PANTHER Gene Information

Gene Symbol(s):

yibK

Organism:

Salmonella typhimurium

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Gene Name:

tRNA (cytidine(34)-2'-O)-methyltransferase

Gene ID:

STM3695

Protein ID:

Q8ZL60

Persistent Id:

PTN001738493

Alternate Ids:

AE006468(EMBL)	STM3695(Ensembl)
1255219(GeneID)	Q8ZL60(Synonym)
81521260(GI)	SENT99287:STM3695-MONOMER(BioCyc)
Q8ZL60_SALTY(UniProtKB-ID)	NC_003197(refSeq)
AAL22554(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE (PTHR42971)
PANTHER Subfamily:	TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE (PTHR42971:SF1)
PANTHER GO-slim Molecular Function:	RNA methyltransferase activity
PANTHER GO-slim Biological Process:	tRNA methylation
PANTHER GO-slim Cellular Component:
PANTHER protein class:	RNA methyltransferase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA methyltransferase activity, tRNA (cytidine(34)-2'-O)-methyltransferase activity, RNA binding, tRNA methyltransferase activity, methyltransferase activity, S-adenosylmethionine-dependent methyltransferase activity, tRNA (5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase activity
GO BP Complete:	RNA methylation, tRNA processing, RNA processing, wobble position cytosine ribose methylation, wobble position uridine ribose methylation, tRNA methylation, methylation
GO CC Complete:	cytoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
TRIAD\|EnsemblGenome=TriadG63015\|UniProtKB=B3SFM8	Trichoplax adhaerens	LDO
CHLRE\|EnsemblGenome=CHLRE_10g417650v5\|UniProtKB=A0A2K3D8X1	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00022p00229500\|UniProtKB=W1PWJ0	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_101G00450\|UniProtKB=A0A0K9Q5B3	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma07_g02010\|UniProtKB=A0A804JR67	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_014317mg\|UniProtKB=K3YJ98	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3007G211100\|UniProtKB=A0A1Z5RAZ2	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb034920\|UniProtKB=A0A804LT88	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os08g0506500\|UniProtKB=A0A0P0XHQ7	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g39920v3\|UniProtKB=A0A0Q3FGX3	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0679610\|UniProtKB=F2DVW6	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G244100\|UniProtKB=A0A3B6TPL9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G146000\|UniProtKB=A0A3B6SFL2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G245500\|UniProtKB=A0A3B6RHU4	Triticum aestivum	LDO
NELNU\|Gene=LOC104603453\|UniProtKB=A0A1U8ASJ3	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110784757\|UniProtKB=A0A9R0JSF3	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr01g0026641\|UniProtKB=A0A9K3JVW4	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr01g0017301\|UniProtKB=A0A251VNY5	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C100043140\|UniProtKB=A0A9R1XTB8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a026166mg\|UniProtKB=A0A022RYS6	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a022905mg\|UniProtKB=A0A022QTV4	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc01g086900.3\|UniProtKB=A0A3Q7EJ38	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107820483\|UniProtKB=A0A1S4CM09	Nicotiana tabacum	O
TOBAC\|Gene=LOC107820968\|UniProtKB=A0A1S4CP42	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi13g01761\|UniProtKB=D7T2X8	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_G03394\|UniProtKB=A0A059BJA6	Eucalyptus grandis	LDO
ARATH\|TAIR=locus=2148488\|UniProtKB=Q6NPL4	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107930111\|UniProtKB=A0A1U8LVA9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107900731\|UniProtKB=A0A1U8IV22	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_005921\|UniProtKB=A0A061DXE7	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g024933mg\|UniProtKB=A0A067GXF8	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_009G064500v3\|UniProtKB=B9HNL8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_07G004100\|UniProtKB=A0A2C9VHB4	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1525400\|UniProtKB=B9RHG3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_08G152700\|UniProtKB=C6TCU8	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g027870\|UniProtKB=G7IWJ3	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr14_00460\|UniProtKB=A0A2I4FRY2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_7G428850\|UniProtKB=A0A0A0K6L9	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G009700\|UniProtKB=A0A251Q911	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_47811\|UniProtKB=D8R3B3	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c23_8130\|UniProtKB=A0A2K1IIG6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_11960\|UniProtKB=A0A2K1K6W8	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0078s0003\|UniProtKB=A0A2R6WL61	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_007340020\|UniProtKB=A0A1Y1ILW3	Klebsormidium nitens	LDO
MYCTU\|Gene_OrderedLocusName=Rv3366\|UniProtKB=O50394	Mycobacterium tuberculosis	LDO
MYCGE\|EnsemblGenome=MG_346\|UniProtKB=P47588	mycoplasma genitalium	LDO
CLOBH\|Gene_OrderedLocusName=CBO0217\|UniProtKB=A5HYB0	Clostridium botulinum	LDO
STRR6\|EnsemblGenome=spr0432\|UniProtKB=Q8DQY3	Streptococcus pneumoniae	LDO
STAA8\|EnsemblGenome=SAOUHSC_01988\|UniProtKB=Q2FX89	Staphylococcus aureus	LDO
LISMO\|Gene=Q8Y8G9_LISMO\|UniProtKB=Q8Y8G9	Listeria monocytogenes	LDO
BACSU\|EnsemblGenome=BSU_08930\|UniProtKB=O31590	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_0546\|UniProtKB=Q81I71	Bacillus cereus	LDO
DEIRA\|EnsemblGenome=DR_0231\|UniProtKB=Q9RXS5	Deinococcus radiodurans	LDO
GLOVI\|Gene=Q7NMR6_GLOVI\|UniProtKB=Q7NMR6	Gloeobacter violaceus	LDO
LEPIN\|EnsemblGenome=LA_0647\|UniProtKB=Q8F8B1	Leptospira interrogans	LDO
CHLTR\|EnsemblGenome=CT_540\|UniProtKB=O84545	Chlamydia trachomatis	LDO
RHOBA\|EnsemblGenome=RB3942\|UniProtKB=Q7TU01	Rhodopirellula baltica	LDO
DICTD\|EnsemblGenome=Dtur_0138\|UniProtKB=B8DYT8	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN0809\|UniProtKB=Q8R673	Fusobacterium nucleatum	LDO
NEIMB\|EnsemblGenome=NMB0268\|UniProtKB=Q9K199	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU1197\|UniProtKB=Q74DW8	Geobacter sulfurreducens	LDO
BRADU\|Gene=trmJ\|UniProtKB=Q89I93	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=trmL\|UniProtKB=Q89SB9	Bradyrhizobium diazoefficiens	LDO
COXBU\|EnsemblGenome=CBU_1517\|UniProtKB=Q83BJ1	Coxiella burnetii	LDO
HAEIN\|EnsemblGenome=HI_0766\|UniProtKB=P44868	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_4529\|UniProtKB=Q8E8X2	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_2695\|UniProtKB=Q9KNN6	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC0209\|UniProtKB=Q8PDX5	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA5127\|UniProtKB=Q9HU57	Pseudomonas aeruginosa	LDO
YERPE\|EnsemblGenome=YP_0071\|UniProtKB=Q74Y93	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE77686\|UniProtKB=P0AGJ7	Escherichia coli	LDO