PANTHER Gene Information

Gene Symbol(s):

SPCC550.03c

Organism:

Schizosaccharomyces pombe

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Gene Name:

Putative ATP-dependent RNA helicase C550.03c

Gene ID:

SPCC550.03c

Protein ID:

O59801

Persistent Id:

PTN002281636

Alternate Ids:

SPCC550.03c.1:pep(Ensembl_PRO)	2538841(GeneID)
SKI2(Synonym)	SPCC550.03c(Ensembl_TRS)
CU329672(EMBL)	CAA19107(EMBL-CDS)
SKI2_SCHPO(UniProtKB-ID)	SPCC550.03c(Ensembl)
3.6.4.-(EC)	NP_588095(refSeq)
3136048(GI)
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PANTHER Classification

PANTHER Family:	ATP-DEPENDENT RNA AND DNA HELICASE (PTHR12131)
PANTHER Subfamily:	ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL-RELATED (PTHR12131:SF1)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	DNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	ATP hydrolysis activity, ATP binding, RNA binding, RNA helicase activity
GO BP Complete:	nuclear-transcribed mRNA catabolic process, non-stop decay, endoplasmic reticulum unfolded protein response, nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
GO CC Complete:	Ski complex, cytosol, nucleolus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Metabolism of RNA, Deadenylation-dependent mRNA decay, mRNA decay by 3' to 5' exoribonuclease

Orthologs

ID	Organism	Type
HUMAN\|HGNC=10898\|UniProtKB=Q15477	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000017997.5\|UniProtKB=K7CW25	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000002270.3\|UniProtKB=G3QIM4	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000000736.4\|UniProtKB=A0A1D5Q9D5	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1099835\|UniProtKB=Q6NZR5	Mus musculus	LDO
RAT\|RGD=1303059\|UniProtKB=A0A0G2QC02	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000005587.6\|UniProtKB=E1BMS0	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000001424.5\|UniProtKB=F1RQW4	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000021823.4\|UniProtKB=A0A9L0RYH3	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000004519.6\|UniProtKB=M3W2C0	Felis catus	LDO
MONDO\|Ensembl=ENSMODG00000015052.4\|UniProtKB=F7FUK8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000043811.1\|UniProtKB=A0A6I8PA15	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010025933.1\|UniProtKB=A0A8V0ZZI7	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000011746.4\|UniProtKB=G1KLS9	Anolis carolinensis	LDO
XENLA\|Gene=skiv2l.L\|UniProtKB=A0A8J1LGY7	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-486233\|UniProtKB=F7CKF2	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000002021.2\|UniProtKB=H2L9I2	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-010430-5\|UniProtKB=F1R881	Danio rerio	LDO
CIOIN\|Ensembl=ENSCING00000005576.3\|UniProtKB=F6U4L6	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118422040\|UniProtKB=A0A9J7LM45	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC588833\|UniProtKB=A0A7M7PL75	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00008502\|UniProtKB=Q19103	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG06018\|UniProtKB=A8X134	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00116685\|UniProtKB=A0A2A6CQQ5	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0039117\|UniProtKB=Q9VCH8	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003182\|UniProtKB=Q7QBG5	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC033645\|UniProtKB=A0A139WFJ1	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_304359\|UniProtKB=E9GL10	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW013335\|UniProtKB=B7QFE6	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG193051\|UniProtKB=T1FUK6	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g210670\|UniProtKB=A7SDN7	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG21387\|UniProtKB=B3RPG2	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_13948\|UniProtKB=A9UQ39	Monosiga brevicollis	LDO
YEAST\|SGD=S000004390\|UniProtKB=P35207	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AER067C\|UniProtKB=Q757E6	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000185019\|UniProtKB=Q5A337	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_A11869g\|UniProtKB=Q6CH67	Yarrowia lipolytica	O
YARLI\|EnsemblGenome=YALI0_A13519g\|UniProtKB=Q6CH23	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_06007\|UniProtKB=Q5B0C3	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G10000\|UniProtKB=Q4X1H0	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01857\|UniProtKB=Q7SHE9	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_11456\|UniProtKB=A7F1I6	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_08240\|UniProtKB=Q0UJ24	Phaeosphaeria nodorum	LDO
SCHJY\|EnsemblGenome=SJAG_04118\|UniProtKB=B6K5Z2	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNI02710\|UniProtKB=Q5KBF6	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_00393\|UniProtKB=A0A0D1D0I7	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_07821\|UniProtKB=E3KB52	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_9076\|UniProtKB=F4NVS6	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_125170\|UniProtKB=C4M620	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0277211\|UniProtKB=Q86K90	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_152207\|UniProtKB=F0ZKR3	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_140830\|UniProtKB=A2FEQ7	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_042000\|UniProtKB=A2EUT9	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_432490\|UniProtKB=A2DIP0	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_177450\|UniProtKB=A2FMN7	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0909900\|UniProtKB=Q8I353	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00004797001\|UniProtKB=A0BIQ8	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_31145\|UniProtKB=B8BS27	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GLZ7_PHYRM\|UniProtKB=H3GLZ7	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_06g270900v5\|UniProtKB=A0A2K3DND5	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_08g384390v5\|UniProtKB=A0A2K3DIB3	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_01g027150v5\|UniProtKB=A0A2K3E6J0	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00090p00178540\|UniProtKB=W1P442	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_1G03770\|UniProtKB=A0A0K9PN45	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma08_g23310\|UniProtKB=A0A804K9V6	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_016137mg\|UniProtKB=K3YPE5	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G244400\|UniProtKB=A0A1Z5RPC1	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb254030\|UniProtKB=A0A1D6HJR7	Zea mays	LDO
BRADI\|EnsemblGenome=BRADI_3g59790v3\|UniProtKB=A0A0Q3IP70	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0616160\|UniProtKB=A0A8I6XXA4	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6D02G291500\|UniProtKB=A0A3B6QL98	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS6A02G312100\|UniProtKB=A0A3B6NU70	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G342300\|UniProtKB=A0A3B6PPZ2	Triticum aestivum	LDO
NELNU\|Gene=LOC104607996\|UniProtKB=A0A1U8AVU1	Nelumbo nucifera	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr15g0690211\|UniProtKB=A0A9K3H1W0	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr15g0476051\|UniProtKB=A0A251S806	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300121150\|UniProtKB=A0A9R1W4X1	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000418mg\|UniProtKB=A0A022QL32	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_27493\|UniProtKB=A0A1U8EMP1	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400022635\|UniProtKB=M1C2F9	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc05g006530.3\|UniProtKB=A0A3Q7GDS1	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107809361\|UniProtKB=A0A1S4BKN4	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107802326\|UniProtKB=A0A1S4AX76	Nicotiana tabacum	O
EUCGR\|EnsemblGenome=EUGRSUZ_B03380\|UniProtKB=A0A059D968	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra016240\|UniProtKB=M4DIB3	Brassica campestris	LDO
GOSHI\|Gene=LOC107903689\|UniProtKB=A0A1U8J4Q3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107886318\|UniProtKB=A0A1U8HI20	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_010129\|UniProtKB=A0A061E5K5	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g001047mg\|UniProtKB=A0A067GVD8	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_05G093300\|UniProtKB=A0A2C9VWX3	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0699620\|UniProtKB=B9S2H8	Ricinus communis	LDO
MEDTR\|EnsemblGenome=MTR_5g036660\|UniProtKB=G7K5N2	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_5G484640\|UniProtKB=A0A0A0KNK4	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G262200\|UniProtKB=M5Y8A0	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_440019\|UniProtKB=D8R9G4	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c17_9310\|UniProtKB=A0A2K1J392	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c13_6210\|UniProtKB=A0A2K1JKX9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_20390\|UniProtKB=A0A2K1KP95	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0098s0053\|UniProtKB=A0A2R6WF82	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000560110\|UniProtKB=A0A1Y1HU47	Klebsormidium nitens	LDO
CHLRE\|EnsemblGenome=CHLRE_11g482483v5\|UniProtKB=A0A2K3D8T8	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00029p00206820\|UniProtKB=W1PI76	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_7G01800\|UniProtKB=A0A0K9NNH0	Zostera marina	O
MUSAM\|EnsemblGenome=Ma09_g03720\|UniProtKB=A0A804KFN0	Musa acuminata subsp. malaccensis	O
SORBI\|EnsemblGenome=SORBI_3004G048800\|UniProtKB=A0A194YMR2	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb232660\|UniProtKB=A0A804PEX9	Zea mays	O
BRADI\|EnsemblGenome=BRADI_3g04550v3\|UniProtKB=I1HXF9	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0564930\|UniProtKB=A0A8I7BGL9	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS6B02G161800\|UniProtKB=A0A3B6PHG1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G133400\|UniProtKB=A0A3B6NMH3	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_028089\|UniProtKB=A0A1U7ZT07	Nelumbo nucifera	O
SPIOL\|Gene=LOC110792682\|UniProtKB=A0A9R0IPQ1	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0436881\|UniProtKB=A0A251TK88	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C400183270\|UniProtKB=A0A9R1VU39	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a000291mg\|UniProtKB=A0A022S153	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_16208\|UniProtKB=A0A1U8GX39	Capsicum annuum	O
SOLLC\|EnsemblGenome=Solyc06g005990.3\|UniProtKB=A0A3Q7GRN6	Solanum lycopersicum	O
TOBAC\|Gene=LOC107804228\|UniProtKB=A0A1S4B3R1	Nicotiana tabacum	O
TOBAC\|Gene=LOC107829143\|UniProtKB=A0A1S4DFF4	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi06g00580\|UniProtKB=F6GUV1	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_B02279\|UniProtKB=A0A059D515	Eucalyptus grandis	O
BRACM\|EnsemblGenome=Bra018181\|UniProtKB=M4DNU3	Brassica campestris	O
ARATH\|TAIR=locus=2075566\|UniProtKB=F4JAA5	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107950212\|UniProtKB=A0A1U8NNE3	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_041685\|UniProtKB=A0A061GXA3	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g039491mg\|UniProtKB=A0A067FTK2	Citrus sinensis	O
POPTR\|Gene_ORFName=POPTR_009G041200\|UniProtKB=A0A3N7GA87	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_01G165300\|UniProtKB=A0A2C9WLC4	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0730930\|UniProtKB=B9S370	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_18G067400\|UniProtKB=I1N032	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g462290\|UniProtKB=A0A072UXI0	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr14_09780\|UniProtKB=A0A2I4FUW4	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_1G528500\|UniProtKB=A0A0A0LV33	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_6G062900\|UniProtKB=A0A251NL33	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_403447\|UniProtKB=D8QRF8	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_441420\|UniProtKB=D8RJE3	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c20_11040\|UniProtKB=A0A2K1IUW9	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0005s0056\|UniProtKB=A0A2R6XQS0	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000240010\|UniProtKB=A0A1Y1HQ11	Klebsormidium nitens	O
CLOBH\|Gene_OrderedLocusName=CBO1365\|UniProtKB=A5I1J9	Clostridium botulinum	LDO
AQUAE\|EnsemblGenome=aq_1328\|UniProtKB=O67347	Aquifex aeolicus	LDO
THEYD\|EnsemblGenome=THEYE_A0439\|UniProtKB=B5YJ70	Thermodesulfovibrio yellowstonii	LDO
BRADU\|Gene=mgpS\|UniProtKB=Q89XZ6	Bradyrhizobium diazoefficiens	LDO
ECOLI\|EnsemblGenome=BAE76762\|UniProtKB=P52126	Escherichia coli	LDO