PANTHER Gene Information

Gene Symbol(s):

TCM_043324

Organism:

Theobroma cacao

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Gene Name:

RNA-binding family protein with retrovirus zinc finger-like domain isoform 1

Gene ID:

TCM_043324

Protein ID:

A0A061FPK3

Persistent Id:

PTN004472226

Alternate Ids:

CM001888(EMBL)	508726931(GI)
A0A061FPK3_THECC(UniProtKB-ID)	TCM_043324(Ensembl)
A0A061FPK3(Synonym)	EOY18828(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	SRA STEM-LOOP-INTERACTING RNA-BINDING PROTEIN, MITOCHONDRIAL (PTHR48031)
PANTHER Subfamily:	RNA-BINDING PROTEIN 4 (PTHR48031:SF2)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	zinc ion binding, RNA binding, mRNA binding
GO BP Complete:	-
GO CC Complete:	nucleus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
AMBTC\|EnsemblGenome=AMTR_s00002p00251200\|UniProtKB=W1P153	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_54G00670\|UniProtKB=A0A0K9NWK7	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g35090\|UniProtKB=A0A804IXD1	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma02_g14390\|UniProtKB=A0A804I2R5	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g28930\|UniProtKB=A0A804IV44	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_030621mg\|UniProtKB=K3ZVJ0	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G058700\|UniProtKB=C5XB79	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb116730\|UniProtKB=B6TRJ5	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb302210\|UniProtKB=B6U3A0	Zea mays	O
BRADI\|EnsemblGenome=BRADI_1g55020v3\|UniProtKB=I1H2Y5	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0146470\|UniProtKB=F2E6V0	Hordeum vulgare subsp. vulgare	O
SETIT\|EnsemblGenome=SETIT_036711mg\|UniProtKB=K4ACV4	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G136500\|UniProtKB=A0A1B6QIU5	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb217310\|UniProtKB=A0A1D6GKH5	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb053020\|UniProtKB=C0P2Q6	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0681900\|UniProtKB=Q7Y008	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g12460v3\|UniProtKB=I1GPK4	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0334460\|UniProtKB=A0A8I6X8X3	Hordeum vulgare subsp. vulgare	LDO
NELNU\|Gene=LOC104587359\|UniProtKB=A0A1U7Z6S3	Nelumbo nucifera	O
NELNU\|Gene=LOC104604541\|UniProtKB=A0A1U8AHT0	Nelumbo nucifera	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr14g0661791\|UniProtKB=A0A9K3ECK0	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr14g0456531\|UniProtKB=A0A251SLN0	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200091610\|UniProtKB=A0A9R1WC00	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a011311mg\|UniProtKB=A0A022RJE6	Erythranthe guttata	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400016922\|UniProtKB=M1BEW5	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g071560.3\|UniProtKB=A0A3Q7FJ81	Solanum lycopersicum	O
TOBAC\|Gene=LOC107769283\|UniProtKB=A0A1S3XVL1	Nicotiana tabacum	O
TOBAC\|Gene=LOC107825054\|UniProtKB=A0A1S4D220	Nicotiana tabacum	O
SOLLC\|EnsemblGenome=Solyc11g008210.2\|UniProtKB=A0A3Q7IQ95	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107777473\|UniProtKB=A0A1S3YL87	Nicotiana tabacum	O
TOBAC\|Gene=LOC107819783\|UniProtKB=A0A1S4CK83	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_08s0007g04870\|UniProtKB=F6HKC3	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi13g00684\|UniProtKB=F6HNC0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J01044\|UniProtKB=A0A059ACI0	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A03P01600.1\|UniProtKB=A0A078FGT1	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra005798\|UniProtKB=A0A3P5ZCY8	Brassica campestris	LDO
ARATH\|TAIR=locus=2036520\|UniProtKB=O22703	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2179939\|UniProtKB=Q8RWN5	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107915794\|UniProtKB=A0A1U8KDB5	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107939272\|UniProtKB=A0A1U8MRB3	Gossypium hirsutum	LDO
CITSI\|Gene_ORFName=CISIN_1g023559mg\|UniProtKB=A0A067EAL8	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_010G228700v3\|UniProtKB=B9HUL0	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_008G033000v3\|UniProtKB=B9HL79	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_10G051200\|UniProtKB=A0A2C9V3G1	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0253220\|UniProtKB=B9T555	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_10G276500\|UniProtKB=A0A0R0I6T9	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_20G113200\|UniProtKB=I1NFF9	Glycine max	LDO
JUGRE\|EnsemblGenome=Jr07_34150\|UniProtKB=A0A6P9EKY9	Juglans regia	O
JUGRE\|EnsemblGenome=Jr12_21740\|UniProtKB=A0A2I4DW75	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G118170\|UniProtKB=A0A0A0L709	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_2G324460\|UniProtKB=A0A0A0LQB5	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_5G622570\|UniProtKB=A0A0A0KUW9	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G206800\|UniProtKB=M5XLS7	Prunus persica	LDO