PANTHER Gene Information

Gene Symbol(s):

101252541

Organism:

Solanum lycopersicum

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Gene Name:

DEAD-box ATP-dependent RNA helicase 38

Gene ID:

Solyc10g085790.2

Protein ID:

A0A3Q7JGX3

Persistent Id:

PTN008254862

Alternate Ids:

460408311(GI)	Solyc10g085790(Ensembl)
XP_004249589(refSeq)	A0A3Q7JGX3_SOLLC(UniProtKB-ID)
A0A3Q7JGX3(Synonym)	101252541(GeneID)
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PANTHER Classification

PANTHER Family:	ATP-DEPENDENT RNA HELICASE DBP3 (PTHR47958)
PANTHER Subfamily:	RNA HELICASE (PTHR47958:SF31)
PANTHER GO-slim Molecular Function:	helicase activity mRNA binding catalytic activity, acting on RNA
PANTHER GO-slim Biological Process:	poly(A)+ mRNA export from nucleus
PANTHER GO-slim Cellular Component:	cytoplasmic stress granule nucleus
PANTHER protein class:	RNA helicase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA helicase activity, mRNA binding
GO BP Complete:	poly(A)+ mRNA export from nucleus
GO CC Complete:	nucleus, cytoplasmic stress granule

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=18698\|UniProtKB=Q9UHL0	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000004450.4\|UniProtKB=G2HIP9	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000015054.3\|UniProtKB=G3RGF3	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000007624.4\|UniProtKB=G7NCX9	Macaca mulatta	O
MOUSE\|MGI=MGI=1353582\|UniProtKB=Q9QY15	Mus musculus	O
RAT\|RGD=68381\|UniProtKB=Q9QY16	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000004266.6\|UniProtKB=F1MSI6	Bos taurus	O
BOVIN\|Gene=DDX25\|UniProtKB=Q2TBP1	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000015223.5\|UniProtKB=F1S758	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000009643.4\|UniProtKB=F7BDQ9	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000005341.6\|UniProtKB=A0A2I2U5E8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845010150.1\|UniProtKB=A0A8I3NG65	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000004275.4\|UniProtKB=F6TEM9	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000012968.4\|UniProtKB=A0A6I8P2Q9	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010029482.1\|UniProtKB=A0A8V1AIK2	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000000173.4\|UniProtKB=H9G3C5	Anolis carolinensis	O
HUMAN\|HGNC=25628\|UniProtKB=Q9NUU7	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000008298.5\|UniProtKB=A0A2I3THU3	Pan troglodytes	O
PANTR\|Ensembl=ENSPTRG00000008301.7\|UniProtKB=A0A2I3RLG2	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000008816.3\|UniProtKB=A0A2I2ZJY9	Gorilla gorilla gorilla	O
HUMAN\|HGNC=2742\|UniProtKB=Q9UMR2	Homo sapiens	LDO
GORGO\|Ensembl=ENSGGOG00000036768.1\|UniProtKB=A0A2I2ZDA7	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000020316.4\|UniProtKB=F6WP43	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2148251\|UniProtKB=Q8R3C7	Mus musculus	O
MOUSE\|MGI=MGI=99526\|UniProtKB=Q61655	Mus musculus	LDO
RAT\|RGD=1593382\|UniProtKB=A0A8I6GAE6	Rattus norvegicus	LDO
PIG\|Ensembl=ENSSSCG00000002722.5\|UniProtKB=F1S432	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000017635.4\|UniProtKB=A0A5F5PU62	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000029489.4\|UniProtKB=A0A2I2U2U3	Felis catus	LDO
BOVIN\|Ensembl=ENSBTAG00000020714.4\|UniProtKB=A0A3Q1NK64	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000003570\|UniProtKB=Q3ZBV2	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000060523.1\|UniProtKB=A0A480Q3H5	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000051660.1\|UniProtKB=A0A5F5PWQ6	Equus caballus	O
CANLF\|Ensembl=ENSCAFG00845005025.1\|UniProtKB=A0A8I3MZ49	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000014494.4\|UniProtKB=A0A5F8GBP1	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000049966.1\|UniProtKB=A0A6I8PEB1	Ornithorhynchus anatinus	O
ORNAN\|Ensembl=ENSOANG00000007568.3\|UniProtKB=F6RTA0	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010020786.1\|UniProtKB=A0A8V0ZEN5	Gallus gallus	LDO
XENLA\|Gene=deadsouth\|UniProtKB=Q9DGP9	Xenopus laevis	O
XENLA\|Gene=ddx25.L\|UniProtKB=A0A8J1L488	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-958136\|UniProtKB=Q28GJ1	Xenopus tropicalis	O
XENLA\|Gene=ddx19b.S\|UniProtKB=Q7ZWV1	Xenopus laevis	O
XENLA\|Gene=ddx19b.L\|UniProtKB=A0A1L8FPD8	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5902964\|UniProtKB=Q6P887	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000015931.2\|UniProtKB=A0A3B3HPT1	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000016216.2\|UniProtKB=H2MNJ1	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-080721-12\|UniProtKB=B3DFU8	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-020419-30\|UniProtKB=Q8JGR1	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002118.1\|UniProtKB=W5M273	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000007756.3\|UniProtKB=F6XTY4	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118430872\|UniProtKB=A0A9J7MBH3	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC589338\|UniProtKB=A0A7M7NXE9	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00011580\|UniProtKB=Q22308	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG03203\|UniProtKB=A8WSK0	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00112279\|UniProtKB=A0A2A6B8J9	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0024804\|UniProtKB=O61305	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003397\|UniProtKB=Q7QDK9	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC014047\|UniProtKB=D6WJW8	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_306525\|UniProtKB=E9FYK7	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW005709\|UniProtKB=B7PQJ9	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG104410\|UniProtKB=T1EDL5	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g89179\|UniProtKB=A7RPJ2	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG50410\|UniProtKB=B3RZN1	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_14272\|UniProtKB=A9USP7	Monosiga brevicollis	LDO
YEAST\|SGD=S000005572\|UniProtKB=P20449	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_ACR078W\|UniProtKB=Q75C39	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000188126\|UniProtKB=Q5AJD0	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E31427g\|UniProtKB=Q6C3X7	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_07659\|UniProtKB=Q5AVM1	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G01210\|UniProtKB=Q4WIN6	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01160\|UniProtKB=Q8X0X2	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_10291\|UniProtKB=A7EY76	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_10595\|UniProtKB=Q0UCB9	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC12C2.06\|UniProtKB=Q09747	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_04480\|UniProtKB=B6K6Y0	Schizosaccharomyces japonicus	LDO
CRYNJ\|Gene_OrderedLocusName=CNI01880\|UniProtKB=P0CQ86	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_03765\|UniProtKB=Q4P7Z8	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_19040\|UniProtKB=E3L8N6	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_13134\|UniProtKB=F4P825	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0281553\|UniProtKB=Q54TF8	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_85413\|UniProtKB=F1A5N0	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_127300\|UniProtKB=A2E7Z7	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1459000\|UniProtKB=Q8IKP1	Plasmodium falciparum	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_39864\|UniProtKB=B8BXP3	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G791_PHYRM\|UniProtKB=H3G791	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_06g306850v5\|UniProtKB=A0A2K3DRJ8	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00049p00197330\|UniProtKB=W1PZZ2	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_72G00060\|UniProtKB=A0A0K9NPX7	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma06_g15690\|UniProtKB=A0A804JGM8	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma10_g14720\|UniProtKB=A0A804KW79	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_035336mg\|UniProtKB=K4A8Y0	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G498400\|UniProtKB=C5WXS7	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb004400\|UniProtKB=B6SLS0	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0158200\|UniProtKB=Q10RI7	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g74580v3\|UniProtKB=I1H9J1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0401510\|UniProtKB=F2E4I7	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4D02G272900\|UniProtKB=A0A3B6JMK0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G532700\|UniProtKB=A0A3B6N239	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G274200\|UniProtKB=A0A3B6IX48	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5B02G534600\|UniProtKB=A0A3B6LXT9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G340500\|UniProtKB=A0A3B6HYN6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCSU02G076700\|UniProtKB=A0A3B6U0E9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G031800\|UniProtKB=A0A3B6HND4	Triticum aestivum	LDO
NELNU\|Gene=LOC104604617\|UniProtKB=A0A1U8AMP6	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110799416\|UniProtKB=A0A9R0J5M6	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr11g0350701\|UniProtKB=A0A251TF69	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0668571\|UniProtKB=A0A251SLY8	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0667911\|UniProtKB=A0A251SMD6	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr11g0515651\|UniProtKB=A0A9K3N2J3	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0755991\|UniProtKB=A0A251S0S5	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C100021050\|UniProtKB=A0A9R1WL38	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a005088mg\|UniProtKB=A0A022RRN1	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_25778\|UniProtKB=A0A2G2YLT7	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400008589\|UniProtKB=M1AG92	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107814119\|UniProtKB=A0A1S4C1B1	Nicotiana tabacum	O
TOBAC\|Gene=LOC107782346\|UniProtKB=A0A1S3Z2W4	Nicotiana tabacum	O
TOBAC\|Gene=LOC107825795\|UniProtKB=A0A1S4D4A7	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_08s0007g04430\|UniProtKB=F6HKE9	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi08g02283\|UniProtKB=F6HKF1	Vitis vinifera	LDO
VITVI\|Gene_ORFName=VIT_00s2262g00010\|UniProtKB=F6HWY8	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_K02417\|UniProtKB=A0A059A4W5	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00071315001\|UniProtKB=A0A078FK29	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra040687\|UniProtKB=M4FHV8	Brassica campestris	O
BRACM\|EnsemblGenome=Bra028547\|UniProtKB=M4EID2	Brassica campestris	LDO
ARATH\|TAIR=locus=2101993\|UniProtKB=Q93ZG7	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107899509\|UniProtKB=A0A1U8IRK9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107931802\|UniProtKB=A0A1U8M101	Gossypium hirsutum	O
GOSHI\|Gene=LOC107931533\|UniProtKB=A0A1U8M071	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_022361\|UniProtKB=A0A061ETP8	Theobroma cacao	LDO
POPTR\|EnsemblGenome=POPTR_006G119000v3\|UniProtKB=B9MTK9	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_08G015700\|UniProtKB=A0A2C9VCK1	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1353030\|UniProtKB=B9S0B8	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_19G027600\|UniProtKB=I1N696	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_18G155900\|UniProtKB=I1N1X2	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_0427s0010\|UniProtKB=A0A072TEZ9	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_4g049910\|UniProtKB=A0A072UIW9	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_1g061970\|UniProtKB=G7IA59	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr03_00640\|UniProtKB=A0A2I4GJP2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G746560\|UniProtKB=A0A0A0LDT3	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_5G308770\|UniProtKB=A0A0A0KR39	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G122600\|UniProtKB=A0A251NAI7	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_160867\|UniProtKB=D8T4B5	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_43856\|UniProtKB=D8TDV0	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_447130\|UniProtKB=D8SWZ8	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_43861\|UniProtKB=D8SWU7	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c2_24110\|UniProtKB=A0A2K1L2V1	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c7_14910\|UniProtKB=A0A2K1KBR9	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0035s0045\|UniProtKB=A0A2R6X578	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001050280\|UniProtKB=A0A1Y1HUF5	Klebsormidium nitens	LDO
NITMS\|EnsemblGenome=Nmar_1182\|UniProtKB=A9A5S3	Nitrosopumilus maritimus	O
SACS2\|EnsemblGenome=SSO2036\|UniProtKB=Q97WT0	Sulfolobus solfataricus	O
SACS2\|EnsemblGenome=SSO1889\|UniProtKB=Q97X64	Sulfolobus solfataricus	O