PANTHER Gene Information

Gene Symbol(s):

Organism:

Solanum tuberosum

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Tree

Gene Name:

ATP-dependent Clp protease proteolytic subunit

Gene ID:

PGSC0003DMG400025349

Protein ID:

M1CDL1

Persistent Id:

PTN007438946

Alternate Ids:

M1CDL1_SOLTU(UniProtKB-ID)	PGSC0003DMG400025349(Ensembl)
M1CDL1(Synonym)
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PANTHER Classification

PANTHER Family:	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT (PTHR10381)
PANTHER Subfamily:	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC (PTHR10381:SF55)
PANTHER GO-slim Molecular Function:	ATP-dependent activity enzyme binding serine-type endopeptidase activity
PANTHER GO-slim Biological Process:	protein quality control for misfolded or incompletely synthesized proteins
PANTHER GO-slim Cellular Component:	catalytic complex
PANTHER protein class:	serine protease

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, serine-type endopeptidase activity, ATP-dependent peptidase activity, ATPase binding
GO BP Complete:	protein quality control for misfolded or incompletely synthesized proteins, proteolysis, RNA processing, rRNA processing, chloroplast organization
GO CC Complete:	chloroplast thylakoid, endopeptidase Clp complex, plastid stroma, chloroplastic endopeptidase Clp complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=2084\|UniProtKB=Q16740	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000010359.3\|UniProtKB=H2QF44	Pan troglodytes	O
MACMU\|Ensembl=ENSMMUG00000028914.3\|UniProtKB=F6YQ20	Macaca mulatta	O
MOUSE\|MGI=MGI=1858213\|UniProtKB=O88696	Mus musculus	O
RAT\|RGD=1588583\|UniProtKB=M0RAD5	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000014712\|UniProtKB=Q2KHU4	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000038079.2\|UniProtKB=A0A286ZRL1	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000023054.4\|UniProtKB=F6UF15	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000012509.5\|UniProtKB=M3WH31	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845011300.1\|UniProtKB=A0A8I3N7L4	Canis lupus familiaris	O
ORNAN\|Ensembl=ENSOANG00000012221.3\|UniProtKB=A0A6I8N9M5	Ornithorhynchus anatinus	O
ANOCA\|Ensembl=ENSACAG00000015591.4\|UniProtKB=A0A803SP96	Anolis carolinensis	O
XENLA\|Gene=clpp.S\|UniProtKB=A0A8J0TUN2	Xenopus laevis	O
XENLA\|Gene=clpp.L\|UniProtKB=Q3KQF3	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-969408\|UniProtKB=F6WLE7	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000017320.2\|UniProtKB=H2MSC2	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030131-7860\|UniProtKB=Q502B9	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000006106.1\|UniProtKB=W5MG69	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000004492.3\|UniProtKB=F7BBQ0	Ciona intestinalis	O
BRAFL\|Gene=LOC118431940\|UniProtKB=A0A9J7MDQ1	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC581816\|UniProtKB=A0A7M7RDK7	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00014172\|UniProtKB=Q27539	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00024182\|UniProtKB=A8WPG6	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00105556\|UniProtKB=A0A2A6B804	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0032229\|UniProtKB=Q9VKY3	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP009019\|UniProtKB=Q7PWC5	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC014333\|UniProtKB=D6WLD6	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC004785\|UniProtKB=D6W836	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_231060\|UniProtKB=E9GN81	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW021455\|UniProtKB=B7Q5Y0	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG84094\|UniProtKB=T1G5E6	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g192713\|UniProtKB=A7SRG8	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG64140\|UniProtKB=B3S3W8	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_25007\|UniProtKB=A9UXH9	Monosiga brevicollis	O
YARLI\|EnsemblGenome=YALI0_F12353g\|UniProtKB=Q6C1Y5	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_02972\|UniProtKB=Q5B908	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_3G08330\|UniProtKB=Q4WX60	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU04578\|UniProtKB=Q1K659	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_12432\|UniProtKB=A7F4A8	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_15785\|UniProtKB=Q0TXL9	Phaeosphaeria nodorum	O
CRYNJ\|EnsemblGenome=CNN01350\|UniProtKB=Q5K726	Cryptococcus neoformans	O
PUCGT\|EnsemblGenome=PGTG_00169\|UniProtKB=E3JRS9	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_91564\|UniProtKB=F4PAL1	Batrachochytrium dendrobatidis	O
THAPS\|EnsemblGenome=THAPSDRAFT_37359\|UniProtKB=B8CCD4	Thalassiosira pseudonana	O
CHLRE\|EnsemblGenome=CHLRE_14g619100v5\|UniProtKB=A0A2K3CXW8	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_07g331500v5\|UniProtKB=A8IH07	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00164p00068000\|UniProtKB=W1PLN1	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_183G00420\|UniProtKB=A0A0K9PQG1	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g07980\|UniProtKB=A0A804HRJ3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma02_g10250\|UniProtKB=A0A804I180	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_022291mg\|UniProtKB=K3Z6X2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3009G255300\|UniProtKB=C5YWZ8	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb297340\|UniProtKB=A0A804Q321	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os05g0592100\|UniProtKB=Q6L4S1	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_2g14460v3\|UniProtKB=I1HFT6	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS1D02G445300\|UniProtKB=A0A3B6A3I8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1B02G472100\|UniProtKB=A0A3B5Z616	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G437500\|UniProtKB=A0A3B5Y8N6	Triticum aestivum	LDO
NELNU\|Gene=LOC104587472\|UniProtKB=A0A1U7Z8L4	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110799647\|UniProtKB=A0A9R0J3N1	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0737431\|UniProtKB=A0A251RZJ1	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C700375550\|UniProtKB=A0A9R1V0U9	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a008007mg\|UniProtKB=A0A022RFU6	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a0265131mg\|UniProtKB=A0A022QUH7	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_25601\|UniProtKB=A0A2G2YL68	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc10g049710.2\|UniProtKB=A0A3Q7IFL7	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107771248\|UniProtKB=A0A1S3Y286	Nicotiana tabacum	O
TOBAC\|Gene=LOC107766615\|UniProtKB=A0A1S3XMM0	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi03g00631\|UniProtKB=D7SXR5	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I01073\|UniProtKB=A0A059AMN6	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00083635001\|UniProtKB=A0A078IAN6	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A08P03440.1\|UniProtKB=A0A078J1F8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra014229\|UniProtKB=M4DCL3	Brassica campestris	LDO
ARATH\|TAIR=locus=2031070\|UniProtKB=Q9XJ35	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107945152\|UniProtKB=A0A1U8N5X9	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107898796\|UniProtKB=A0A1U8IV98	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_007216\|UniProtKB=A0A061E852	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g029701mg\|UniProtKB=A0A067ERS4	Citrus sinensis	LDO
POPTR\|Gene_ORFName=POPTR_001G295266\|UniProtKB=A0A3N7ELC5	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_009G089300v3\|UniProtKB=B9HMY7	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_10G079900\|UniProtKB=A0A2C9V5K5	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_07G061800\|UniProtKB=A0A2C9VJ22	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0175080\|UniProtKB=B9SND4	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_20G133300\|UniProtKB=A0A0R0EAT4	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_10G257800\|UniProtKB=A0A0R0HZ75	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g106550\|UniProtKB=G7IET9	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr16_21570\|UniProtKB=A0A6P9EHN3	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr13_01860\|UniProtKB=A0A2I4GL56	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_7G071430\|UniProtKB=A0A0A0K4G3	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_8G143200\|UniProtKB=M5VJ49	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_65351\|UniProtKB=D8RFY5	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_424284\|UniProtKB=D8SPE0	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c25_4310\|UniProtKB=A0A2K1IDR7	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c16_17780\|UniProtKB=A0A2K1J942	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0165s0020\|UniProtKB=A0A2R6W3H2	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000620170\|UniProtKB=A0A1Y1HRR6	Klebsormidium nitens	LDO
LEPIN\|EnsemblGenome=LA_1953\|UniProtKB=Q8F4T6	Leptospira interrogans	O
CHLTR\|EnsemblGenome=CT_431\|UniProtKB=P38002	Chlamydia trachomatis	O
CHLAA\|EnsemblGenome=Caur_2818\|UniProtKB=A9WKE1	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_1527\|UniProtKB=A9WAW6	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO7280\|UniProtKB=Q9X7S0	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO1238\|UniProtKB=Q9FCC9	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO2618\|UniProtKB=Q9ZH58	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv2460c\|UniProtKB=P9WPC3	Mycobacterium tuberculosis	O
STRCO\|Gene_OrderedLocusName=SCO7281\|UniProtKB=Q9X7R9	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO2619\|UniProtKB=Q9F315	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv2461c\|UniProtKB=P9WPC5	Mycobacterium tuberculosis	O
CLOBH\|Gene_OrderedLocusName=CBO3231\|UniProtKB=A5I6W1	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0656\|UniProtKB=P63788	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_01536\|UniProtKB=Q2G2S1	Staphylococcus aureus	O
STAA8\|EnsemblGenome=SAOUHSC_00790\|UniProtKB=Q2G036	Staphylococcus aureus	O
LISMO\|Gene=clpP\|UniProtKB=Q8Y7Y1	Listeria monocytogenes	O
LISMO\|EnsemblGenome=CAD00546\|UniProtKB=Q9RQI6	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_34540\|UniProtKB=P80244	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_2793\|UniProtKB=Q81CH1	Bacillus cereus	O
BACCR\|EnsemblGenome=BC_5152\|UniProtKB=Q815J6	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_0695\|UniProtKB=Q9WZF9	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_1972\|UniProtKB=Q9RSZ7	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC91708\|UniProtKB=Q7NEW1	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA18567\|UniProtKB=P74466	Synechocystis	O
GLOVI\|EnsemblGenome=BAC91707\|UniProtKB=Q7NEW2	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA10867\|UniProtKB=Q59993	Synechocystis	O
SYNY3\|EnsemblGenome=BAA18568\|UniProtKB=P74467	Synechocystis	O
SYNY3\|EnsemblGenome=BAA10836\|UniProtKB=P54416	Synechocystis	O
LEPIN\|EnsemblGenome=LA_2559\|UniProtKB=Q8F352	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_3842\|UniProtKB=Q8A129	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_706\|UniProtKB=O84712	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB10826\|UniProtKB=Q7UK67	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB10829\|UniProtKB=Q7UK66	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_1339\|UniProtKB=O67357	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A0255\|UniProtKB=B5YI38	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1088\|UniProtKB=B8E290	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN2016\|UniProtKB=Q8RHJ8	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_0794\|UniProtKB=P56156	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB1312\|UniProtKB=Q9JZ38	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU1792\|UniProtKB=Q74C82	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC45876\|UniProtKB=Q89WR7	Bradyrhizobium diazoefficiens	O
BRADU\|EnsemblGenome=BAC50209\|UniProtKB=Q89KG1	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0738\|UniProtKB=Q83DJ2	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0714\|UniProtKB=P43867	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_2964\|UniProtKB=Q8ED07	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_1794\|UniProtKB=Q8EG19	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_1922\|UniProtKB=Q9KQS6	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0975\|UniProtKB=Q8PBY6	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA3326\|UniProtKB=Q9HYR9	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2189\|UniProtKB=Q9I1S6	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA1801\|UniProtKB=Q9I2U1	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM1033\|UniProtKB=Q8ZQ94	Salmonella typhimurium	O
SALTY\|EnsemblGenome=STM0912\|UniProtKB=Q8ZQG9	Salmonella typhimurium	O
SALTY\|EnsemblGenome=STM0448\|UniProtKB=P0A1D7	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_0774\|UniProtKB=Q8ZC65	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE76217\|UniProtKB=P0A6G7	Escherichia coli	O