PANTHER Gene Information

Gene Symbol(s):

VC_A0542

Organism:

Vibrio cholerae

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Gene Name:

Transcriptional regulator, LysR family

Gene ID:

VC_A0542

Protein ID:

Q9KM47

Persistent Id:

PTN002409719

Alternate Ids:

9657949(GI)	AAF96444(EMBL-CDS)
NP_232932(refSeq)	Q9KM47_VIBCH(UniProtKB-ID)
Q9KM47(Synonym)	69722275(GeneID)
VC_A0542(Ensembl)	AE003853(EMBL)
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PANTHER Classification

PANTHER Family:	HTH-TYPE TRANSCRIPTIONAL REGULATOR (PTHR30126)
PANTHER Subfamily:	LYSR FAMILY TRANSCRIPTIONAL REGULATOR (PTHR30126:SF94)
PANTHER GO-slim Molecular Function:	transcription cis-regulatory region binding
PANTHER GO-slim Biological Process:	regulation of DNA-templated transcription
PANTHER GO-slim Cellular Component:
PANTHER protein class:	helix-turn-helix transcription factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA-binding transcription factor activity, transcription cis-regulatory region binding
GO BP Complete:	regulation of DNA-templated transcription
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
DAPPU\|EnsemblGenome=DAPPUDRAFT_338001\|UniProtKB=E9I2E5	Daphnia pulex	O
METJA\|EnsemblGenome=MJ_1120\|UniProtKB=Q58520	Methanocaldococcus jannaschii	O
METJA\|EnsemblGenome=MJ_0300\|UniProtKB=Q57748	Methanocaldococcus jannaschii	O
CHLAA\|EnsemblGenome=Caur_3897\|UniProtKB=A9WDF5	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_3204\|UniProtKB=A9WIA6	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO0589\|UniProtKB=Q9RJQ1	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO3919\|UniProtKB=Q7AKL0	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO1616\|UniProtKB=O88073	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv0377\|UniProtKB=P9WMF7	Mycobacterium tuberculosis	O
MYCTU\|Gene_OrderedLocusName=Rv2282c\|UniProtKB=P9WMF3	Mycobacterium tuberculosis	O
CLOBH\|Gene_OrderedLocusName=CBO3592\|UniProtKB=A5I7W6	Clostridium botulinum	O
STAA8\|EnsemblGenome=SAOUHSC_00679\|UniProtKB=Q2G0C6	Staphylococcus aureus	O
LISMO\|Gene=Q8Y8A2_LISMO\|UniProtKB=Q8Y8A2	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_26870\|UniProtKB=O07906	Bacillus subtilis	O
BACSU\|EnsemblGenome=BSU_14140\|UniProtKB=O34827	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_3982\|UniProtKB=Q819J4	Bacillus cereus	O
LISMO\|Gene=Q8Y543_LISMO\|UniProtKB=Q8Y543	Listeria monocytogenes	O
LISMO\|Gene=Q8Y9N7_LISMO\|UniProtKB=Q8Y9N7	Listeria monocytogenes	O
LISMO\|Gene=Q8Y5B9_LISMO\|UniProtKB=Q8Y5B9	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_37650\|UniProtKB=P39647	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_1683\|UniProtKB=Q81FB1	Bacillus cereus	O
BACCR\|EnsemblGenome=BC_5175\|UniProtKB=Q815H7	Bacillus cereus	O
GLOVI\|Gene=Q7NE88_GLOVI\|UniProtKB=Q7NE88	Gloeobacter violaceus	O
GLOVI\|Gene=Q7NCX0_GLOVI\|UniProtKB=Q7NCX0	Gloeobacter violaceus	O
GLOVI\|Gene=Q7NKY6_GLOVI\|UniProtKB=Q7NKY6	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17149\|UniProtKB=P73123	Synechocystis	O
BACTN\|EnsemblGenome=BT_4599\|UniProtKB=Q89YY1	Bacteroides thetaiotaomicron	O
RHOBA\|EnsemblGenome=RB11328\|UniProtKB=Q7UEH5	Rhodopirellula baltica	O
GEOSL\|EnsemblGenome=GSU2941\|UniProtKB=Q748R0	Geobacter sulfurreducens	O
GEOSL\|EnsemblGenome=GSU2202\|UniProtKB=Q74AZ7	Geobacter sulfurreducens	O
GEOSL\|EnsemblGenome=GSU1268\|UniProtKB=Q74DP8	Geobacter sulfurreducens	O
GEOSL\|EnsemblGenome=GSU2523\|UniProtKB=Q74A67	Geobacter sulfurreducens	O
GEOSL\|EnsemblGenome=GSU2817\|UniProtKB=Q749C6	Geobacter sulfurreducens	O
SHEON\|Gene_OrderedLocusName=SO_1259\|UniProtKB=Q8EHG2	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_4571\|UniProtKB=Q8E8T6	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_2561\|UniProtKB=Q8EE29	Shewanella oneidensis	O
XANCP\|EnsemblGenome=XCC0236\|UniProtKB=Q8PDU9	Xanthomonas campestris	O
XANCP\|EnsemblGenome=XCC3391\|UniProtKB=Q8P5F0	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA1570\|UniProtKB=Q9I3E7	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA3398\|UniProtKB=Q9HYK6	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA1309\|UniProtKB=Q9I435	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA0816\|UniProtKB=Q9I5C3	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA5382\|UniProtKB=Q9HTI2	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2201\|UniProtKB=Q8ZNK8	Salmonella typhimurium	O
YERPE\|Gene_OrderedLocusName=YPO1934\|UniProtKB=Q9ZC44	Yersinia pestis	O
YERPE\|Gene_OrderedLocusName=YPO1308\|UniProtKB=A0A5P8YE07	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE76634\|UniProtKB=P0ACR4	Escherichia coli	O