRANA\|Gene_ORFName=DARMORV10_C03P42560.1\|UniProtKB=A0A078F4U0	Brassica napus	O
BRACM\|EnsemblGenome=Bra001227\|UniProtKB=M4CAJ8	Brassica campestris	O
ARATH\|TAIR=locus=2077552\|UniProtKB=A1A6J3	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107910516\|UniProtKB=A0A1U8JYP5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107951548\|UniProtKB=A0A1U8NTE2	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_021502\|UniProtKB=A0A061EXC9	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g043662mg\|UniProtKB=A0A067G1J9	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g042710mg\|UniProtKB=A0A067D9Y7	Citrus sinensis	O
POPTR\|Gene_ORFName=POPTR_008G206200\|UniProtKB=A0A3N7FIH9	Populus trichocarpa	O
SOYBN\|EnsemblGenome=GLYMA_17G041000\|UniProtKB=A0A0R0F7R0	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_13G119200\|UniProtKB=K7LZ80	Glycine max	O
MEDTR\|EnsemblGenome=MTR_4g123970\|UniProtKB=G7JR09	Medicago truncatula	O
JUGRE\|Gene=LOC109004722\|UniProtKB=A0A6P9EJA3	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_6G001730\|UniProtKB=A0A0A0KB67	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_1G104700\|UniProtKB=A0A251QVK3	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_84331\|UniProtKB=D8R403	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_78854\|UniProtKB=D8QUD6	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c21_5420\|UniProtKB=A0A2K1IQS8	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0209s0002\|UniProtKB=A0A2R6W089	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000430320\|UniProtKB=A0A1Y1HMY0	Klebsormidium nitens	O
PYRAE\|EnsemblGenome=PAE1142\|UniProtKB=Q8ZXR6	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_0208\|UniProtKB=Q8TU65	Methanosarcina acetivorans	O
METJA\|EnsemblGenome=MJ_1675\|UniProtKB=Q59069	Methanocaldococcus jannaschii	O
HALSA\|EnsemblGenome=VNG_2003G\|UniProtKB=Q9HNP6	Halobacterium salinarum	O
THEKO\|EnsemblGenome=TK0927\|UniProtKB=Q5JI92	Thermococcus kodakaraensis	O
CHLAA\|EnsemblGenome=Caur_2398\|UniProtKB=A9WH95	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4731\|UniProtKB=O86776	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv3455c\|UniProtKB=P9WHP9	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_182\|UniProtKB=P47428	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO1914\|UniProtKB=A5I338	Clostridium botulinum	O
BACCR\|EnsemblGenome=BC_0471\|UniProtKB=Q813Z9	Bacillus cereus	O
CLOBH\|Gene_OrderedLocusName=CBO3447\|UniProtKB=A5I7H2	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr1451\|UniProtKB=Q8CWQ1	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02480\|UniProtKB=Q2FW37	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00676\|UniProtKB=Q8Y457	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01480\|UniProtKB=P70973	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0163\|UniProtKB=Q814C2	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1574\|UniProtKB=Q9X1R0	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_2290\|UniProtKB=Q9RS37	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC91510\|UniProtKB=Q7MBB9	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17323\|UniProtKB=P73295	Synechocystis	O
LEPIN\|EnsemblGenome=LA_2740\|UniProtKB=Q8CXS6	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_4237\|UniProtKB=Q89ZY4	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_463\|UniProtKB=O84469	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB2676\|UniProtKB=Q7TU07	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_749\|UniProtKB=O66953	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1546\|UniProtKB=B5YGE4	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1013\|UniProtKB=B8E1G5	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1600\|UniProtKB=Q8R601	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_0361\|UniProtKB=P56144	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB2036\|UniProtKB=Q9JXI2	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2877\|UniProtKB=P60350	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC53372\|UniProtKB=Q89BP1	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0892\|UniProtKB=Q4AAX9	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_1644\|UniProtKB=P45291	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_3068\|UniProtKB=K4PSU2	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0999\|UniProtKB=Q9KTA4	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC2546\|UniProtKB=Q8P7R5	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA3114\|UniProtKB=O87016	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2368\|UniProtKB=Q8ZNB9	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_2398\|UniProtKB=Q8ZD27	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAA16175\|UniProtKB=P07649	Escherichia coli	O