PANTHER Gene Information

Gene Symbol(s):

TCM_031877

Organism:

Theobroma cacao

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Gene Name:

mRNA splicing factor, thioredoxin-like U5 snRNP

Gene ID:

TCM_031877

Protein ID:

A0A061F8G2

Persistent Id:

PTN004333954

Alternate Ids:

508721439(GI)	TCM_031877(Ensembl)
EOY13336(EMBL-CDS)	A0A061F8G2_THECC(UniProtKB-ID)
CM001885(EMBL)	A0A061F8G2(Synonym)
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PANTHER Classification

PANTHER Family:	THIOREDOXIN-LIKE PROTEN 4A, 4B (PTHR12052)
PANTHER Subfamily:	THIOREDOXIN-LIKE PROTEIN 4B (PTHR12052:SF4)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	U5 snRNP spliceosomal complex U4/U6 x U5 tri-snRNP complex
PANTHER protein class:	oxidoreductase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	RNA splicing, mRNA splice site recognition, mRNA processing, mRNA splicing, via spliceosome
GO CC Complete:	nucleus, U4/U6 x U5 tri-snRNP complex, U5 snRNP, spliceosomal complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=26041\|UniProtKB=Q9NX01	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000008337.4\|UniProtKB=H2QBH7	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000037830.1\|UniProtKB=A0A2I2Y9F3	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000049699.1\|UniProtKB=F6Z0Q0	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2443724\|UniProtKB=Q8BUH1	Mus musculus	LDO
RAT\|RGD=1305127\|UniProtKB=Q5FVI5	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000006353.3\|UniProtKB=Q5EA04	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005022235.1\|UniProtKB=A0A4X1SL33	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000021445.4\|UniProtKB=A0A9L0TJU2	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000005830.5\|UniProtKB=M3W4S4	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845008202.1\|UniProtKB=A0A8I3N410	Canis lupus familiaris	LDO
CANLF\|Ensembl=ENSCAFG00845015223.1\|UniProtKB=A0A8I3NW38	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000002503.2\|UniProtKB=F7B9Q6	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000039551.1\|UniProtKB=A0A6I8N4F8	Ornithorhynchus anatinus	LDO
XENLA\|Gene=txnl4b.S\|UniProtKB=Q5BIY3	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5780903\|UniProtKB=Q28GF9	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000004999.2\|UniProtKB=H2LJV6	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-051030-63\|UniProtKB=Q3B728	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000009526.1\|UniProtKB=W5MTD0	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118416432\|UniProtKB=A0A9J7L6U2	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC580248\|UniProtKB=A0A7M7MXN5	Strongylocentrotus purpuratus	LDO
IXOSC\|EnsemblGenome=ISCW017276\|UniProtKB=B7P8T6	Ixodes scapularis	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g189222\|UniProtKB=A7SFF2	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG49890\|UniProtKB=B3RP66	Trichoplax adhaerens	LDO
PHYRM\|Gene=H3G878_PHYRM\|UniProtKB=H3G878	Phytophthora ramorum	LDO
AMBTC\|EnsemblGenome=AMTR_s00019p00194970\|UniProtKB=W1PI11	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_125G00410\|UniProtKB=A0A0K9PZT5	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma09_g02080\|UniProtKB=A0A804KF00	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_027822mg\|UniProtKB=K3ZMK4	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3002G377900\|UniProtKB=C5X2G0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb327680\|UniProtKB=B6SMB5	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os11g0297900\|UniProtKB=Q53MQ0	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g20250v3\|UniProtKB=A0A0Q3EM86	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0341690\|UniProtKB=F2E5B1	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4D02G072700\|UniProtKB=A0A3B6JEI9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G074200\|UniProtKB=A0A3B6IPT1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G240800\|UniProtKB=A0A3B6HVR1	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_021652\|UniProtKB=A0A1U7Z0D5	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110806143\|UniProtKB=A0A9R0JIX3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0022651\|UniProtKB=A0A251VNB5	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C500294520\|UniProtKB=A0A9R1VCY8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a015627mg\|UniProtKB=A0A022S0P4	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_18445\|UniProtKB=A0A1U8H1Y8	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400020157\|UniProtKB=M1BSH6	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107786868\|UniProtKB=A0A1S3ZHX0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107787993\|UniProtKB=A0A1S3ZL85	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi07g00796\|UniProtKB=D7U3F2	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_H00809\|UniProtKB=A0A059AWF3	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00085279001\|UniProtKB=A0A078FPU5	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra013244\|UniProtKB=A0A398A3S4	Brassica campestris	LDO
ARATH\|TAIR=locus=2087273\|UniProtKB=Q6NMD4	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107916781\|UniProtKB=A0A1U8KGH8	Gossypium hirsutum	LDO
POPTR\|Gene_ORFName=POPTR_001G287600\|UniProtKB=A0A3N7EHK0	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_12G042200\|UniProtKB=A0A2C9UTG6	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1721340\|UniProtKB=B9S553	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_20G189700\|UniProtKB=I1NHQ1	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g080840\|UniProtKB=A0A072VY64	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr10_13130\|UniProtKB=A0A2I4ELP4	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr01_17910\|UniProtKB=A0A2I4GA21	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr10_13140\|UniProtKB=A0A2I4ELQ1	Juglans regia	O
JUGRE\|EnsemblGenome=Jr10_13150\|UniProtKB=A0A2I4ELP6	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr10_13160\|UniProtKB=A0A2I4ELP9	Juglans regia	LDO
PRUPE\|EnsemblGenome=PRUPE_2G099400\|UniProtKB=M5X0R7	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_87830\|UniProtKB=D8R7N2	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_139765\|UniProtKB=D8QMJ9	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c22_7790\|UniProtKB=A9RJ38	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0023s0044\|UniProtKB=A0A2R6XC90	Marchantia polymorpha	LDO