PANTHER Gene Information

Gene Symbol(s):

trim13

Organism:

Xenopus tropicalis

View Gene in Tree


Tree	Reduced Tree

Gene Name:

Tripartite motif containing 13

Gene ID:

trim13

Protein ID:

F6ZQ54

Persistent Id:

PTN000647199

Alternate Ids:

trim13(Symbol)	1043434178(GI)
TRI13(Synonym)	TRI13_XENTR(UniProtKB-ID)
AAMC01049541(EMBL)
Show All

PANTHER Classification

PANTHER Family:	E3 UBIQUITIN-PROTEIN LIGASE TRIM (PTHR24103)
PANTHER Subfamily:	E3 UBIQUITIN-PROTEIN LIGASE TRIM13 (PTHR24103:SF609)
PANTHER GO-slim Molecular Function:	ubiquitin protein ligase activity
PANTHER GO-slim Biological Process:	ERAD pathway positive regulation of canonical NF-kappaB signal transduction positive regulation of NF-kappaB transcription factor activity protein ubiquitination positive regulation of macroautophagy innate immune response
PANTHER GO-slim Cellular Component:	cytoplasm
PANTHER protein class:	ubiquitin-protein ligase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	zinc ion binding, ubiquitin protein ligase activity, metal ion binding
GO BP Complete:	positive regulation of macroautophagy, innate immune response, positive regulation of canonical NF-kappaB signal transduction, ERAD pathway
GO CC Complete:	endoplasmic reticulum membrane, cytoplasm, membrane, endoplasmic reticulum

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=9976\|UniProtKB=O60858	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000031189.4\|UniProtKB=H2Q7K8	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000001619.3\|UniProtKB=G3QGX9	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000010898.4\|UniProtKB=F7FSH5	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1913847\|UniProtKB=Q9CYB0	Mus musculus	LDO
RAT\|RGD=1307609\|UniProtKB=Q5M7V1	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000008173\|UniProtKB=Q32L60	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005035172.1\|UniProtKB=F1RK25	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000047808.1\|UniProtKB=F6TCE1	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000028107.3\|UniProtKB=M3XEW9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845022686.1\|UniProtKB=A0A8I3PCN1	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000024106.2\|UniProtKB=F6WKK5	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000015539.3\|UniProtKB=A0A6I8PQF5	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010002812.1\|UniProtKB=A0A8V0XEF3	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000013825.1\|UniProtKB=G1KP74	Anolis carolinensis	LDO
XENLA\|Gene=trim13.L\|UniProtKB=A0A1L8HIQ6	Xenopus laevis	O
XENLA\|Gene=trim13.S\|UniProtKB=A0A8J0ULZ7	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000011855.2\|UniProtKB=H2M8N3	Oryzias latipes	LDO
LEPOC\|Ensembl=ENSLOCG00000009265.1\|UniProtKB=W5MSE1	lepisosteus oculatus	LDO
BRAFL\|Gene_ORFName=BRAFLDRAFT_107250\|UniProtKB=C3ZKR2	Branchiostoma floridae	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_118421\|UniProtKB=C3ZGA6	Branchiostoma floridae	O
BRAFL\|Gene=LOC118417355\|UniProtKB=A0A9J7MTS3	Branchiostoma floridae	O
BRAFL\|Gene=LOC118423726\|UniProtKB=A0A9J7LSV8	Branchiostoma floridae	O
BRAFL\|Gene=LOC118417354\|UniProtKB=A0A9J7MU30	Branchiostoma floridae	O
BRAFL\|Gene=LOC118429289\|UniProtKB=A0A9J7M7K9	Branchiostoma floridae	O
BRAFL\|Gene=LOC118426733\|UniProtKB=A0A9J7M0M9	Branchiostoma floridae	O
CAEEL\|WormBase=WBGene00021640\|UniProtKB=Q9N3T6	Caenorhabditis elegans	O
HELRO\|EnsemblGenome=HelroG193539\|UniProtKB=T1FV38	helobdella robusta	O
DICPU\|EnsemblGenome=DICPUDRAFT_96644\|UniProtKB=F0ZA65	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_36_1550\|UniProtKB=Q4Q1S1	Leishmania major	O
PARTE\|EnsemblGenome=GSPATT00006650001\|UniProtKB=A0C977	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00019138001\|UniProtKB=A0DPI9	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00002189001\|UniProtKB=A0DG93	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00005047001\|UniProtKB=A0BP31	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00004438001\|UniProtKB=A0BCS7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00027177001\|UniProtKB=A0EHR0	Paramecium tetraurelia	O