PANTHER Gene Information

Gene Symbol(s):

snrnp48

Organism:

Xenopus tropicalis

View Gene in Tree


Tree	Reduced Tree

Gene Name:

U11_U12 small nuclear ribonucleoprotein 48 kDa protein

Gene ID:

XB-GENE-5867840

Protein ID:

B4F6G8

Persistent Id:

PTN008576455

Alternate Ids:

B4F6G8_XENTR(UniProtKB-ID)	B4F6G8(Synonym)
195539784(GI)	NM_001142014(refSeq)
BC167869(EMBL)	AAI67869(EMBL-CDS)
100216024(GeneID)
Show All

PANTHER Classification

PANTHER Family:	GAMETOCYTE SPECIFIC FACTOR 1-RELATED (PTHR21402)
PANTHER Subfamily:	U11_U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN (PTHR21402:SF10)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	metal ion binding
GO BP Complete:	-
GO CC Complete:	U12-type spliceosomal complex, cytosol, ribonucleoprotein complex, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Processing of Capped Intron-Containing Pre-mRNA, mRNA Splicing, mRNA Splicing - Minor Pathway, Metabolism of RNA

Orthologs

ID	Organism	Type
HUMAN\|HGNC=21368\|UniProtKB=Q6IEG0	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000017703.6\|UniProtKB=K7B0S5	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000013220.3\|UniProtKB=G3RBN5	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000014785.4\|UniProtKB=F6WDE7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1915047\|UniProtKB=Q9D361	Mus musculus	LDO
RAT\|RGD=1309020\|UniProtKB=A0A8I6A3E2	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001123.5\|UniProtKB=E1B7L0	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000046358.2\|UniProtKB=F1RW74	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000026937.3\|UniProtKB=F6ZV57	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000018853.5\|UniProtKB=M3WPP6	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845017442.1\|UniProtKB=A0A8I3RZW1	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000009996.4\|UniProtKB=F6USA8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000046257.1\|UniProtKB=A0A6I8NW30	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010000787.1\|UniProtKB=A0A8V0X3T4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000002811.4\|UniProtKB=G1KB63	Anolis carolinensis	LDO
XENLA\|Gene=snrnp48.L\|UniProtKB=Q5XH46	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000015654.2\|UniProtKB=H2MLM2	Oryzias latipes	LDO
DANRE\|Gene=snrnp48\|UniProtKB=A0A8M9PCY3	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000004187.1\|UniProtKB=W5M9D6	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000004121.3\|UniProtKB=F6XUE2	Ciona intestinalis	LDO
TRICA\|EnsemblGenome=TC001134\|UniProtKB=D6WAB4	Tribolium castaneum	LDO
TRIAD\|EnsemblGenome=TriadG61126\|UniProtKB=B3SA41	Trichoplax adhaerens	LDO
AMBTC\|EnsemblGenome=AMTR_s00029p00178860\|UniProtKB=W1PHY2	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_288G00250\|UniProtKB=A0A0K9PF26	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma09_g01650\|UniProtKB=A0A804KEU2	Musa acuminata subsp. malaccensis	LDO
SORBI\|EnsemblGenome=SORBI_3001G035900\|UniProtKB=A0A1Z5S462	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb086400\|UniProtKB=B7ZWT4	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os04g0349401\|UniProtKB=A0A0N7KIW0	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_5g05921v3\|UniProtKB=I1IWQ6	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0160290\|UniProtKB=F2CTG1	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS2D02G275200\|UniProtKB=A0A2X0SPM3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G276200\|UniProtKB=A0A3B6AZ69	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G293900\|UniProtKB=A0A3B6C689	Triticum aestivum	LDO
NELNU\|Gene=LOC104590468\|UniProtKB=A0A1U7Z2S9	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110794715\|UniProtKB=A0A9R0K1V0	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0714381\|UniProtKB=A0A251SBI0	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900473180\|UniProtKB=A0A9R1UE33	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a022113mg\|UniProtKB=A0A022RKY0	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_30167\|UniProtKB=A0A2G2Y7P6	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400015112\|UniProtKB=M1B7R6	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc04g050760.3\|UniProtKB=A0A3Q7G1B0	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107811857\|UniProtKB=A0A1S4BTY6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107782741\|UniProtKB=A0A1S3Z3Z4	Nicotiana tabacum	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_H04160\|UniProtKB=A0A059B5H2	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00092892001\|UniProtKB=A0A078IIX6	Brassica napus	O
BRACM\|EnsemblGenome=Bra040209\|UniProtKB=M4FGI1	Brassica campestris	O
BRACM\|EnsemblGenome=Bra001096\|UniProtKB=M4CA67	Brassica campestris	LDO
ARATH\|TAIR=locus=2103030\|UniProtKB=Q9M8X2	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107893825\|UniProtKB=A0A1U8I847	Gossypium hirsutum	O
GOSHI\|Gene=LOC107920107\|UniProtKB=A0A1U8KRL9	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_026062\|UniProtKB=A0A061F1I4	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g0060532mg\|UniProtKB=A0A067DU50	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_019G029400v3\|UniProtKB=A0A2K1WNM0	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_09G145100\|UniProtKB=A0A251K7Y2	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1122770\|UniProtKB=B9SHL0	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_10G169000\|UniProtKB=K7LJW1	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g079470\|UniProtKB=G7I5N2	Medicago truncatula	LDO
JUGRE\|Gene=LOC108995773\|UniProtKB=A0A6P9E6Z9	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G662780\|UniProtKB=A0A0A0M085	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G355400\|UniProtKB=A0A251P0J7	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_423671\|UniProtKB=D8SMG7	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_406818\|UniProtKB=D8R313	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c17_4760\|UniProtKB=A9RSW0	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0001s0430\|UniProtKB=A0A2R6XWJ6	Marchantia polymorpha	LDO