PANTHER Gene Information

Gene Symbol(s):

rbm5

Organism:

Xenopus tropicalis

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Gene Name:

RNA-binding protein 5

Gene ID:

XB-GENE-494987

Protein ID:

A4IGK4

Persistent Id:

PTN000359090

Alternate Ids:

BC135140(EMBL)	89267462(GI)
rbm5(Symbol)	CAJ81574(EMBL-CDS)
550032(GeneID)	RNA-binding motif protein 5(Synonym)
Q28D22(AltAccession)	RBM5_XENTR(UniProtKB-ID)
XM_012964790(refSeq)
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PANTHER Classification

PANTHER Family:	RNA-BINDING PROTEIN (PTHR13948)
PANTHER Subfamily:	RNA-BINDING PROTEIN 5 (PTHR13948:SF21)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, metal ion binding, mRNA binding
GO BP Complete:	RNA splicing, regulation of alternative mRNA splicing, via spliceosome, positive regulation of apoptotic process, mRNA processing, spliceosomal complex assembly, mRNA splicing, via spliceosome
GO CC Complete:	nucleus, spliceosomal complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=9902\|UniProtKB=P52756	Homo sapiens	LDO
GORGO\|Ensembl=ENSGGOG00000014490.3\|UniProtKB=G3REZ5	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000004921.4\|UniProtKB=I0FNA7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1933204\|UniProtKB=Q91YE7	Mus musculus	LDO
RAT\|RGD=1305059\|UniProtKB=B2GV05	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000006330\|UniProtKB=Q1RMU5	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000011395.5\|UniProtKB=A0A286ZJY1	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000020447.4\|UniProtKB=F6WC92	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000014639.6\|UniProtKB=M3WL23	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845023347.1\|UniProtKB=A0A8I3S3L0	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000012301.4\|UniProtKB=F7EJ76	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000006557.5\|UniProtKB=F6WGR0	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010027571.1\|UniProtKB=A0A1D5PQ66	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000008580.4\|UniProtKB=G1KI28	Anolis carolinensis	LDO
XENLA\|Gene=rbm5-b\|UniProtKB=Q6DDU9	Xenopus laevis	LDO
XENLA\|Gene=rbm5.L\|UniProtKB=A0A8J0UYP6	Xenopus laevis	O
XENLA\|Gene=rbm5-a\|UniProtKB=A0JMV4	Xenopus laevis	O
XENLA\|Gene=rbm5.S\|UniProtKB=A0A8J0V903	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000027833.1\|UniProtKB=A0A3B3HVY7	Oryzias latipes	O
DANRE\|Gene=LOC567058\|UniProtKB=A0A8M2BDH1	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000010900.1\|UniProtKB=W5MYA5	lepisosteus oculatus	O
ORYLA\|Ensembl=ENSORLG00000001053.2\|UniProtKB=H2L656	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000003369.2\|UniProtKB=H2LE20	Oryzias latipes	LDO
DANRE\|Gene=rbm5\|UniProtKB=A0A8M1NE58	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000010774.1\|UniProtKB=W5MXU3	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000002585.3\|UniProtKB=F6UEE4	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118416933\|UniProtKB=A0A9J7LA31	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC115919323\|UniProtKB=A0A7M7MYP9	Strongylocentrotus purpuratus	LDO
STRPU\|EnsemblGenome=LOC587083\|UniProtKB=A0A7M7T5Y5	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00020346\|UniProtKB=Q9BIC2	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG12565\|UniProtKB=A8XG21	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00104079\|UniProtKB=A0A2A6BLV0	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0031319\|UniProtKB=A0A023GRW3	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0031318\|UniProtKB=Q9VPY4	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP008577\|UniProtKB=A0A1S4GYN3	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC004717\|UniProtKB=D6W7A9	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_308724\|UniProtKB=E9H8Y7	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW017377\|UniProtKB=B7PD50	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG191574\|UniProtKB=T1FT34	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG87741\|UniProtKB=T1G6V1	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g238865\|UniProtKB=A7RK53	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG55476\|UniProtKB=B3RUZ9	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_26377\|UniProtKB=A9V270	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_23132\|UniProtKB=A9URA0	Monosiga brevicollis	LDO
EMENI\|EnsemblGenome=ANIA_04850\|UniProtKB=C8VA69	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G07480\|UniProtKB=Q4WWX9	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU03169\|UniProtKB=Q7SEW3	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_09311\|UniProtKB=A7EVF3	Sclerotinia sclerotiorum	LDO
SCHPO\|PomBase=SPAC57A7.13\|UniProtKB=P87143	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_01511\|UniProtKB=B6JY52	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNH02260\|UniProtKB=Q5KCU3	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_02655\|UniProtKB=A0A0D1DZ58	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_01801\|UniProtKB=E3JTD4	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_86774\|UniProtKB=F4NYL3	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0269006\|UniProtKB=Q55EN0	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_154195\|UniProtKB=F0ZQQ1	Dictyostelium purpureum	LDO
PARTE\|EnsemblGenome=GSPATT00017843001\|UniProtKB=A0DKE7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00022106001\|UniProtKB=A0E0X1	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_24452\|UniProtKB=B8CA61	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GMH6_PHYRM\|UniProtKB=H3GMH6	Phytophthora ramorum	LDO
AMBTC\|EnsemblGenome=AMTR_s00085p00040790\|UniProtKB=W1P3Y8	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_10G01370\|UniProtKB=A0A0K9Q3K7	Zostera marina	O
MUSAM\|EnsemblGenome=Ma02_g25010\|UniProtKB=A0A804I6N9	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_001520mg\|UniProtKB=K3XHZ8	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G052200\|UniProtKB=A0A1W0VVU4	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb122970\|UniProtKB=A0A1D6MKD2	Zea mays	O
BRADI\|EnsemblGenome=BRADI_2g04317v3\|UniProtKB=A0A2K2D6Y0	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0233760\|UniProtKB=M0XHL1	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3B02G107500\|UniProtKB=A0A3B6FGJ8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G092500\|UniProtKB=A0A3B6GRS3	Triticum aestivum	O
NELNU\|Gene=LOC104593125\|UniProtKB=A0A1U7ZSB3	Nelumbo nucifera	O
SPIOL\|Gene=LOC110799625\|UniProtKB=A0A9R0J4Z2	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr04g0148631\|UniProtKB=A0A251UX03	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100011440\|UniProtKB=A0A9R1XVG8	Lactuca sativa	O
CAPAN\|EnsemblGenome=T459_10140\|UniProtKB=A0A2G3A1D2	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400018175\|UniProtKB=M1BJN8	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g112510.2\|UniProtKB=A0A3Q7FQ75	Solanum lycopersicum	O
TOBAC\|Gene=LOC107829936\|UniProtKB=A0A1S4DHD8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107815216\|UniProtKB=A0A1S4C4Y3	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi17g00884\|UniProtKB=D7SHL9	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_K02814\|UniProtKB=A0A059A5Y5	Eucalyptus grandis	O
BRACM\|EnsemblGenome=Bra011494\|UniProtKB=M4D4T9	Brassica campestris	O
BRACM\|EnsemblGenome=Bra011498\|UniProtKB=M4D4U2	Brassica campestris	O
ARATH\|TAIR=locus=2124306\|UniProtKB=F4JKK8	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107887160\|UniProtKB=A0A1U8HL71	Gossypium hirsutum	O
GOSHI\|Gene=LOC107908424\|UniProtKB=A0A1U8JS14	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_012211\|UniProtKB=A0A061FVG7	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g011642mg\|UniProtKB=A0A067G1D6	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_002G197500v3\|UniProtKB=A0A2K2BLK4	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_14G062600\|UniProtKB=A0A2C9UJE0	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_1509480\|UniProtKB=B9RAX5	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_06G179300\|UniProtKB=A0A0R0JPJ8	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G186500\|UniProtKB=I1JXA4	Glycine max	O
JUGRE\|EnsemblGenome=Jr02_02880\|UniProtKB=A0A6P9EAT3	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_1G004190\|UniProtKB=A0A0A0LP33	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_5G169300\|UniProtKB=A0A251PB45	Prunus persica	O
PHYPA\|EnsemblGenome=Pp3c25_4990\|UniProtKB=A9U175	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0102s0046\|UniProtKB=A0A2R6WEA2	Marchantia polymorpha	O
AMBTC\|EnsemblGenome=AMTR_s00066p00089100\|UniProtKB=U5DHX8	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_75G00730\|UniProtKB=A0A0K9NPH5	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g08830\|UniProtKB=A0A804HRV7	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_016249mg\|UniProtKB=K3YPQ7	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3003G280800\|UniProtKB=A0A1B6Q5T5	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3002G124600\|UniProtKB=A0A1B6QAX1	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb361710\|UniProtKB=A0A1D6G3G4	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb306360\|UniProtKB=A0A1D6HYG7	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0167500\|UniProtKB=A0A0P0VFD5	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_2g43127v3\|UniProtKB=I1HPA1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0305490\|UniProtKB=A0A8I7B671	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS3D02G390300\|UniProtKB=A0A3B6GY58	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G396300\|UniProtKB=A0A3B6EPK9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G428300\|UniProtKB=W5D0Y2	Triticum aestivum	LDO
NELNU\|Gene=LOC104597458\|UniProtKB=A0A1U7ZUJ9	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110778991\|UniProtKB=A0A9R0JLK2	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0781461\|UniProtKB=A0A251RQE2	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300107760\|UniProtKB=A0A9R1XJS2	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000657mg\|UniProtKB=A0A022Q3R6	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_00761\|UniProtKB=A0A2G3AF65	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc08g077310.3\|UniProtKB=A0A3Q7HRI7	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107823696\|UniProtKB=A0A1S4CXX5	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107779923\|UniProtKB=A0A1S3YVC0	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_02s0012g00870\|UniProtKB=F6HTB7	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J01644\|UniProtKB=A0A059AEY8	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra007057\|UniProtKB=M4CS65	Brassica campestris	LDO
ARATH\|TAIR=locus=2080355\|UniProtKB=F4JCU0	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107916936\|UniProtKB=A0A1U8KM60	Gossypium hirsutum	O
GOSHI\|Gene=LOC107945247\|UniProtKB=A0A1U8N9U7	Gossypium hirsutum	O
GOSHI\|Gene=LOC107935609\|UniProtKB=A0A1U8MA78	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_017564\|UniProtKB=A0A061EDP8	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g043164mg\|UniProtKB=A0A067ETV5	Citrus sinensis	LDO
POPTR\|Gene_ORFName=POPTR_017G138500\|UniProtKB=A0A3N7G592	Populus trichocarpa	LDO
POPTR\|Gene_ORFName=POPTR_T116600\|UniProtKB=A0A3N7FGC9	Populus trichocarpa	O
POPTR\|Gene_ORFName=POPTR_004G081800\|UniProtKB=A0A3N7EWL8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_02G081900\|UniProtKB=A0A251LG50	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0286400\|UniProtKB=B9T403	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_08G266700\|UniProtKB=K7L940	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_16G102300\|UniProtKB=K7MGE9	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_8g070990\|UniProtKB=A0A072U387	Medicago truncatula	LDO
JUGRE\|Gene=LOC108983098\|UniProtKB=A0A6P9EPN6	Juglans regia	O
JUGRE\|EnsemblGenome=Jr01_09030\|UniProtKB=A0A2I4EBH8	Juglans regia	O
JUGRE\|EnsemblGenome=Jr01_09010\|UniProtKB=A0A2I4EBI0	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G319920\|UniProtKB=A0A0A0KR81	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G049800\|UniProtKB=A0A251QBB8	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_440257\|UniProtKB=D8RAJ6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_407112\|UniProtKB=D8R3Y4	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_423280\|UniProtKB=D8SL57	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_402018\|UniProtKB=D8QPB8	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c20_21810\|UniProtKB=A0A7I4C4S0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c10_21700\|UniProtKB=A0A2K1K008	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0005s0121\|UniProtKB=A0A2R6XQU6	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002870020\|UniProtKB=A0A1Y1IE88	Klebsormidium nitens	LDO