PANTHER Gene Information

Gene Symbol(s):

TCM_031378

Organism:

Theobroma cacao

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Tree

Gene Name:

Ribosome biogenesis protein brix, putative

Gene ID:

TCM_031378

Protein ID:

A0A061F737

Persistent Id:

PTN004427697

Alternate Ids:

EOY12871(EMBL-CDS)	A0A061F737(Synonym)
TCM_031378(Ensembl)	CM001885(EMBL)
A0A061F737_THECC(UniProtKB-ID)	508720974(GI)
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PANTHER Classification

PANTHER Family:	RIBOSOME BIOGENESIS PROTEIN BRIX (PTHR13634)
PANTHER Subfamily:	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG (PTHR13634:SF0)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	ribosomal large subunit assembly
PANTHER GO-slim Cellular Component:	nucleolus
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, rRNA binding
GO BP Complete:	ribosome biogenesis, rRNA processing, ribosomal large subunit assembly
GO CC Complete:	nucleus, nucleolus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=24170\|UniProtKB=Q8TDN6	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000016784.5\|UniProtKB=K7BDK1	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000004225.3\|UniProtKB=G3QNM9	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000038794.2\|UniProtKB=F7A5Q1	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1915082\|UniProtKB=Q9DCA5	Mus musculus	LDO
RAT\|RGD=1308508\|UniProtKB=Q4QQT6	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000019211\|UniProtKB=Q3SZZ0	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000016827.5\|UniProtKB=F1SND4	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000000377.3\|UniProtKB=F7CY53	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000042465.2\|UniProtKB=A0A2I2UF52	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845000892.1\|UniProtKB=A0A8I3MXB4	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000020386.4\|UniProtKB=F7C078	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000014525.4\|UniProtKB=F6Y6C9	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010013256.1\|UniProtKB=F1NSS7	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000008586.4\|UniProtKB=H9GE57	Anolis carolinensis	LDO
XENLA\|Gene=brix1\|UniProtKB=Q8UVY2	Xenopus laevis	O
XENLA\|Gene=brix1.S\|UniProtKB=Q6GPU4	Xenopus laevis	O
XENLA\|Gene=brix1.L\|UniProtKB=A0A1L8I2K7	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1007993\|UniProtKB=B0BMM8	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000005895.2\|UniProtKB=H2LMZ1	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-060518-1\|UniProtKB=A0A0R4IBJ2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000011774.1\|UniProtKB=W5N1H5	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000001695.3\|UniProtKB=F6UJD6	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118431419\|UniProtKB=A0A9J7MC45	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC583114\|UniProtKB=A0A7M7T3P8	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00019678\|UniProtKB=P34524	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG22980\|UniProtKB=A8Y3I7	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00109364\|UniProtKB=A0A2A6BIY5	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0035524\|UniProtKB=Q9VZE6	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP005365\|UniProtKB=Q7Q7D7	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC011978\|UniProtKB=D6X2R7	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_309235\|UniProtKB=E9HB73	Daphnia pulex	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_318276\|UniProtKB=E9GIB8	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW015304\|UniProtKB=B7QMN0	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG190600\|UniProtKB=T1FS44	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g225272\|UniProtKB=A7TCJ8	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g23808\|UniProtKB=A7RXB6	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG60181\|UniProtKB=B3S7I8	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_36786\|UniProtKB=A9UXR5	Monosiga brevicollis	LDO
YEAST\|SGD=S000005437\|UniProtKB=Q08235	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AER020W\|UniProtKB=Q757J3	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000186593\|UniProtKB=A0A1D8PFE1	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_B11880g\|UniProtKB=Q6CEY4	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_10055\|UniProtKB=C8VTZ3	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_1G02210\|UniProtKB=Q4WKJ9	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01524\|UniProtKB=Q1K5J6	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_02099\|UniProtKB=A7E9W9	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_09233\|UniProtKB=Q0UG81	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC800.06\|UniProtKB=Q9HGL6	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02508\|UniProtKB=B6K2P2	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNE01670\|UniProtKB=Q5KH08	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_05180\|UniProtKB=A0A0D1CUK2	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_19928\|UniProtKB=E3LBH5	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_00742\|UniProtKB=E3JRR9	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_11789\|UniProtKB=F4P4H3	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_175090\|UniProtKB=C4LZN4	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0287937\|UniProtKB=Q54JN0	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_35229\|UniProtKB=F0ZP28	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_20_1670\|UniProtKB=Q4QCN5	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.61.1990\|UniProtKB=Q388D6	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_3589\|UniProtKB=A8BJN9	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_000420\|UniProtKB=A2EHR8	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_498400\|UniProtKB=A2E828	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0729400\|UniProtKB=Q8IBG5	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00023773001\|UniProtKB=A0E6X8	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00033549001\|UniProtKB=A0BYS9	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00003076001\|UniProtKB=A0DYJ1	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_33589\|UniProtKB=B8C0T2	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GSJ6_PHYRM\|UniProtKB=H3GSJ6	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_02g095400v5\|UniProtKB=A0A2K3E1Y3	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00022p00215770\|UniProtKB=W1PV32	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_205G00210\|UniProtKB=A0A0K9PNN7	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma02_g16770\|UniProtKB=A0A804I3L4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g30580\|UniProtKB=A0A804IVS7	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_017799mg\|UniProtKB=K3YU53	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G198500\|UniProtKB=C5XWF5	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb245760\|UniProtKB=B4FIT0	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb183430\|UniProtKB=B6TPS2	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os01g0148400\|UniProtKB=Q5ZEE1	Oryza sativa	O
WHEAT\|EnsemblGenome=TraesCS6B02G241800\|UniProtKB=A0A3B6PLM6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G274200\|UniProtKB=A0A077RF68	Triticum aestivum	O
ORYSJ\|EnsemblGenome=Os02g0591800\|UniProtKB=Q69L77	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g47400v3\|UniProtKB=I1IB32	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0196710\|UniProtKB=F2CT66	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2A02G452200\|UniProtKB=A0A3B6B521	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G473700\|UniProtKB=A0A3B6CCP0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G452000\|UniProtKB=W5BZB3	Triticum aestivum	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0589890\|UniProtKB=F2EB15	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6A02G204800\|UniProtKB=A0A3B6NQE6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G190000\|UniProtKB=A0A3B6QGN8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G225700\|UniProtKB=A0A3B6PN01	Triticum aestivum	LDO
NELNU\|Gene=LOC104604893\|UniProtKB=A0A1U8AKD0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110791486\|UniProtKB=A0A9R0IPL3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr12g0546991\|UniProtKB=A0A251T6F9	Helianthus annuus	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0452661\|UniProtKB=A0A251TNK7	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900479570\|UniProtKB=A0A9R1WUY5	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C700383610\|UniProtKB=A0A9R1UYF8	Lactuca sativa	LDO
CAPAN\|EnsemblGenome=T459_13618\|UniProtKB=A0A1U8GKR7	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400012714\|UniProtKB=M1AYM4	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc04g016380.3\|UniProtKB=A0A3Q7G163	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107814886\|UniProtKB=A0A1S4C485	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107827671\|UniProtKB=A0A1S4DAU9	Nicotiana tabacum	O
TOBAC\|Gene=LOC107814952\|UniProtKB=A0A1S4C448	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi07g00704\|UniProtKB=D7U390	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_F01099\|UniProtKB=A0A059BMI2	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00018136001\|UniProtKB=A0A078G9Z4	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A01P38760.1\|UniProtKB=A0A078G433	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra021111\|UniProtKB=M4DX65	Brassica campestris	LDO
ARATH\|TAIR=locus=2090131\|UniProtKB=Q9LE16	Arabidopsis thaliana	LDO
BRANA\|Gene_ORFName=GSBRNA2T00020113001\|UniProtKB=A0A078J385	Brassica napus	O
BRACM\|EnsemblGenome=Bra001595\|UniProtKB=A0A3P6A3T2	Brassica campestris	O
ARATH\|TAIR=locus=2011486\|UniProtKB=Q9C928	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107948635\|UniProtKB=A0A1U8NL24	Gossypium hirsutum	O
GOSHI\|Gene=LOC107886736\|UniProtKB=A0A1U8HJQ0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107929693\|UniProtKB=A0A1U8LTD4	Gossypium hirsutum	LDO
CITSI\|Gene_ORFName=CISIN_1g020495mg\|UniProtKB=A0A067G3B0	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_001G403100v3\|UniProtKB=B9N1J9	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_011G122200v3\|UniProtKB=B9HZX2	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_12G076100\|UniProtKB=A0A251JMJ1	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1362610\|UniProtKB=B9SUS1	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_18G278000\|UniProtKB=I1N4U6	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_02G114000\|UniProtKB=C6TA61	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_08G255000\|UniProtKB=I1KWN1	Glycine max	O
MEDTR\|EnsemblGenome=MTR_1g012990\|UniProtKB=A0A072VCY8	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_7g069430\|UniProtKB=G7KSA6	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr09_14360\|UniProtKB=A0A2I4EVF5	Juglans regia	O
JUGRE\|EnsemblGenome=Jr02_22340\|UniProtKB=A0A2I4H4J9	Juglans regia	LDO
PRUPE\|EnsemblGenome=PRUPE_4G185500\|UniProtKB=M5WHU2	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_66840\|UniProtKB=D8R2K0	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_46780\|UniProtKB=D8ST48	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c16_10600\|UniProtKB=A9SR48	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0044s0007\|UniProtKB=A0A2R6X089	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002370010\|UniProtKB=A0A1Y1I9S2	Klebsormidium nitens	LDO