PANTHER Gene Information

Gene Symbol(s):

SORBI_3008G032900

Organism:

Sorghum bicolor

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Gene Name:

U3 small nucleolar RNA-associated protein 25

Gene ID:

SORBI_3008G032900

Protein ID:

C5YRM8

Persistent Id:

PTN004394318

Alternate Ids:

C5YRM8_SORBI(UniProtKB-ID)	992160106(GI)
C5YRM8(Synonym)	SORBI_3008G032900(Ensembl)
CM000767(EMBL)	EES16625(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	ORF PROTEIN-RELATED (PTHR12933)
PANTHER Subfamily:	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 25 HOMOLOG (PTHR12933:SF0)
PANTHER GO-slim Molecular Function:	snoRNA binding rRNA binding
PANTHER GO-slim Biological Process:	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
PANTHER GO-slim Cellular Component:	nucleolus small-subunit processome
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	U3 snoRNA binding, rRNA binding
GO BP Complete:	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), embryo development ending in seed dormancy, rRNA transcription, rRNA processing, embryo sac development
GO CC Complete:	nucleus, small-subunit processome, nucleolus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=28440\|UniProtKB=Q68CQ4	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000001942.5\|UniProtKB=H2R3N9	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000006217.3\|UniProtKB=G3QTQ6	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000022066.4\|UniProtKB=F7HP44	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2138080\|UniProtKB=Q8BTT6	Mus musculus	LDO
RAT\|RGD=1359148\|UniProtKB=Q5M9G7	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000020886.6\|UniProtKB=A7YWC9	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000015611.4\|UniProtKB=F1SF51	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000022381.3\|UniProtKB=F7B8N7	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000015140.6\|UniProtKB=M3WM07	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845002933.1\|UniProtKB=A0A8I3MPH5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000002563.4\|UniProtKB=F7GFB0	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000008470.3\|UniProtKB=F7CDG1	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010018969.1\|UniProtKB=F1NHV1	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_6f17\|UniProtKB=Q5ZLG3	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000001292.4\|UniProtKB=G1K9D1	Anolis carolinensis	LDO
XENLA\|Gene=utp25.S\|UniProtKB=A1A5K4	Xenopus laevis	O
XENLA\|Gene=utp25.L\|UniProtKB=A2BDC8	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1002187\|UniProtKB=Q642T7	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000019107.2\|UniProtKB=H2MXY4	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-021217-2\|UniProtKB=Q6PEH4	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000017182.1\|UniProtKB=W5NKS8	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118407544\|UniProtKB=A0A9J7KKT0	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC586023\|UniProtKB=A0A7M7PS06	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00012756\|UniProtKB=Q9U2I4	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00034028\|UniProtKB=A8XHD4	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00105855\|UniProtKB=A0A8R1UCM2	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0034933\|UniProtKB=Q9W1G1	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP011170\|UniProtKB=A0A1S4H5Z1	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC008696\|UniProtKB=D6WSQ2	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_305636\|UniProtKB=E9FWX7	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW014267\|UniProtKB=B7QI03	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG102264\|UniProtKB=T1ED90	helobdella robusta	LDO
TRIAD\|EnsemblGenome=TriadG57324\|UniProtKB=B3RZ47	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_16374\|UniProtKB=A9UWJ7	Monosiga brevicollis	LDO
YEAST\|SGD=S000001353\|UniProtKB=P40498	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_ADL209C\|UniProtKB=Q75AX9	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000179907\|UniProtKB=Q59MU1	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_D03960g\|UniProtKB=Q6CAC9	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_01354\|UniProtKB=Q5BDM6	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_1G09320\|UniProtKB=Q4WTH1	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01022\|UniProtKB=Q9P749	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_10815\|UniProtKB=A7EZP8	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_04859\|UniProtKB=Q0UTQ5	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC1827.01c\|UniProtKB=O74974	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00945\|UniProtKB=B6JX19	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNG01210\|UniProtKB=Q5KEA3	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_00743\|UniProtKB=A0A0D1EAS0	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_05375\|UniProtKB=E3K6J0	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_1232\|UniProtKB=F4P4W5	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_177370\|UniProtKB=C4LY41	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0289235\|UniProtKB=Q54HT2	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_154864\|UniProtKB=F0ZSH0	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_14_0410\|UniProtKB=Q4QFU3	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.7.4340\|UniProtKB=Q57UR4	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_6211\|UniProtKB=A8BEK5	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_075430\|UniProtKB=A2FEF0	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1005100\|UniProtKB=Q8IJY7	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00016456001\|UniProtKB=A0DF13	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_36434\|UniProtKB=B8C934	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3H1H9_PHYRM\|UniProtKB=H3H1H9	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_04g218300v5\|UniProtKB=A0A2K3DU20	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00025p00182750\|UniProtKB=W1PWG6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_203G00190\|UniProtKB=A0A0K9PNU2	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma03_g13500\|UniProtKB=A0A804IBN4	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_029022mg\|UniProtKB=K3ZQZ2	Setaria italica	LDO
MAIZE\|EnsemblGenome=Zm00001eb406370\|UniProtKB=K7TM55	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os05g0295100\|UniProtKB=Q0DJF0	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_2g05445v3\|UniProtKB=A0A0Q3JX90	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0530580\|UniProtKB=A0A8I7BFV6	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G235900\|UniProtKB=A0A3B6TI29	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5B02G518200\|UniProtKB=A0A3B6LXG7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G017700\|UniProtKB=A0A3B6IMT3	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS5D02G517800\|UniProtKB=A0A3B6N1U6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G354200\|UniProtKB=A0A3B6HZ34	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_004351\|UniProtKB=A0A1U8A7G8	Nelumbo nucifera	LDO
NELNU\|Gene=LOC104595007\|UniProtKB=A0A1U7ZPP6	Nelumbo nucifera	O
SPIOL\|Gene=LOC110805919\|UniProtKB=A0A9R0JG54	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr03g0097531\|UniProtKB=A0A9K3JD08	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a004145mg\|UniProtKB=A0A022REW8	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc07g009350.3\|UniProtKB=A0A3Q7H8I8	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107815595\|UniProtKB=A0A1S4C6D8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107821000\|UniProtKB=A0A1S4CNQ0	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi11g01102\|UniProtKB=D7UBL1	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A01411\|UniProtKB=A0A059DET0	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra016592\|UniProtKB=M4DJB4	Brassica campestris	LDO
ARATH\|TAIR=locus=2007933\|UniProtKB=Q8H1E7	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107907358\|UniProtKB=A0A1U8JIU2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107907503\|UniProtKB=A0A1U8JQ03	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_039316\|UniProtKB=A0A061GRZ5	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g004428mg\|UniProtKB=A0A067H6E2	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_003G010000v3\|UniProtKB=U7E2I8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_17G002500\|UniProtKB=A0A2C9U3H9	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1194440\|UniProtKB=B9S320	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_15G163800\|UniProtKB=A0A0R0GBK3	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_09G057700\|UniProtKB=I1L1B7	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_8g466500\|UniProtKB=A0A072TR41	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_2g012650\|UniProtKB=G7ILH3	Medicago truncatula	LDO
MEDTR\|EnsemblGenome=MTR_8g466490\|UniProtKB=A0A072U1K7	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_2g036890\|UniProtKB=G7IN25	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr05_13670\|UniProtKB=A0A2I4G237	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr05_13660\|UniProtKB=A0A2I4G252	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G423320\|UniProtKB=A0A0A0LWW7	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G079600\|UniProtKB=A0A251QV40	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_446868\|UniProtKB=D8SV14	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_104941\|UniProtKB=D8RYU4	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c10_17670\|UniProtKB=A0A2K1JZG0	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0074s0025\|UniProtKB=A0A2R6WME8	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000440290\|UniProtKB=A0A1Y1HW08	Klebsormidium nitens	LDO