PANTHER Gene Information

Gene Symbol(s):

TCM_000288

Organism:

Theobroma cacao

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Gene Name:

CDK5RAP1-like protein isoform 1

Gene ID:

TCM_000288

Protein ID:

A0A061DFI8

Persistent Id:

PTN005140726

Alternate Ids:

A0A061DFI8_THECC(UniProtKB-ID)	EOX90959(EMBL-CDS)
508699063(GI)	A0A061DFI8(Synonym)
CM001879(EMBL)	TCM_000288(Ensembl)
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PANTHER Classification

PANTHER Family:	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1 (PTHR43020)
PANTHER Subfamily:	MITOCHONDRIAL TRNA METHYLTHIOTRANSFERASE CDK5RAP1 (PTHR43020:SF2)
PANTHER GO-slim Molecular Function:	transferase activity, transferring sulphur-containing groups iron-sulfur cluster binding
PANTHER GO-slim Biological Process:	tRNA modification
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	methylthiotransferase activity, N6-isopentenyladenosine methylthiotransferase activity, metal ion binding, 4 iron, 4 sulfur cluster binding
GO BP Complete:	mitochondrial tRNA modification, tRNA modification, tRNA methylthiolation
GO CC Complete:	mitochondrion, cytosol

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=15880\|UniProtKB=Q96SZ6	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000013399.6\|UniProtKB=A0A2I3TEE9	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000003253.3\|UniProtKB=G3QL60	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000008470.4\|UniProtKB=H9FVP6	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1914221\|UniProtKB=Q8BTW8	Mus musculus	LDO
RAT\|RGD=708387\|UniProtKB=Q9JLH6	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000018535.6\|UniProtKB=A0A3Q1MHR5	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000007264.5\|UniProtKB=F1S500	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000020715.4\|UniProtKB=F6R033	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000015197.6\|UniProtKB=M3WM53	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845024161.1\|UniProtKB=A0A8I3PKX7	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000000175.4\|UniProtKB=F6TGF1	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000042488.1\|UniProtKB=A0A6I8N9B3	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010015094.1\|UniProtKB=A0A8V0YXT4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000004367.4\|UniProtKB=H9G933	Anolis carolinensis	LDO
XENLA\|Gene=cdk5rap1.L\|UniProtKB=A0A1L8ETP3	Xenopus laevis	LDO
XENTR\|Gene=cdk5rap1\|UniProtKB=A0A8J0SX79	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011531.2\|UniProtKB=H2M7J4	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-070424-90\|UniProtKB=A8WGJ0	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000001505.1\|UniProtKB=W5M033	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000020909.1\|UniProtKB=H2XKN0	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118423220\|UniProtKB=A0A9J7N2K7	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC577921\|UniProtKB=A0A7M7RG03	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00017776\|UniProtKB=Q09316	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG09036\|UniProtKB=A8X7Y9	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00278421\|UniProtKB=A0A2A6CR52	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0037816\|UniProtKB=Q9VGZ1	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP012104\|UniProtKB=A0A1S4H8C3	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC005903\|UniProtKB=D6WVN1	Tribolium castaneum	LDO
IXOSC\|EnsemblGenome=ISCW019931\|UniProtKB=B7PRQ9	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG161972\|UniProtKB=T1ES40	helobdella robusta	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_33699\|UniProtKB=A9V6X7	Monosiga brevicollis	LDO
DICDI\|dictyBase=DDB_G0287079\|UniProtKB=Q54KV4	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_36174\|UniProtKB=F0ZQK4	Dictyostelium purpureum	LDO
PARTE\|EnsemblGenome=GSPATT00013983001\|UniProtKB=A0D7J9	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_263872\|UniProtKB=B8CA19	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G704_PHYRM\|UniProtKB=H3G704	Phytophthora ramorum	LDO
AMBTC\|EnsemblGenome=AMTR_s00002p00236530\|UniProtKB=W1NZW5	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_91G00070\|UniProtKB=A0A0K9NJ04	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma07_g18520\|UniProtKB=A0A804JX61	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_026139mg\|UniProtKB=K3ZHT7	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3005G169900\|UniProtKB=A0A1Z5RJY4	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb114790\|UniProtKB=A0A1D6F795	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os11g0592800\|UniProtKB=Q2R1U4	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g14840v3\|UniProtKB=A0A2K2CMX1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0359890\|UniProtKB=F2CSK6	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G162900\|UniProtKB=A0A3B6ISD0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G158400\|UniProtKB=A0A3B6HSV3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4D02G153900\|UniProtKB=A0A3B6JJD2	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_015138\|UniProtKB=A0A1U7ZZK1	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110798904\|UniProtKB=A0A9R0K612	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0700061\|UniProtKB=A0A251SPA6	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300130730\|UniProtKB=A0A9R1WA92	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002810mg\|UniProtKB=A0A022QTC1	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_06396\|UniProtKB=A0A2G3AAT0	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400003535\|UniProtKB=M0ZVK8	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc02g084750.3\|UniProtKB=A0A3Q7F8C2	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107771927\|UniProtKB=A0A1S3Y3Y9	Nicotiana tabacum	O
TOBAC\|Gene=LOC107818346\|UniProtKB=A0A1S4CFD7	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi04g01384\|UniProtKB=F6GWS0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I02387\|UniProtKB=A0A059ARU1	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra011679\|UniProtKB=M4D5C2	Brassica campestris	LDO
ARATH\|TAIR=locus=2115410\|UniProtKB=Q8H0V1	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107914282\|UniProtKB=A0A1U8K821	Gossypium hirsutum	O
GOSHI\|Gene=LOC107897615\|UniProtKB=A0A1U8IRS0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107896695\|UniProtKB=A0A1U8INP2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107913041\|UniProtKB=A0A1U8K364	Gossypium hirsutum	LDO
CITSI\|Gene_ORFName=CISIN_1g041524mg\|UniProtKB=A0A067FUI9	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_007G018500v3\|UniProtKB=B9HFB0	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_01G140600\|UniProtKB=A0A2C9WKJ5	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0533210\|UniProtKB=B9S686	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_01G169900\|UniProtKB=K7K4A9	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_11G073400\|UniProtKB=K7LNH5	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g021230\|UniProtKB=G7KGB3	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr08_17850\|UniProtKB=A0A6P9ELA8	Juglans regia	O
JUGRE\|EnsemblGenome=Jr11_07310\|UniProtKB=A0A2I4ERM0	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G411190\|UniProtKB=A0A0A0KDY2	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G162800\|UniProtKB=M5WF79	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_180500\|UniProtKB=D8SKD9	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_235679\|UniProtKB=D8T0F4	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c3_14130\|UniProtKB=A0A2K1KUI2	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0050s0103\|UniProtKB=A0A2R6WXV0	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002350030\|UniProtKB=A0A1Y1I7M3	Klebsormidium nitens	LDO