PANTHER Gene Information

Gene Symbol(s):

TCM_045527

Organism:

Theobroma cacao

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Tree

Gene Name:

Pseudouridine synthase family protein isoform 2

Gene ID:

TCM_045527

Protein ID:

A0A061FSQ0

Persistent Id:

PTN004236914

Alternate Ids:

A0A061FSQ0_THECC(UniProtKB-ID)	A0A061FSQ0(Synonym)
CM001888(EMBL)	TCM_045527(Ensembl)
508728234(GI)	EOY20131(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	PSEUDOURIDYLATE SYNTHASE (PTHR11142)
PANTHER Subfamily:	TRNA PSEUDOURIDINE(38_39) SYNTHASE (PTHR11142:SF5)
PANTHER GO-slim Molecular Function:	intramolecular transferase activity
PANTHER GO-slim Biological Process:	mRNA modification pseudouridine synthesis tRNA modification
PANTHER GO-slim Cellular Component:	nucleus cytoplasm
PANTHER protein class:	lyase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, pseudouridine synthase activity, isomerase activity, tRNA pseudouridine(38-40) synthase activity
GO BP Complete:	pseudouridine synthesis, tRNA pseudouridine synthesis, tRNA processing, mRNA pseudouridine synthesis
GO CC Complete:	nucleus, cytoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=25461\|UniProtKB=Q9BZE2	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000004449.4\|UniProtKB=H2Q528	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000015047.3\|UniProtKB=G3RGD8	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000041875.2\|UniProtKB=G7NCX7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1914299\|UniProtKB=Q9JI38	Mus musculus	LDO
RAT\|RGD=1310757\|UniProtKB=B0BN58	Rattus norvegicus	LDO
BOVIN\|Gene=PUS3\|UniProtKB=Q3SX07	Bos taurus	LDO
BOVIN\|Ensembl=ENSBTAG00000014339.3\|UniProtKB=F1N5P3	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005002131.1\|UniProtKB=F1S759	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000007581.4\|UniProtKB=F7BZ33	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000005340.6\|UniProtKB=M3W3W9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845010225.1\|UniProtKB=A0A8I3NGH2	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000004222.4\|UniProtKB=A0A5F8G1Y4	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000000406.3\|UniProtKB=K7EAA9	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010024652.1\|UniProtKB=A0A8V0ZYZ1	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000000186.4\|UniProtKB=H9G3C7	Anolis carolinensis	LDO
XENLA\|Gene=pus3.L\|UniProtKB=A0A8J0TR70	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5897110\|UniProtKB=Q6P815	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000008445.2\|UniProtKB=H2LWW2	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-9433\|UniProtKB=Q7ZW97	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000011922.1\|UniProtKB=W5N204	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000009062.3\|UniProtKB=F6R255	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118422252\|UniProtKB=A0A9J7LPM8	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC589993\|UniProtKB=A0A7M7NXH8	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00006473\|UniProtKB=Q09524	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00024264\|UniProtKB=A8WP84	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00108820\|UniProtKB=A0A2A6B6C3	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0034703\|UniProtKB=Q9W282	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP010807\|UniProtKB=A0A1S4H5V2	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC030541\|UniProtKB=D2A375	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_323292\|UniProtKB=E9GYG4	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW011539\|UniProtKB=B7Q752	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG99303\|UniProtKB=T1G9S1	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g245761\|UniProtKB=A7SJV8	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG26740\|UniProtKB=B3RZJ4	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_34507\|UniProtKB=A9VC57	Monosiga brevicollis	LDO
YEAST\|SGD=S000001895\|UniProtKB=P31115	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AGL003W\|UniProtKB=Q750F7	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000197135\|UniProtKB=Q59N30	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F18216g\|UniProtKB=Q6C194	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_03170\|UniProtKB=C8VIE4	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G13350\|UniProtKB=Q4WYK4	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01784\|UniProtKB=V5IR27	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_12226\|UniProtKB=A7F2S8	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_05510\|UniProtKB=Q0URV4	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC25B8.05\|UniProtKB=Q9UTB3	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02978\|UniProtKB=B6K2Z9	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNI00670\|UniProtKB=Q5KC13	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_10990\|UniProtKB=A0A0D1CL90	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_09575\|UniProtKB=E3KHT7	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_3084\|UniProtKB=F4P152	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_151650\|UniProtKB=C4LSK6	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0288909\|UniProtKB=Q54I97	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_154861\|UniProtKB=F0ZSG7	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_26_0420\|UniProtKB=Q4Q9E9	Leishmania major	O
TRYB2\|Gene_ORFName=Tb927.7.1510\|UniProtKB=Q57WP9	Trypanosoma brucei	O
LEIMA\|EnsemblGenome=LMJF_30_1550\|UniProtKB=Q4Q7E9	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.6.2970\|UniProtKB=Q583N7	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_15313\|UniProtKB=A8B801	Giardia intestinalis	O
GIAIC\|Gene_ORFName=GL50803_0089746\|UniProtKB=A0A644F508	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_206800\|UniProtKB=A2EY58	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0908700\|UniProtKB=Q8I0W4	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00002083001\|UniProtKB=A0DFY8	Paramecium tetraurelia	LDO
CHLRE\|EnsemblGenome=CHLRE_06g292450v5\|UniProtKB=A0A2K3DQD0	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_02g086050v5\|UniProtKB=A0A2K3E0W3	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00010p00250130\|UniProtKB=W1NGP2	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_313G00190\|UniProtKB=A0A0K9P9N1	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma02_g16670\|UniProtKB=A0A804I3K1	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_035527mg\|UniProtKB=K4A9H1	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G355200\|UniProtKB=C5WYL0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb018490\|UniProtKB=B4FYI2	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0381100\|UniProtKB=A0A0P0VYX7	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g61057v3\|UniProtKB=A0A0Q3HFJ0	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0233670\|UniProtKB=A0A287K8E8	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS3D02G091500\|UniProtKB=A0A3B6GR42	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G091600\|UniProtKB=A0A3B6EEZ9	Triticum aestivum	LDO
NELNU\|Gene=LOC104599992\|UniProtKB=A0A1U8AGI5	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110786903\|UniProtKB=A0A9R0JU67	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr04g0158391\|UniProtKB=A0A251UZQ3	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a017737mg\|UniProtKB=A0A022R8F7	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_12517\|UniProtKB=A0A2G2ZQ47	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400031154\|UniProtKB=M1D2V3	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107821638\|UniProtKB=A0A1S4CR27	Nicotiana tabacum	O
TOBAC\|Gene=LOC107793603\|UniProtKB=A0A1S4A480	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi18g02917\|UniProtKB=F6HJC9	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I00104\|UniProtKB=A0A059AL36	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_F00074\|UniProtKB=A0A059BKK9	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_J00222\|UniProtKB=A0A059A9V6	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_L00427\|UniProtKB=A0A058ZXI5	Eucalyptus grandis	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_F02671\|UniProtKB=A0A059BT35	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00085593001\|UniProtKB=A0A078FR23	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra028036\|UniProtKB=M4EGX1	Brassica campestris	LDO
ARATH\|TAIR=locus=2009021\|UniProtKB=Q9C5K6	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107944162\|UniProtKB=A0A1U8N6P6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107910479\|UniProtKB=A0A1U8JU69	Gossypium hirsutum	LDO
CITSI\|Gene_ORFName=CISIN_1g013738mg\|UniProtKB=A0A067GW60	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_005G199300v3\|UniProtKB=A0A2K2AJE0	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_002G061600v3\|UniProtKB=A0A2K2BEA6	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_02G186000\|UniProtKB=A0A2C9WF84	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0297060\|UniProtKB=B9SM90	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_20G171700\|UniProtKB=K7N408	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G220000\|UniProtKB=K7LKT0	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g097390\|UniProtKB=A0A072VZX5	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr06_01190\|UniProtKB=A0A2I4GW15	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G052720\|UniProtKB=A0A0A0KCJ1	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_8G045000\|UniProtKB=A0A251MT39	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_181988\|UniProtKB=D8SR09	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_105100\|UniProtKB=D8RZ63	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c9_3740\|UniProtKB=A0A2K1K1V9	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0139s0011\|UniProtKB=A0A2R6W6R8	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_005350040\|UniProtKB=A0A1Y1IJC7	Klebsormidium nitens	LDO
PYRAE\|EnsemblGenome=PAE1142\|UniProtKB=Q8ZXR6	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_0208\|UniProtKB=Q8TU65	Methanosarcina acetivorans	O
METJA\|EnsemblGenome=MJ_1675\|UniProtKB=Q59069	Methanocaldococcus jannaschii	O
HALSA\|EnsemblGenome=VNG_2003G\|UniProtKB=Q9HNP6	Halobacterium salinarum	O
THEKO\|EnsemblGenome=TK0927\|UniProtKB=Q5JI92	Thermococcus kodakaraensis	O
CHLAA\|EnsemblGenome=Caur_2398\|UniProtKB=A9WH95	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4731\|UniProtKB=O86776	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv3455c\|UniProtKB=P9WHP9	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_182\|UniProtKB=P47428	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO1914\|UniProtKB=A5I338	Clostridium botulinum	O
BACCR\|EnsemblGenome=BC_0471\|UniProtKB=Q813Z9	Bacillus cereus	O
CLOBH\|Gene_OrderedLocusName=CBO3447\|UniProtKB=A5I7H2	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr1451\|UniProtKB=Q8CWQ1	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02480\|UniProtKB=Q2FW37	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00676\|UniProtKB=Q8Y457	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01480\|UniProtKB=P70973	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0163\|UniProtKB=Q814C2	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1574\|UniProtKB=Q9X1R0	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_2290\|UniProtKB=Q9RS37	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC91510\|UniProtKB=Q7MBB9	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17323\|UniProtKB=P73295	Synechocystis	O
LEPIN\|EnsemblGenome=LA_2740\|UniProtKB=Q8CXS6	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_4237\|UniProtKB=Q89ZY4	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_463\|UniProtKB=O84469	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB2676\|UniProtKB=Q7TU07	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_749\|UniProtKB=O66953	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1546\|UniProtKB=B5YGE4	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1013\|UniProtKB=B8E1G5	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1600\|UniProtKB=Q8R601	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_0361\|UniProtKB=P56144	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB2036\|UniProtKB=Q9JXI2	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2877\|UniProtKB=P60350	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC53372\|UniProtKB=Q89BP1	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0892\|UniProtKB=Q4AAX9	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_1644\|UniProtKB=P45291	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_3068\|UniProtKB=K4PSU2	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0999\|UniProtKB=Q9KTA4	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC2546\|UniProtKB=Q8P7R5	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA3114\|UniProtKB=O87016	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2368\|UniProtKB=Q8ZNB9	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_2398\|UniProtKB=Q8ZD27	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAA16175\|UniProtKB=P07649	Escherichia coli	O