PANTHER Gene Information

Gene Symbol(s):

Organism:

Solanum lycopersicum

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Gene Name:

Arginine_serine-rich splicing factor

Gene ID:

Solyc09g005980.3

Protein ID:

A0A3Q7IS28

Persistent Id:

PTN007737661

Alternate Ids:

A0A3Q7IS28(Synonym)	A0A3Q7IS28_SOLLC(UniProtKB-ID)
Solyc09g005980(Ensembl)
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PANTHER Classification

PANTHER Family:	SERINE/ARGININE RICH SPLICING FACTOR (PTHR23147)
PANTHER Subfamily:	OS01G0155600 PROTEIN (PTHR23147:SF75)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	nuclear speck
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	mRNA splicing, via spliceosome
GO CC Complete:	nuclear speck

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PLAF7\|EnsemblGenome=PF3D7_1107100\|UniProtKB=Q8IIT2	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00001917001\|UniProtKB=A0D759	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00005162001\|UniProtKB=A0BPE6	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00027828001\|UniProtKB=A0BE29	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00012994001\|UniProtKB=A0D392	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00017625001\|UniProtKB=A0DJR4	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00015793001\|UniProtKB=A0DD17	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00008423001\|UniProtKB=A0CMC7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00027044001\|UniProtKB=A0EHC9	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00030796001\|UniProtKB=A0BNP0	Paramecium tetraurelia	LDO
AMBTC\|EnsemblGenome=AMTR_s00007p00189640\|UniProtKB=W1PBN5	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_152G00020\|UniProtKB=A0A0K9PW51	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma10_g13540\|UniProtKB=A0A804KVU0	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma06_g17010\|UniProtKB=A0A804JH62	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_012538mg\|UniProtKB=K3YE77	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3009G056100\|UniProtKB=A0A1B6P717	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3009G055700\|UniProtKB=A0A1B6P6Q9	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb282350\|UniProtKB=A0A804PZS1	Zea mays	O
ORYSJ\|EnsemblGenome=Os05g0162600\|UniProtKB=Q75IR8	Oryza sativa	O
MUSAM\|EnsemblGenome=Ma11_g22250\|UniProtKB=A0A804LAP2	Musa acuminata subsp. malaccensis	LDO
MUSAM\|EnsemblGenome=Ma05_g31590\|UniProtKB=A0A804JAQ7	Musa acuminata subsp. malaccensis	LDO
SORBI\|EnsemblGenome=SORBI_3009G022100\|UniProtKB=C5YZ00	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb265820\|UniProtKB=B6SRP6	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb355360\|UniProtKB=C0PP56	Zea mays	O
ORYSJ\|EnsemblGenome=Os05g0120100\|UniProtKB=Q0DL70	Oryza sativa	O
ORYSJ\|EnsemblGenome=Os03g0285900\|UniProtKB=Q10N19	Oryza sativa	O
WHEAT\|EnsemblGenome=TraesCS1D02G051900\|UniProtKB=A0A3B5ZQB3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G049700\|UniProtKB=A0A3B5XUH9	Triticum aestivum	O
SETIT\|EnsemblGenome=SETIT_022610mg\|UniProtKB=K3Z7U0	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_022120mg\|UniProtKB=K3Z6F1	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3009G022200\|UniProtKB=M1HAF9	Sorghum bicolor	O
BRADI\|EnsemblGenome=BRADI_2g37640v3\|UniProtKB=I1HMF7	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0010470\|UniProtKB=A0A8I6W429	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS1B02G065900\|UniProtKB=A0A3B5YRN8	Triticum aestivum	O
SETIT\|EnsemblGenome=SETIT_002387mg\|UniProtKB=K3XKG4	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3009G056032\|UniProtKB=A0A1Z5R127	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3003G064400\|UniProtKB=C5XPA0	Sorghum bicolor	LDO
ORYSJ\|EnsemblGenome=Os01g0155600\|UniProtKB=Q5ZCD9	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_2g34687v3\|UniProtKB=I1HLH5	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0025350\|UniProtKB=F2E7T0	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS1B02G130200\|UniProtKB=A0A3B5YV12	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G108000\|UniProtKB=A0A3B5XW86	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G111000\|UniProtKB=A0A3B5ZQL5	Triticum aestivum	O
BRADI\|EnsemblGenome=BRADI_2g00370v3\|UniProtKB=I1HB27	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS3B02G151100\|UniProtKB=W5CTF5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G308000\|UniProtKB=A0A3B6ELJ5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS3D02G134500\|UniProtKB=A0A3B6GNA1	Triticum aestivum	LDO
NELNU\|Gene=LOC104594688\|UniProtKB=A0A1U7ZHS7	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110783377\|UniProtKB=A0A9R0I6I4	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0663571\|UniProtKB=A0A251SQK4	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr08g0331141\|UniProtKB=A0A9K3IDE0	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr08g0219481\|UniProtKB=A0A251U440	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200092680\|UniProtKB=A0A9R1WAY9	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a011263mg\|UniProtKB=A0A022RNL8	Erythranthe guttata	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400023919\|UniProtKB=M1C7J2	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107764629\|UniProtKB=A0A1S3XFW3	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107817167\|UniProtKB=A0A1S4CBB0	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi13g00214\|UniProtKB=F6HC22	Vitis vinifera	LDO
BRANA\|Gene_ORFName=DARMORV10_A03P20610.1\|UniProtKB=A0A078IC09	Brassica napus	O
BRACM\|EnsemblGenome=Bra023114\|UniProtKB=M4E2W3	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00007699001\|UniProtKB=A0A078INW5	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C06P21470.1\|UniProtKB=A0A078F2K0	Brassica napus	O
BRACM\|EnsemblGenome=Bra003139\|UniProtKB=M4CG07	Brassica campestris	O
ARATH\|TAIR=locus=2049766\|UniProtKB=Q8VYA5	Arabidopsis thaliana	O
BRANA\|Gene_ORFName=DARMORV10_A05P39460.1\|UniProtKB=A0A078I3S3	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C05P58480.1\|UniProtKB=A0A078HW43	Brassica napus	O
BRACM\|EnsemblGenome=Bra029777\|UniProtKB=M4ELV7	Brassica campestris	O
BRACM\|EnsemblGenome=Bra007004\|UniProtKB=M4CS12	Brassica campestris	O
ARATH\|TAIR=locus=2083936\|UniProtKB=Q9FYB7	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107905262\|UniProtKB=A0A1U8JF56	Gossypium hirsutum	O
GOSHI\|Gene=LOC107957972\|UniProtKB=A0A1U8PD74	Gossypium hirsutum	O
MANES\|EnsemblGenome=MANES_08G000200\|UniProtKB=A0A2C9VDM2	Manihot esculenta	O
EUCGR\|EnsemblGenome=EUGRSUZ_G02779\|UniProtKB=A0A059BGT8	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A03P00880.1\|UniProtKB=A0A078FGP0	Brassica napus	LDO
GOSHI\|Gene=LOC107891162\|UniProtKB=A0A1U8HZB2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107940811\|UniProtKB=A0A1U8MW03	Gossypium hirsutum	O
GOSHI\|Gene=LOC107899769\|UniProtKB=A0A1U8ISJ7	Gossypium hirsutum	O
GOSHI\|Gene=LOC107920420\|UniProtKB=A0A1U8KX07	Gossypium hirsutum	O
GOSHI\|Gene=LOC107930734\|UniProtKB=A0A1U8LX04	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107941565\|UniProtKB=A0A1U8MYE4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107934199\|UniProtKB=A0A1U8M936	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_022039\|UniProtKB=A0A061ERP0	Theobroma cacao	O
THECC\|EnsemblGenome=TCM_043024\|UniProtKB=A0A061FM73	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g021599mg\|UniProtKB=A0A067FNY8	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_006G215200v3\|UniProtKB=B9HCB7	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_016G081700v3\|UniProtKB=B9IIW9	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_09G072000\|UniProtKB=A0A251K595	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0820310\|UniProtKB=B9SGV2	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_08G074600\|UniProtKB=A0A0R0IPC8	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_03G175600\|UniProtKB=I1JPG4	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_19G176100\|UniProtKB=I1NA27	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_03G175400\|UniProtKB=I1JPG3	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G176200\|UniProtKB=I1NA32	Glycine max	LDO
JUGRE\|EnsemblGenome=Jr12_22580\|UniProtKB=A0A2I4FXX1	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr07_35640\|UniProtKB=A0A2I4H322	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr03_22720\|UniProtKB=A0A2I4E281	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G177110\|UniProtKB=A0A0A0KS31	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G224200\|UniProtKB=M5XEI5	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_6G246100\|UniProtKB=A0A251NVA8	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_415978\|UniProtKB=D8RXP6	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_409589\|UniProtKB=D8RBX8	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c17_20550\|UniProtKB=A0A7I4BFB7	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c14_23400\|UniProtKB=A0A7I4ASK3	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0052s0092\|UniProtKB=A0A2R6WWS9	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000380300\|UniProtKB=A0A1Y1HTD5	Klebsormidium nitens	LDO