PANTHER Gene Information

Gene Symbol(s):

ddx1

Organism:

Xenopus tropicalis

View Gene in Tree


Tree	Reduced Tree

Gene Name:

ATP-dependent RNA helicase DDX1

Gene ID:

XB-GENE-969096

Protein ID:

Q5XH91

Persistent Id:

PTN002773702

Alternate Ids:

DDX1_XENTR(UniProtKB-ID)	496549(GeneID)
CAJ81838(EMBL-CDS)	82233465(GI)
ddx1(Symbol)	CR855610(EMBL)
NP_001011133(refSeq)	DEAD box protein 1(Synonym)
3.6.4.13(EC)
Show All

PANTHER Classification

PANTHER Family:	ATP-DEPENDENT RNA HELICASE DBP3 (PTHR47958)
PANTHER Subfamily:	ATP-DEPENDENT RNA HELICASE (PTHR47958:SF190)
PANTHER GO-slim Molecular Function:	helicase activity mRNA binding catalytic activity, acting on RNA
PANTHER GO-slim Biological Process:	rRNA processing
PANTHER GO-slim Cellular Component:	nucleolus
PANTHER protein class:	RNA helicase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	ATP hydrolysis activity, poly(A) binding, helicase activity, chromatin binding, cohesin loader activity, nucleic acid binding, DNA binding, ATP binding, DNA clamp loader activity, ATP-dependent H2AZ histone chaperone activity, transcription coregulator activity, RNA binding, RNA helicase activity, exonuclease activity, nuclease activity, mRNA binding, ATP-dependent H3-H4 histone complex chaperone activity, chromatin extrusion motor activity, DNA/RNA helicase activity
GO BP Complete:	tRNA processing, DNA duplex unwinding, tRNA splicing, via endonucleolytic cleavage and ligation, rRNA processing, mRNA processing, double-strand break repair
GO CC Complete:	nucleus, cytoplasm, mitochondrion, cytosol, nucleolus, tRNA-splicing ligase complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BOVIN\|Ensembl=ENSBTAG00000009906\|UniProtKB=Q0IIK5	Bos taurus	LDO
CHICK\|Ensembl=ENSGALG00010003057.1\|UniProtKB=A0A8V0XI26	Gallus gallus	LDO
XENLA\|Gene=ddx1\|UniProtKB=A2VD92	Xenopus laevis	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_39079\|UniProtKB=A9VC27	Monosiga brevicollis	LDO
YEAST\|SGD=S000003046\|UniProtKB=P20447	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AFL080W\|UniProtKB=Q755A5	Eremothecium gossypii	O
CANAL\|CGD=CAL0000185988\|UniProtKB=Q5APT8	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_D09449g\|UniProtKB=Q6C9P3	Yarrowia lipolytica	O
EMENI\|Gene_ORFName=AN7424\|UniProtKB=Q5AWA6	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_2G06310\|UniProtKB=Q4WH83	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU05782\|UniProtKB=Q7S5R1	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_10526\|UniProtKB=A7EYW0	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_03302\|UniProtKB=Q0UY62	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBC17D1.06\|UniProtKB=Q10202	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_04081\|UniProtKB=B6K5V5	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNH02470\|UniProtKB=Q5KCW6	Cryptococcus neoformans	O
PUCGT\|EnsemblGenome=PGTG_14842\|UniProtKB=E3KWG2	Puccinia graminis	O
CRYNJ\|EnsemblGenome=CNE00590\|UniProtKB=P0CQ78	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_01732\|UniProtKB=Q4PDT1	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_00882\|UniProtKB=E3JU26	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_29496\|UniProtKB=F4NW72	Batrachochytrium dendrobatidis	O
LEIMA\|EnsemblGenome=LMJF_27_1300\|UniProtKB=E9ADB1	Leishmania major	O
TRYB2\|Gene_ORFName=Tb11.46.0009\|UniProtKB=Q386W1	Trypanosoma brucei	O
THAPS\|EnsemblGenome=THAPSDRAFT_32807\|UniProtKB=B8BYF1	Thalassiosira pseudonana	O
PHYRM\|Gene=H3G5S8_PHYRM\|UniProtKB=H3G5S8	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_12g539100v5\|UniProtKB=A0A2K3D5D3	Chlamydomonas reinhardtii	O
SETIT\|EnsemblGenome=SETIT_009816mg\|UniProtKB=K3Y6H5	Setaria italica	O
WHEAT\|EnsemblGenome=TraesCS4A02G184200\|UniProtKB=A0A3B6HTA6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G134500\|UniProtKB=A0A3B6IRZ9	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_030169\|UniProtKB=A0A1U8BLQ6	Nelumbo nucifera	O
BRANA\|Gene_ORFName=DARMORV10_C03P92620.1\|UniProtKB=A0A078F809	Brassica napus	O
JUGRE\|EnsemblGenome=Jr14_04400\|UniProtKB=A0A2I4HBJ2	Juglans regia	O
MARPO\|EnsemblGenome=MARPO_0120s0020\|UniProtKB=A0A2R6WA84	Marchantia polymorpha	O
AMBTC\|EnsemblGenome=AMTR_s00048p00130950\|UniProtKB=U5D2E5	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_495G00050\|UniProtKB=A0A0K9P1G0	Zostera marina	O
MUSAM\|EnsemblGenome=Ma11_g05950\|UniProtKB=A0A804L4P8	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_029524mg\|UniProtKB=K3ZSE4	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G112100\|UniProtKB=C5X497	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb305590\|UniProtKB=C0PDP9	Zea mays	O
ORYSJ\|EnsemblGenome=Os07g0301200\|UniProtKB=Q6YS30	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g52650v3\|UniProtKB=I1H278	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0455740\|UniProtKB=A0A8I7BE25	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS5B02G120500\|UniProtKB=A0A3B6LIR9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G125100\|UniProtKB=A0A3B6MNB0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G114400\|UniProtKB=A0A3B6KDI9	Triticum aestivum	O
NELNU\|Gene=LOC104600395\|UniProtKB=A0A1U8AGS9	Nelumbo nucifera	O
SPIOL\|Gene=LOC110791175\|UniProtKB=A0A9R0JYV5	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0784511\|UniProtKB=A0A251RLA2	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100005780\|UniProtKB=A0A9R1XUV2	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a006477mg\|UniProtKB=A0A022QRF5	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_00961\|UniProtKB=A0A2G3AFR9	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400009295\|UniProtKB=M1AJB8	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc08g076200.3\|UniProtKB=A0A3Q7IMJ4	Solanum lycopersicum	O
TOBAC\|Gene=LOC107794787\|UniProtKB=A0A1S4A835	Nicotiana tabacum	O
TOBAC\|Gene=LOC107789804\|UniProtKB=A0A1S3ZS83	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi02g00954\|UniProtKB=D7SYM6	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_D02628\|UniProtKB=A0A059CK13	Eucalyptus grandis	O
BRANA\|Gene_ORFName=GSBRNA2T00073611001\|UniProtKB=A0A078HV89	Brassica napus	O
BRACM\|EnsemblGenome=Bra035518\|UniProtKB=M4F368	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_A09P34220.1\|UniProtKB=A0A078JGP3	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C05P31310.1\|UniProtKB=A0A078JK79	Brassica napus	O
BRACM\|EnsemblGenome=Bra023227\|UniProtKB=M4E376	Brassica campestris	O
ARATH\|TAIR=locus=2034481\|UniProtKB=Q9C551	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107941389\|UniProtKB=A0A1U8MXX8	Gossypium hirsutum	O
GOSHI\|Gene=LOC107938593\|UniProtKB=A0A1U8MNW4	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_016633\|UniProtKB=A0A061GE08	Theobroma cacao	O
POPTR\|EnsemblGenome=POPTR_003G098800v3\|UniProtKB=A0A2K2B4J7	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_17G010800\|UniProtKB=A0A2C9U4P0	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_1316940\|UniProtKB=B9RZ31	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_09G210700\|UniProtKB=I1L537	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_01G010400\|UniProtKB=I1J4L9	Glycine max	O
MEDTR\|EnsemblGenome=MTR_5g027840\|UniProtKB=G7K9I9	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr02_13820\|UniProtKB=A0A2I4GJ29	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_3G639040\|UniProtKB=A0A0A0LBU0	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_5G024900\|UniProtKB=M5WWB4	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_232454\|UniProtKB=D8RVC4	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_232961\|UniProtKB=D8S224	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c21_4750\|UniProtKB=A0A2K1IQS2	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0045s0142\|UniProtKB=A0A2R6X076	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001220030\|UniProtKB=A0A1Y1HVT1	Klebsormidium nitens	O
NITMS\|EnsemblGenome=Nmar_1182\|UniProtKB=A9A5S3	Nitrosopumilus maritimus	O
SACS2\|EnsemblGenome=SSO2036\|UniProtKB=Q97WT0	Sulfolobus solfataricus	O
SACS2\|EnsemblGenome=SSO1889\|UniProtKB=Q97X64	Sulfolobus solfataricus	O