PANTHER Gene Information

Gene Symbol(s):

rpl4

Organism:

Thalassiosira pseudonana

View Gene in Tree

Tree

Gene Name:

Large ribosomal subunit protein uL4c

Gene ID:

rpl4

Protein ID:

A0T0X3

Persistent Id:

PTN001644249

Alternate Ids:

ABK20808(EMBL-CDS)	EF067921(EMBL)
4524724(GeneID)	RK4_THAPS(UniProtKB-ID)
rpl4(Symbol)	50S ribosomal protein L4, chloroplastic(Synonym)
125987630(GI)	NC_008589(refSeq)
Show All

PANTHER Classification

PANTHER Family:	50S RIBOSOMAL PROTEIN L4 (PTHR10746)
PANTHER Subfamily:	LARGE RIBOSOMAL SUBUNIT PROTEIN UL4C (PTHR10746:SF17)
PANTHER GO-slim Molecular Function:	structural constituent of ribosome
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	structural constituent of ribosome, rRNA binding
GO BP Complete:	translation
GO CC Complete:	chloroplast, ribosome, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=14276\|UniProtKB=Q9BYD3	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000010462.6\|UniProtKB=A0A2I3TDT9	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000036529.1\|UniProtKB=A0A2I2ZXB9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000001219.4\|UniProtKB=A0A5F7ZRV7	Macaca mulatta	O
MOUSE\|MGI=MGI=2137210\|UniProtKB=Q9DCU6	Mus musculus	O
RAT\|RGD=1311777\|UniProtKB=D4A131	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000001419\|UniProtKB=Q32PI6	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000013656.5\|UniProtKB=A0A287B2W3	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000017013.4\|UniProtKB=F6WYA2	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000043071.2\|UniProtKB=A0A5F5XL71	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845028082.1\|UniProtKB=A0A8I3QHV4	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000005476.4\|UniProtKB=F7CG27	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000045427.1\|UniProtKB=A0A6I8N5N7	Ornithorhynchus anatinus	O
ANOCA\|Ensembl=ENSACAG00000008232.4\|UniProtKB=H9GDL9	Anolis carolinensis	O
XENLA\|Gene=mrpl4.L\|UniProtKB=A9JS31	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-1001754\|UniProtKB=A0A8J0SBD9	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000000085.2\|UniProtKB=H2L302	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-050522-388\|UniProtKB=Q503X2	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000016632.1\|UniProtKB=W5NIT6	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000003144.3\|UniProtKB=F6R725	Ciona intestinalis	O
BRAFL\|Gene=LOC118413293\|UniProtKB=A0A9J7KZB5	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC588169\|UniProtKB=A0A7M7PQ82	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00020717\|UniProtKB=O17005	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00024747\|UniProtKB=A8WQH6	Caenorhabditis briggsae	O
DROME\|FlyBase=FBgn0001995\|UniProtKB=Q9V3D0	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP007937\|UniProtKB=A0A1S4GWR2	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC011518\|UniProtKB=D6W6E1	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_52198\|UniProtKB=E9GLC0	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW020778\|UniProtKB=B7PXQ8	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW016414\|UniProtKB=B7P338	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG101733\|UniProtKB=T1ED65	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g238704\|UniProtKB=A7RJ96	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG27010\|UniProtKB=B3S0W8	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_6699\|UniProtKB=A9UV13	Monosiga brevicollis	O
YEAST\|SGD=S000004487\|UniProtKB=P51998	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER316C\|UniProtKB=Q756E9	Eremothecium gossypii	O
CANAL\|CGD=CAL0000188564\|UniProtKB=A0A1D8PQQ9	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_E20493g\|UniProtKB=Q6C573	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_06843\|UniProtKB=C8V2I4	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_5G12800\|UniProtKB=Q4WVP1	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU01474\|UniProtKB=V5IPE9	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_03249\|UniProtKB=A7ED59	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_16116\|UniProtKB=Q0TWI7	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBC2D10.08c\|UniProtKB=O74801	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_03649\|UniProtKB=B6K4T6	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNB02740\|UniProtKB=Q5KM69	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_00435\|UniProtKB=A0A0D1D0T3	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_01180\|UniProtKB=E3JUX4	Puccinia graminis	O
DICDI\|dictyBase=DDB_G0283275\|UniProtKB=Q54RB5	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_149944\|UniProtKB=F0ZF24	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_11_1360\|UniProtKB=Q4QGU6	Leishmania major	O
TRYB2\|Gene_ORFName=Tb11.02.3810\|UniProtKB=Q385G8	Trypanosoma brucei	O
CHLRE\|EnsemblGenome=CHLRE_11g479500v5\|UniProtKB=Q84U22	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00029p00221060\|UniProtKB=W1PIB5	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_239G00110\|UniProtKB=A0A0K9PJU0	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma08_g02150\|UniProtKB=A0A804K207	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_036750mg\|UniProtKB=K4ACZ1	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G427000\|UniProtKB=C5WQ51	Sorghum bicolor	LDO
ORYSJ\|EnsemblGenome=Os03g0265400\|UniProtKB=Q10NM5	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g67170v3\|UniProtKB=I1H755	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS4A02G091100\|UniProtKB=A0A3B6HT75	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS4D02G214300\|UniProtKB=A0A3B6JJY9	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G213600\|UniProtKB=A0A3B6ISI5	Triticum aestivum	LDO
NELNU\|Gene=LOC104596987\|UniProtKB=A0A1U8A4D8	Nelumbo nucifera	O
NELNU\|Gene=LOC104601218\|UniProtKB=A0A1U8ABP2	Nelumbo nucifera	LDO
SPIOL\|Gene_ORFName=SOVF_029280\|UniProtKB=O49937	Spinacia oleracea	O
SPIOL\|Gene=LOC110803006\|UniProtKB=A0A9R0JBJ2	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0016431\|UniProtKB=A0A251VNT7	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C500291530\|UniProtKB=A0A9R1VC60	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a009997mg\|UniProtKB=A0A022RE58	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_20497\|UniProtKB=A0A2G2Z545	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_20496\|UniProtKB=A0A2G2Z4T9	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400007051\|UniProtKB=M1AA49	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc07g061900.3\|UniProtKB=A0A3Q7HGB5	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107828567\|UniProtKB=A0A1S4DD77	Nicotiana tabacum	O
TOBAC\|Gene=LOC107817573\|UniProtKB=A0A1S4CCG1	Nicotiana tabacum	LDO
TOBAC\|Gene=RPL4\|UniProtKB=O80361	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi06g00598\|UniProtKB=F6GUU0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J01939\|UniProtKB=A0A059AGQ3	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C01P40880.1\|UniProtKB=A0A078JG33	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A07P00900.1\|UniProtKB=A0A078HBV9	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C05P05390.1\|UniProtKB=A0A078FDV7	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra015574\|UniProtKB=M4DGF0	Brassica campestris	LDO
ARATH\|TAIR=locus=2025107\|UniProtKB=O50061	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107931938\|UniProtKB=A0A1U8LXT6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107932518\|UniProtKB=A0A1U8LZP0	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_041662\|UniProtKB=A0A061GWI6	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g023032mg\|UniProtKB=A0A067FL24	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_006G221100v3\|UniProtKB=B9HD11	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_01G164100\|UniProtKB=A0A2C9WNZ6	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0611440\|UniProtKB=B9SHY1	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_03G110100\|UniProtKB=I1JMQ2	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_04G101800\|UniProtKB=K7KJA2	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_09G108400\|UniProtKB=K7LD43	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_07G114900\|UniProtKB=I1KJJ8	Glycine max	O
MEDTR\|EnsemblGenome=MTR_8g006995\|UniProtKB=A0A072TM19	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr05_07570\|UniProtKB=A0A2I4GGB4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G187950\|UniProtKB=A0A0A0KFB8	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G060600\|UniProtKB=M5WJ64	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_424334\|UniProtKB=D8SPJ7	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_57647\|UniProtKB=D8R4X0	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c24_10220\|UniProtKB=A0A7I4EQF3	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c23_4120\|UniProtKB=A0A2K1II13	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_21780\|UniProtKB=A0A2K1K8A5	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0001s0232\|UniProtKB=A0A1L7B569	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001600190\|UniProtKB=A0A1Y1I2W1	Klebsormidium nitens	LDO
CHLAA\|EnsemblGenome=Caur_2370\|UniProtKB=A9WH67	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4703\|UniProtKB=Q9L0D9	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv0702\|UniProtKB=P9WH85	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_152\|UniProtKB=P47398	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO3479\|UniProtKB=A5I7K5	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0189\|UniProtKB=Q8CWV7	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02511\|UniProtKB=Q2FW07	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00709\|UniProtKB=P61055	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01170\|UniProtKB=P42921	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0132\|UniProtKB=Q81J41	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1499\|UniProtKB=P38516	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_0312\|UniProtKB=Q9RXK1	Deinococcus radiodurans	O
LEPIN\|EnsemblGenome=LA_0740\|UniProtKB=Q9XD35	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_2726\|UniProtKB=Q8A477	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_527\|UniProtKB=O84532	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB7834\|UniProtKB=Q7UN19	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_011\|UniProtKB=O66432	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1445\|UniProtKB=B5YG46	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_0982\|UniProtKB=B8E1D4	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1644\|UniProtKB=Q8RIF6	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_1318\|UniProtKB=P56032	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB0143\|UniProtKB=P61057	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2856\|UniProtKB=P61063	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC50664\|UniProtKB=Q89J85	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0239\|UniProtKB=Q83ES3	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0778\|UniProtKB=P44345	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_0232\|UniProtKB=Q8EK67	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_2595\|UniProtKB=Q9KNY5	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0896\|UniProtKB=Q8PC48	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA4262\|UniProtKB=Q9HWD6	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM3439\|UniProtKB=P60726	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_0208\|UniProtKB=P60730	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE77972\|UniProtKB=P60723	Escherichia coli	O