PANTHER Gene Information

Gene Symbol(s):

rpoC1

Organism:

Solanum lycopersicum

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Gene Name:

DNA-directed RNA polymerase subunit beta'

Gene ID:

rpoC1

Protein ID:

Q2MIA9

Persistent Id:

PTN001834471

Alternate Ids:

544163604(GI)	AC_000188(refSeq)
AM087200(EMBL)	ABC56291(EMBL-CDS)
rpoC1{ECO:0000255\|HAMAP-Rule:MF_01323}(Symbol)	2.7.7.6 {ECO:0000255\|HAMAP-Rule:MF_01323}(EC)
3950486(GeneID)	PEP {ECO:0000255\|HAMAP-Rule:MF_01323}(Synonym)
RPOC1_SOLLC(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	DNA-DIRECTED RNA POLYMERASE (PTHR19376)
PANTHER Subfamily:	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' (PTHR19376:SF54)
PANTHER GO-slim Molecular Function:	DNA-directed 5'-3' RNA polymerase activity
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	DNA-directed RNA polymerase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	DNA-directed 5'-3' RNA polymerase activity
GO BP Complete:	-
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PLAF7\|Gene_ORFName=PF3D7_API04300\|UniProtKB=A0A140KXX4	Plasmodium falciparum	LDO
PLAF7\|Gene_ORFName=PF3D7_API04200\|UniProtKB=Q25802	Plasmodium falciparum	O
PLAF7\|Gene=rpoC1\|UniProtKB=P21422	Plasmodium falciparum	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_bd997\|UniProtKB=B8LEQ1	Thalassiosira pseudonana	LDO
AMBTC\|Gene=rpoC1\|UniProtKB=P60287	Amborella trichopoda	LDO
SETIT\|EnsemblGenome=SETIT_020782mg\|UniProtKB=K3Z2L4	Setaria italica	LDO
SORBI\|Gene=rpoC1\|UniProtKB=A1E9R5	Sorghum bicolor	LDO
MAIZE\|Gene=rpoC1\|UniProtKB=P16024	Zea mays	LDO
ORYSJ\|Gene_OrderedLocusName=LOC_Osp1g00250\|UniProtKB=P0C506	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g17461v3\|UniProtKB=A0A0Q3ELG0	Brachypodium distachyon	O
BRADI\|Gene=rpoC1\|UniProtKB=B3TN43	Brachypodium distachyon	LDO
BRADI\|EnsemblGenome=BRADI_5g23815v3\|UniProtKB=A0A2K2CIY2	Brachypodium distachyon	O
WHEAT\|EnsemblGenome=TraesKARUn01G0035990\|UniProtKB=Q9XPS8	Triticum aestivum	LDO
NELNU\|Gene_ORFName=N623_p074\|UniProtKB=D3WC94	Nelumbo nucifera	LDO
SPIOL\|Gene=rpoC1\|UniProtKB=P11705	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0209381\|UniProtKB=A0A251U9I0	Helianthus annuus	LDO
CAPAN\|EnsemblGenome=T459_02523\|UniProtKB=A0A2G3AK61	Capsicum annuum	LDO
SOLTU\|Gene=rpoC1\|UniProtKB=Q2VEI5	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG402029613\|UniProtKB=M1CW95	Solanum tuberosum	LDO
TOBAC\|Gene_ORFName=NitaCp011\|UniProtKB=A0A140G1Q3	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi09g01607\|UniProtKB=Q0ZJ29	Vitis vinifera	LDO
BRANA\|Gene_ORFName=GSBRNA2T00015397001\|UniProtKB=A0A078G842	Brassica napus	LDO
ARATH\|TAIR=locus=504954642\|UniProtKB=P56763	Arabidopsis thaliana	LDO
GOSHI\|Gene=rpoC1\|UniProtKB=Q2L8Z4	Gossypium hirsutum	LDO
GOSHI\|Gene_ORFName=GohiCp012\|UniProtKB=H9LHI4	Gossypium hirsutum	LDO
POPTR\|Gene_OrderedLocusName=Poptr_cp011\|UniProtKB=A4GYP9	Populus trichocarpa	LDO
RICCO\|Gene_ORFName=RCOM_ORF00020\|UniProtKB=G1D749	Ricinus communis	LDO
SOYBN\|Gene=rpoC1\|UniProtKB=Q8HVY4	Glycine max	LDO
MEDTR\|Gene=rpoC1\|UniProtKB=S4T090	Medicago truncatula	LDO
MEDTR\|EnsemblGenome=MTR_3g062770\|UniProtKB=G7IV68	Medicago truncatula	LDO
JUGRE\|Gene_ORFName=AT063_gp075\|UniProtKB=A0A0S2M9V8	Juglans regia	LDO
PRUPE\|Gene=rpoC1\|UniProtKB=E3W0I4	Prunus persica	LDO
PHYPA\|Gene=rpoC1\|UniProtKB=P60288	Physcomitrella patens	LDO
CHLAA\|EnsemblGenome=Caur_0873\|UniProtKB=A9WH11	Chloroflexus aurantiacus	LDO
STRCO\|Gene_OrderedLocusName=SCO4655\|UniProtKB=Q8CJT1	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv0668\|UniProtKB=P9WGY7	Mycobacterium tuberculosis	LDO
MYCGE\|EnsemblGenome=MG_340\|UniProtKB=P47582	mycoplasma genitalium	LDO
STRR6\|EnsemblGenome=spr1776\|UniProtKB=Q8DNF1	Streptococcus pneumoniae	LDO
STAA8\|EnsemblGenome=SAOUHSC_00525\|UniProtKB=Q2G0N5	Staphylococcus aureus	LDO
LISMO\|EnsemblGenome=CAD00786\|UniProtKB=Q8YA96	Listeria monocytogenes	LDO
BACSU\|EnsemblGenome=BSU_01080\|UniProtKB=P37871	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_0123\|UniProtKB=Q81J47	Bacillus cereus	LDO
THEMA\|EnsemblGenome=TM_0459\|UniProtKB=P36252	Thermotoga maritima	LDO
DEIRA\|EnsemblGenome=DR_0911\|UniProtKB=Q9RVW0	Deinococcus radiodurans	LDO
LEPIN\|EnsemblGenome=LA_3419\|UniProtKB=Q8F0S3	Leptospira interrogans	LDO
BACTN\|EnsemblGenome=BT_2733\|UniProtKB=Q8A470	Bacteroides thetaiotaomicron	LDO
CHLTR\|EnsemblGenome=CT_314\|UniProtKB=O84316	Chlamydia trachomatis	LDO
RHOBA\|EnsemblGenome=RB5416\|UniProtKB=Q7URW4	Rhodopirellula baltica	LDO
AQUAE\|EnsemblGenome=aq_1945\|UniProtKB=O67763	Aquifex aeolicus	LDO
THEYD\|EnsemblGenome=THEYE_A1346\|UniProtKB=B5YFV7	Thermodesulfovibrio yellowstonii	LDO
DICTD\|EnsemblGenome=Dtur_0975\|UniProtKB=B8E1C7	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN2035\|UniProtKB=Q8RHI7	Fusobacterium nucleatum	LDO
HELPY\|EnsemblGenome=HP_1198\|UniProtKB=O25806	Helicobacter pylori	LDO
NEIMB\|EnsemblGenome=NMB0133\|UniProtKB=Q9K1J1	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU2862\|UniProtKB=I7EPD8	Geobacter sulfurreducens	LDO
BRADU\|EnsemblGenome=BAC50674\|UniProtKB=Q89J75	Bradyrhizobium diazoefficiens	LDO
COXBU\|EnsemblGenome=CBU_0232\|UniProtKB=Q83ET0	Coxiella burnetii	LDO
HAEIN\|EnsemblGenome=HI_0514\|UniProtKB=P43739	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_0225\|UniProtKB=Q8EK73	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_0329\|UniProtKB=Q9KV29	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC0889\|UniProtKB=Q8PC55	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA4269\|UniProtKB=Q9HWC9	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM4154\|UniProtKB=P0A2R4	Salmonella typhimurium	LDO
YERPE\|EnsemblGenome=YP_3109\|UniProtKB=Q8D1H3	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE77332\|UniProtKB=P0A8T7	Escherichia coli	LDO