PANTHER Gene Information

Gene Symbol(s):

THAPSDRAFT_36597

Organism:

Thalassiosira pseudonana

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Gene Name:

TrmE-type G domain-containing protein

Gene ID:

THAPSDRAFT_36597

Protein ID:

B8CF78

Persistent Id:

PTN000909794

Alternate Ids:

XP_002296502(refSeq)	THAPSDRAFT_36597(Ensembl)
CM000653(EMBL)	220969240(GI)
B8CF78(Synonym)	EED87198(EMBL-CDS)
B8CF78_THAPS(UniProtKB-ID)	7443661(GeneID)
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PANTHER Classification

PANTHER Family:	TRNA MODIFICATION GTPASE GTPBP3 (PTHR42714)
PANTHER Subfamily:	TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL (PTHR42714:SF2)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	tRNA methylation tRNA wobble uridine modification
PANTHER GO-slim Cellular Component:	cytoplasm
PANTHER protein class:	RNA methyltransferase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	GTP binding, GTPase activity
GO BP Complete:	tRNA processing, tRNA wobble uridine modification, tRNA methylation, tRNA modification
GO CC Complete:	cytoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=14880\|UniProtKB=Q969Y2	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000010670.6\|UniProtKB=K7CHB2	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000015580.3\|UniProtKB=G3S773	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000023403.4\|UniProtKB=A0A1D5Q0C0	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1917609\|UniProtKB=Q923K4	Mus musculus	LDO
RAT\|RGD=1305367\|UniProtKB=Q5PQQ1	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000004200.5\|UniProtKB=E1BH64	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000038440.3\|UniProtKB=A0A286ZJG8	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000018651.4\|UniProtKB=F7BP68	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000001008.6\|UniProtKB=M3VVU3	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845027819.1\|UniProtKB=A0A8I3PV20	Canis lupus familiaris	LDO
ORNAN\|Ensembl=ENSOANG00000013734.3\|UniProtKB=F7FGZ6	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010028605.1\|UniProtKB=A0A8V1ALC1	Gallus gallus	LDO
XENLA\|Gene=gtpbp3.S\|UniProtKB=A0A8J0U2C2	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-988214\|UniProtKB=A0A8J0QZR5	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000008868.2\|UniProtKB=H2LYB0	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-050522-335\|UniProtKB=Q501Z5	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000003052.1\|UniProtKB=W5M5D7	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118403593\|UniProtKB=A0A9J7HEN3	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC576179\|UniProtKB=A0A7M7HLU5	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00009769\|UniProtKB=Q20446	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00038607\|UniProtKB=A8XVG8	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00118428\|UniProtKB=A0A2A6BWF9	Pristionchus pacificus	O
CAEEL\|WormBase=WBGene00009557\|UniProtKB=Q9XTZ1	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG19762\|UniProtKB=A8XWD5	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0039189\|UniProtKB=Q9VC87	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP002133\|UniProtKB=Q7PYV9	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC034529\|UniProtKB=A0A139WPQ8	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_300302\|UniProtKB=E9G4V7	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW015372\|UniProtKB=A0A1S4LKD5	Ixodes scapularis	LDO
TRIAD\|EnsemblGenome=TriadG53723\|UniProtKB=B3RPZ6	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_15612\|UniProtKB=A9UUI6	Monosiga brevicollis	LDO
YEAST\|SGD=S000004625\|UniProtKB=P32559	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_ABR063C\|UniProtKB=Q75DG3	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000188182\|UniProtKB=A0A1D8PG79	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_B18612g\|UniProtKB=Q6CE47	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_06522\|UniProtKB=Q5AYV8	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_6G04950\|UniProtKB=Q4WDJ3	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU04149\|UniProtKB=Q1K7K9	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_09015\|UniProtKB=A7EUK8	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_01177\|UniProtKB=Q0V487	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC222.05c\|UniProtKB=Q9UTE7	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02302\|UniProtKB=B6K238	Schizosaccharomyces japonicus	LDO
USTMA\|EnsemblGenome=UMAG_11313\|UniProtKB=A0A0D1E686	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_14281\|UniProtKB=E3KVA2	Puccinia graminis	LDO
DICDI\|dictyBase=DDB_G0270228\|UniProtKB=Q55C52	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_152248\|UniProtKB=F0ZKV3	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_25_0450\|UniProtKB=Q4QA50	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb11.03.0660\|UniProtKB=Q387K3	Trypanosoma brucei	LDO
PHYRM\|Gene=H3G805_PHYRM\|UniProtKB=H3G805	Phytophthora ramorum	LDO
CLOBH\|Gene_OrderedLocusName=CBO2418\|UniProtKB=A5I4J3	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO3584\|UniProtKB=A5I7V8	Clostridium botulinum	O
THEMA\|EnsemblGenome=TM_0445\|UniProtKB=Q9WYS6	Thermotoga maritima	O
SYNY3\|Gene=P74064_SYNY3\|UniProtKB=P74064	Synechocystis	O
SYNY3\|Gene=P72727_SYNY3\|UniProtKB=P72727	Synechocystis	O
SYNY3\|Gene=Q55485_SYNY3\|UniProtKB=Q55485	Synechocystis	O
BACTN\|EnsemblGenome=BT_1837\|UniProtKB=Q8A6P0	Bacteroides thetaiotaomicron	O
THEYD\|EnsemblGenome=THEYE_A1719\|UniProtKB=B5YH20	Thermodesulfovibrio yellowstonii	O
SHEON\|Gene_OrderedLocusName=SO_3926\|UniProtKB=Q8EAH6	Shewanella oneidensis	O
CHLAA\|EnsemblGenome=Caur_2820\|UniProtKB=A9WKE3	Chloroflexus aurantiacus	LDO
MYCGE\|EnsemblGenome=MG_008\|UniProtKB=P47254	mycoplasma genitalium	LDO
CLOBH\|Gene_OrderedLocusName=CBO2519\|UniProtKB=A5I4V0	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO3643\|UniProtKB=A5I816	Clostridium botulinum	LDO
STRR6\|EnsemblGenome=spr0920\|UniProtKB=Q8DPZ8	Streptococcus pneumoniae	LDO
STAA8\|EnsemblGenome=SAOUHSC_03053\|UniProtKB=Q2FUQ2	Staphylococcus aureus	LDO
LISMO\|EnsemblGenome=CAD01024\|UniProtKB=Q8Y3M4	Listeria monocytogenes	LDO
BACSU\|EnsemblGenome=BSU_41020\|UniProtKB=P25811	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_5486\|UniProtKB=Q814F6	Bacillus cereus	LDO
THEMA\|EnsemblGenome=TM_0267\|UniProtKB=Q9WYA4	Thermotoga maritima	LDO
DEIRA\|EnsemblGenome=DR_1016\|UniProtKB=Q9RVL1	Deinococcus radiodurans	LDO
GLOVI\|EnsemblGenome=BAC90393\|UniProtKB=Q7NHT3	Gloeobacter violaceus	LDO
SYNY3\|Gene=P74555_SYNY3\|UniProtKB=P74555	Synechocystis	O
SYNY3\|Gene=P74536_SYNY3\|UniProtKB=P74536	Synechocystis	O
SYNY3\|EnsemblGenome=BAA17896\|UniProtKB=P73839	Synechocystis	LDO
LEPIN\|EnsemblGenome=LA_0180\|UniProtKB=P97043	Leptospira interrogans	LDO
BACTN\|EnsemblGenome=BT_4551\|UniProtKB=Q89Z26	Bacteroides thetaiotaomicron	LDO
CHLTR\|EnsemblGenome=CT_698\|UniProtKB=O84704	Chlamydia trachomatis	LDO
RHOBA\|EnsemblGenome=RB6373\|UniProtKB=Q7UQE6	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB11877\|UniProtKB=Q7UJI3	Rhodopirellula baltica	LDO
AQUAE\|EnsemblGenome=aq_871\|UniProtKB=O67030	Aquifex aeolicus	LDO
THEYD\|EnsemblGenome=THEYE_A1223\|UniProtKB=B5YLC5	Thermodesulfovibrio yellowstonii	LDO
DICTD\|EnsemblGenome=Dtur_0117\|UniProtKB=B8DYR7	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN0006\|UniProtKB=Q8RHA2	Fusobacterium nucleatum	LDO
NEIMB\|EnsemblGenome=NMB1644\|UniProtKB=Q9JYD1	Neisseria meningitidis serogroup b	O
PSEAE\|EnsemblGenome=PA0344\|UniProtKB=Q9I6E9	Pseudomonas aeruginosa	O
HELPY\|EnsemblGenome=HP_1452\|UniProtKB=O25991	Helicobacter pylori	LDO
NEIMB\|EnsemblGenome=NMB1987\|UniProtKB=Q9JXL4	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU3465\|UniProtKB=Q746Q3	Geobacter sulfurreducens	LDO
COXBU\|EnsemblGenome=CBU_1922\|UniProtKB=P94612	Coxiella burnetii	LDO
HAEIN\|EnsemblGenome=HI_1002\|UniProtKB=P43730	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_0003\|UniProtKB=Q8CX52	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_0003\|UniProtKB=Q9KVY5	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC4238\|UniProtKB=Q8P340	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA5567\|UniProtKB=Q9HT07	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM3843\|UniProtKB=Q8ZKY3	Salmonella typhimurium	LDO
YERPE\|EnsemblGenome=YP_4010\|UniProtKB=Q8Z9U2	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE77587\|UniProtKB=P25522	Escherichia coli	LDO