PANTHER Gene Information

Gene Symbol(s):

102603948

Organism:

Solanum tuberosum

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Tree

Gene Name:

Splicing factor 3B subunit

Gene ID:

PGSC0003DMG400022432

Protein ID:

M1C1N2

Persistent Id:

PTN007590994

Alternate Ids:

565360645(GI)	M1C1N2(Synonym)
M1C1N2_SOLTU(UniProtKB-ID)	XM_006347015(refSeq)
PGSC0003DMG400022432(Ensembl)	102603948(GeneID)
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PANTHER Classification

PANTHER Family:	SPLICING FACTOR 3B (PTHR12785)
PANTHER Subfamily:	SPLICING FACTOR 3B SUBUNIT 2-LIKE (PTHR12785:SF13)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	mRNA splicing, via spliceosome
GO CC Complete:	nucleus, catalytic step 2 spliceosome, precatalytic spliceosome, U2-type spliceosomal complex, U2 snRNP

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=10769\|UniProtKB=Q13435	Homo sapiens	O
GORGO\|Ensembl=ENSGGOG00000028448.2\|UniProtKB=G3SFS9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000011743.4\|UniProtKB=G7NC70	Macaca mulatta	O
MOUSE\|MGI=MGI=2441856\|UniProtKB=Q3UJB0	Mus musculus	O
RAT\|RGD=1307159\|UniProtKB=A0A8I6A8Y6	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000002778.6\|UniProtKB=F1MC31	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000012957.5\|UniProtKB=F1RU38	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000024461.4\|UniProtKB=A0A9L0RE13	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000013289.5\|UniProtKB=M3WIL1	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845014133.1\|UniProtKB=A0A8I3NV69	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000008490.4\|UniProtKB=F7G448	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000012482.4\|UniProtKB=A0A6I8P813	Ornithorhynchus anatinus	O
ANOCA\|Ensembl=ENSACAG00000008615.3\|UniProtKB=H9GQ49	Anolis carolinensis	O
XENLA\|Gene=sf3b2.S\|UniProtKB=A0A8J0V556	Xenopus laevis	O
XENLA\|Gene=sf3b2.L\|UniProtKB=Q52KT1	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-5875780\|UniProtKB=A0A6I8Q354	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000008235.3\|UniProtKB=H2LW52	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-070928-1\|UniProtKB=A7YT51	Danio rerio	O
CIOIN\|Ensembl=ENSCING00000005665.3\|UniProtKB=F6Y1N2	Ciona intestinalis	O
BRAFL\|Gene=LOC118426559\|UniProtKB=A0A9J7M0Q5	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC580638\|UniProtKB=A0A7M7PQV5	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00021004\|UniProtKB=O16997	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00028723\|UniProtKB=A8X292	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00272368\|UniProtKB=A0A454XJ31	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0031493\|UniProtKB=Q9VQK7	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP006240\|UniProtKB=A0A1S4GSG6	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC008829\|UniProtKB=D6WR66	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_222752\|UniProtKB=E9G5Y0	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_187692\|UniProtKB=E9G5Y1	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW006575\|UniProtKB=B7PPS6	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG100627\|UniProtKB=T1ED08	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g186750\|UniProtKB=A7S7W8	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG20192\|UniProtKB=B3RJS6	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_37714\|UniProtKB=A9V3L6	Monosiga brevicollis	O
YEAST\|SGD=S000004853\|UniProtKB=Q02554	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AFR539C\|UniProtKB=Q752N5	Eremothecium gossypii	O
CANAL\|CGD=CAL0000196177\|UniProtKB=A0A1D8PU52	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_D05577g\|UniProtKB=Q6CA63	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_05098\|UniProtKB=C8VEV9	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_5G04420\|UniProtKB=Q4WEW4	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU05452\|UniProtKB=F5H933	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_07788\|UniProtKB=A7ER35	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_01768\|UniProtKB=Q0V2J6	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC22F8.10c\|UniProtKB=Q9UUI3	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00322\|UniProtKB=B6JVB5	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNG03090\|UniProtKB=Q5KDR1	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_05454\|UniProtKB=A0A0D1BWX5	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_06514\|UniProtKB=E3K8Z3	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_35091\|UniProtKB=F4P312	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0284555\|UniProtKB=Q1ZXF6	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_155147\|UniProtKB=F0ZT70	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_30_0570\|UniProtKB=Q4Q7P9	Leishmania major	O
TRYB2\|Gene_ORFName=Tb927.6.2000\|UniProtKB=Q584V6	Trypanosoma brucei	O
TRIV3\|Gene_ORFName=TVAG_081790\|UniProtKB=A2E6X1	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1461600\|UniProtKB=Q8IKL7	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00035567001\|UniProtKB=A0C6M1	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00034618001\|UniProtKB=A0C2X3	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_269780\|UniProtKB=B8CCL9	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GQR2_PHYRM\|UniProtKB=H3GQR2	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_12g514450v5\|UniProtKB=A0A2K3D3M7	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00131p00018630\|UniProtKB=W1NUV2	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_53G00560\|UniProtKB=A0A0K9NWY8	Zostera marina	O
MUSAM\|EnsemblGenome=Ma01_g08640\|UniProtKB=A0A804HRT1	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma02_g05830\|UniProtKB=A0A804HZN7	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_006124mg\|UniProtKB=K3XW16	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3010G278800\|UniProtKB=C5Z2N0	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb271720\|UniProtKB=A0A804UAE8	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb229010\|UniProtKB=B4FNE5	Zea mays	O
SETIT\|EnsemblGenome=SETIT_016750mg\|UniProtKB=K3YR56	Setaria italica	O
ORYSJ\|EnsemblGenome=Os02g0827300\|UniProtKB=Q6K7Q7	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g56730v3\|UniProtKB=I1IEF7	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0632380\|UniProtKB=A0A8I6Y9A1	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS6D02G132300\|UniProtKB=A0A3B6QC61	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G411000\|UniProtKB=A0A3B6NX96	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G393900\|UniProtKB=A0A3B6QNP5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G456800\|UniProtKB=A0A3B6PT63	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_024417\|UniProtKB=A0A1U7ZBS2	Nelumbo nucifera	O
NELNU\|Gene=LOC104586452\|UniProtKB=A0A1U7YVT3	Nelumbo nucifera	O
SPIOL\|Gene=LOC110795667\|UniProtKB=A0A9R0IVH1	Spinacia oleracea	O
HELAN\|Gene_ORFName=HannXRQ_Chr16g0518241\|UniProtKB=A0A251S0M4	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr16g0756341\|UniProtKB=A0A9K3DS89	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr11g0498681\|UniProtKB=A0A251UVR3	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100048210\|UniProtKB=A0A9R1WR28	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a003331mg\|UniProtKB=A0A022RUJ2	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_05683\|UniProtKB=A0A1U8FKY4	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc02g078610.3\|UniProtKB=A0A3Q7FR37	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107808380\|UniProtKB=A0A1S4BHM7	Nicotiana tabacum	O
TOBAC\|Gene=LOC107771044\|UniProtKB=A0A1S3Y184	Nicotiana tabacum	LDO
BRANA\|Gene_ORFName=DARMORV10_C03P83140.1\|UniProtKB=A0A078GY35	Brassica napus	O
BRACM\|EnsemblGenome=Bra013545\|UniProtKB=M4DAN5	Brassica campestris	O
BRACM\|EnsemblGenome=Bra020904\|UniProtKB=M4DWL0	Brassica campestris	O
ARATH\|TAIR=locus=2119038\|UniProtKB=A0A1P8B4Y6	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107901670\|UniProtKB=A0A1U8IYP0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107962985\|UniProtKB=A0A1U8PXR8	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_029917\|UniProtKB=A0A061GGM9	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g038777mg\|UniProtKB=A0A067EBD3	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g008032mg\|UniProtKB=A0A067GKJ9	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_004G039000v3\|UniProtKB=B9H264	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_011G047600v3\|UniProtKB=B9HYL2	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_16G024600\|UniProtKB=A0A2C9U7W2	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_17G042900\|UniProtKB=A0A2C9U4V2	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0935200\|UniProtKB=B9RZ56	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_15G071600\|UniProtKB=I1MEF2	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_13G182600\|UniProtKB=I1M0D7	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_07G194000\|UniProtKB=I1KLH4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_13G241800\|UniProtKB=I1M281	Glycine max	O
MEDTR\|EnsemblGenome=MTR_2g072100\|UniProtKB=A0A072VAN2	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_2g013350\|UniProtKB=G7IPR0	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_4g089085\|UniProtKB=A0A072UP05	Medicago truncatula	O
JUGRE\|Gene=LOC108980756\|UniProtKB=A0A6P9EMR4	Juglans regia	O
JUGRE\|EnsemblGenome=Jr04_17320\|UniProtKB=A0A2I4DS98	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_2G075450\|UniProtKB=A0A0A0LMT1	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_4G042600\|UniProtKB=A0A251PFM3	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_416762\|UniProtKB=D8S0C2	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_232603\|UniProtKB=D8RXJ6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_413512\|UniProtKB=D8RQI0	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c14_10510\|UniProtKB=A0A7I4AKY4	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c17_13490\|UniProtKB=A0A7I4B8Y3	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0051s0020\|UniProtKB=A0A2R6WX02	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001640020\|UniProtKB=A0A0U9HJV8	Klebsormidium nitens	O