PANTHER Gene Information

Gene Symbol(s):

LOC107801239

Organism:

Nicotiana tabacum

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Tree

Gene Name:

Ribonucloprotein

Gene ID:

LOC107801239

Protein ID:

A0A1S4ATV0

Persistent Id:

PTN004606848

Alternate Ids:

107801239(GeneID)	A0A1S4ATV0_TOBAC(UniProtKB-ID)
A0A1S4ATV0(Synonym)	XM_016624525(refSeq)
1025212787(GI)
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PANTHER Classification

PANTHER Family:	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER (PTHR23105)
PANTHER Subfamily:	RIBONUCLOPROTEIN (PTHR23105:SF192)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	mRNA splicing, via spliceosome maturation of SSU-rRNA
PANTHER GO-slim Cellular Component:	precatalytic spliceosome U4/U6 x U5 tri-snRNP complex nucleolus small-subunit processome sno(s)RNA-containing ribonucleoprotein complex
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	maturation of SSU-rRNA, ribosome biogenesis, mRNA splicing, via spliceosome
GO CC Complete:	box C/D methylation guide snoRNP complex, nucleus, small-subunit processome, precatalytic spliceosome, U4/U6 x U5 tri-snRNP complex, nucleolus, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=7819\|UniProtKB=P55769	Homo sapiens	O
MACMU\|Ensembl=ENSMMUG00000042546.2\|UniProtKB=H9FUW8	Macaca mulatta	O
MOUSE\|MGI=MGI=893586\|UniProtKB=Q9D0T1	Mus musculus	O
RAT\|RGD=15003302\|UniProtKB=H7C5X3	Rattus norvegicus	O
RAT\|RGD=1303103\|UniProtKB=P55770	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000006104\|UniProtKB=Q3B8S0	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000036272.1\|UniProtKB=A0A287AJR4	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000000375.4\|UniProtKB=A0A9L0TEK0	Equus caballus	O
CANLF\|Ensembl=ENSCAFG00845030970.1\|UniProtKB=A0A8I3SCW1	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845016061.1\|UniProtKB=A0A8I3P795	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000016592.3\|UniProtKB=H9H704	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000011327.2\|UniProtKB=F7GEU7	Ornithorhynchus anatinus	O
XENLA\|Gene=snu13.L\|UniProtKB=Q7ZWY8	Xenopus laevis	O
XENLA\|Gene=snu13\|UniProtKB=Q5XH16	Xenopus laevis	O
XENTR\|Gene_ORFName=TGas123b15.1\|UniProtKB=Q6P8E9	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000022503.1\|UniProtKB=A0A3B3HVT1	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-040426-879\|UniProtKB=Q7ZU93	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-030131-9670\|UniProtKB=Q7ZV23	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000017988.1\|UniProtKB=W5NN80	lepisosteus oculatus	O
LEPOC\|Ensembl=ENSLOCG00000008147.1\|UniProtKB=W5MND4	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000021075.1\|UniProtKB=H2Y3L9	Ciona intestinalis	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_68109\|UniProtKB=C3Y952	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC115917922\|UniProtKB=A0A7M7RDJ2	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00010896\|UniProtKB=Q21568	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG03041\|UniProtKB=A8WSX8	Caenorhabditis briggsae	O
DROME\|FlyBase=FBgn0286786\|UniProtKB=Q9U3Z7	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP008163\|UniProtKB=A0A1S4GXG1	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC002918\|UniProtKB=D6WHE4	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_231249\|UniProtKB=E9GZH9	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW019216\|UniProtKB=B7PPV3	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG184927\|UniProtKB=T1FM61	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g170685\|UniProtKB=A7SHG4	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG51156\|UniProtKB=B3SCL5	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_33344\|UniProtKB=A9V4V6	Monosiga brevicollis	O
YEAST\|SGD=S000000752\|UniProtKB=P39990	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AEL070W\|UniProtKB=Q757T2	Eremothecium gossypii	O
CANAL\|CGD=CAL0000183109\|UniProtKB=Q5ANL6	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_F24497g\|UniProtKB=Q6C0I0	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_01319\|UniProtKB=Q5BDR1	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_2G05950\|UniProtKB=Q4WHB9	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU01331\|UniProtKB=Q1K7U2	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_10239\|UniProtKB=A7EY24	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_10693\|UniProtKB=Q0UC21	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC607.03c\|UniProtKB=O74690	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_03410\|UniProtKB=B6K457	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNG01500\|UniProtKB=P0CQ52	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_06360\|UniProtKB=Q4P0K3	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_02868\|UniProtKB=E3JWK2	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_90576\|UniProtKB=F4P827	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=EHI_053440\|UniProtKB=C4M8P0	Entamoeba histolytica	O
ENTH1\|EnsemblGenome=CL6EHI_104600\|UniProtKB=C4LZ69	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0282243\|UniProtKB=Q54ST0	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_150645\|UniProtKB=F0ZGV7	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_15_1470\|UniProtKB=Q4QF32	Leishmania major	O
TRYB2\|Gene_ORFName=Tb09.160.3670\|UniProtKB=Q38F38	Trypanosoma brucei	O
GIAIC\|EnsemblGenome=GL50803_2825\|UniProtKB=A8BJG3	Giardia intestinalis	O
GIAIC\|EnsemblGenome=GL50803_11287\|UniProtKB=A8BMJ0	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_282030\|UniProtKB=A2E9R8	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1123900\|UniProtKB=Q8IIC4	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00004508001\|UniProtKB=A0BCZ7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00019210001\|UniProtKB=A0DPR1	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00006003001\|UniProtKB=A0C033	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00010898001\|UniProtKB=A0CVB3	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_28570\|UniProtKB=B8C5H7	Thalassiosira pseudonana	O
PHYRM\|Gene=H3G9W2_PHYRM\|UniProtKB=H3G9W2	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_06g249250v5\|UniProtKB=A0A2K3DLU5	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00029p00103630\|UniProtKB=W1PP17	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00043p00189790\|UniProtKB=W1PRY3	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_6G00980\|UniProtKB=A0A0K9NT11	Zostera marina	O
MUSAM\|EnsemblGenome=Ma01_g20860\|UniProtKB=A0A804K312	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_038025mg\|UniProtKB=K4AGL8	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3001G440700\|UniProtKB=C5WRK2	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb399010\|UniProtKB=B6SIP0	Zea mays	O
SORBI\|EnsemblGenome=SORBI_3001G513500\|UniProtKB=C5WZ02	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb281950\|UniProtKB=A0A1D6LYA9	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb136210\|UniProtKB=A0A804N5C2	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb010300\|UniProtKB=B4FMS0	Zea mays	O
ORYSJ\|EnsemblGenome=Os10g0124000\|UniProtKB=Q7G608	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g21230v3\|UniProtKB=I1I302	Brachypodium distachyon	O
ORYSJ\|EnsemblGenome=Os03g0241200\|UniProtKB=Q10PA5	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g68505v3\|UniProtKB=I1H7K6	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0392970\|UniProtKB=F2CQ90	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS4A02G072500\|UniProtKB=W5EH10	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_028034\|UniProtKB=A0A1U7ZR80	Nelumbo nucifera	O
SPIOL\|Gene=LOC110795007\|UniProtKB=A0A0K9R241	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr09g0366991\|UniProtKB=A0A251TRP8	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr12g0523811\|UniProtKB=A0A251SZ85	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0462911\|UniProtKB=A0A251TQB9	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800413020\|UniProtKB=A0A9R1UVE6	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C500263730\|UniProtKB=A0A9R1VFD0	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a016259mg\|UniProtKB=A0A022QHN0	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a016257mg\|UniProtKB=A0A022QYN6	Erythranthe guttata	O
SOLTU\|EnsemblGenome=PGSC0003DMG400024264\|UniProtKB=M1C8X8	Solanum tuberosum	LDO
VITVI\|EnsemblGenome=Vitvi11g00452\|UniProtKB=F6HH82	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_C04195\|UniProtKB=A0A059CWT1	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_C01159\|UniProtKB=A0A059CMZ2	Eucalyptus grandis	O
BRANA\|EnsemblGenome=GSBRNA2T00131708001\|UniProtKB=A0A078H7X0	Brassica napus	O
BRACM\|EnsemblGenome=Bra006544\|UniProtKB=M4CQQ3	Brassica campestris	O
BRACM\|EnsemblGenome=Bra018487\|UniProtKB=M4DPP6	Brassica campestris	O
BRACM\|EnsemblGenome=Bra000781\|UniProtKB=A1YN00	Brassica campestris	O
BRACM\|EnsemblGenome=Bra029464\|UniProtKB=M4EKZ7	Brassica campestris	O
ARATH\|TAIR=locus=2149269\|UniProtKB=F4K455	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2135650\|UniProtKB=F4JRD3	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2127455\|UniProtKB=Q8LCC7	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107909217\|UniProtKB=A0A1U8JPH3	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_038062\|UniProtKB=A0A061GMC8	Theobroma cacao	O
POPTR\|EnsemblGenome=POPTR_015G123300v3\|UniProtKB=U5FR98	Populus trichocarpa	O
RICCO\|Gene_ORFName=RCOM_0871810\|UniProtKB=B9S6Q7	Ricinus communis	O
POPTR\|EnsemblGenome=POPTR_019G087100v3\|UniProtKB=A9P9K1	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_013G116800v3\|UniProtKB=A9PBI3	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_06G048900\|UniProtKB=A0A2C9VN05	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0222550\|UniProtKB=B9SEQ9	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_02G229800\|UniProtKB=C6SWR8	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_17G115400\|UniProtKB=I1MU97	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_13G167800\|UniProtKB=K7M084	Glycine max	O
MEDTR\|EnsemblGenome=MTR_4g114330\|UniProtKB=B7FKG0	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_0011s0330\|UniProtKB=I3SXG0	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr10_22020\|UniProtKB=A0A2I4GTJ7	Juglans regia	O
JUGRE\|EnsemblGenome=Jr01_29690\|UniProtKB=A0A6P9DYD5	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_2G006160\|UniProtKB=A0A0A0LF58	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_5G003200\|UniProtKB=M5VRH4	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_77105\|UniProtKB=D8QT37	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_83348\|UniProtKB=D8R2B5	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_159569\|UniProtKB=D8SZ02	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c14_21860\|UniProtKB=A9RXR1	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c17_18010\|UniProtKB=A9RTP6	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0003s0247\|UniProtKB=A0A2R6XTG3	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001470100\|UniProtKB=A0A1Y1HZ01	Klebsormidium nitens	O
NITMS\|EnsemblGenome=Nmar_0225\|UniProtKB=A9A2Z3	Nitrosopumilus maritimus	O
KORCO\|EnsemblGenome=Kcr_1017\|UniProtKB=B1L5N4	Korarchaeum cryptofilum	O
SACS2\|EnsemblGenome=SSO0091\|UniProtKB=P55858	Sulfolobus solfataricus	O
PYRAE\|EnsemblGenome=PAE3347\|UniProtKB=Q8ZTA5	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_1521\|UniProtKB=Q8TQL9	Methanosarcina acetivorans	O
METJA\|EnsemblGenome=MJ_1203\|UniProtKB=P54066	Methanocaldococcus jannaschii	O
THEKO\|EnsemblGenome=TK1311\|UniProtKB=Q5JGR3	Thermococcus kodakaraensis	O