PANTHER Gene Information

Gene Symbol(s):

cstf1

Organism:

Xenopus tropicalis

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Gene Name:

Cleavage stimulation factor 50 kDa subunit

Gene ID:

XB-GENE-970048

Protein ID:

Q6NVS0

Persistent Id:

PTN009174556

Alternate Ids:

Q6NVS0(Synonym)	KV460429(EMBL)
ENSXETP00000110643(Ensembl_PRO)	ENSXETT00000105892(Ensembl_TRS)
Q6NVS0_XENTR(UniProtKB-ID)	407896(GeneID)
82237245(GI)	NM_001001220(refSeq)
OCA18245(EMBL-CDS)	ENSXETG00000012030(Ensembl)
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PANTHER Classification

PANTHER Family:	CLEAVAGE STIMULATION FACTOR SUBUNIT 1 (PTHR44133)
PANTHER Subfamily:	CLEAVAGE STIMULATION FACTOR SUBUNIT 1 (PTHR44133:SF2)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	mRNA cleavage factor complex
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	mRNA 3'-end processing
GO CC Complete:	nucleus, mRNA cleavage stimulating factor complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=2483\|UniProtKB=Q05048	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000013647.3\|UniProtKB=G2HEA5	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000007205.3\|UniProtKB=G3QW97	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000000072.4\|UniProtKB=G7N4H3	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1914587\|UniProtKB=Q99LC2	Mus musculus	LDO
RAT\|RGD=1309267\|UniProtKB=Q5BJQ6	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000006639.6\|UniProtKB=A0JN63	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005001019.1\|UniProtKB=A5GFW3	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000008949.4\|UniProtKB=F6S5J7	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000025673.4\|UniProtKB=M3X8P0	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845029253.1\|UniProtKB=A0A8I3Q2Q2	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000016436.3\|UniProtKB=F7ARW5	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000037738.1\|UniProtKB=A0A6I8P949	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010013220.1\|UniProtKB=E1C3Q4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000015997.4\|UniProtKB=H9GMV4	Anolis carolinensis	LDO
XENLA\|Gene=cstf1.S\|UniProtKB=Q7ZYG2	Xenopus laevis	O
XENLA\|Gene=cstf1.L\|UniProtKB=Q6DFC3	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000009422.3\|UniProtKB=H2M085	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-2958\|UniProtKB=F1QFK9	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000003418.1\|UniProtKB=W5M6N5	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000003910.3\|UniProtKB=F6SML9	Ciona intestinalis	LDO
BRAFL\|Gene_ORFName=BRAFLDRAFT_131394\|UniProtKB=C3ZY33	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC582854\|UniProtKB=A0A7M7NXV4	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00000773\|UniProtKB=Q19864	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG00548\|UniProtKB=A8WNM2	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00274723\|UniProtKB=A0A8R1UQ40	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0039867\|UniProtKB=Q9V9V0	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP002776\|UniProtKB=Q7QCR7	Anopheles gambiae	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_300374\|UniProtKB=E9G5N6	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG80748\|UniProtKB=T1G449	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g174858\|UniProtKB=A7SVS3	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG26681\|UniProtKB=B3RZT4	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_34204\|UniProtKB=A9VA75	Monosiga brevicollis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_88661\|UniProtKB=F4P2W0	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0278769\|UniProtKB=Q54XS9	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_89999\|UniProtKB=F0ZZM4	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_33_0280\|UniProtKB=Q4Q4J2	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.61.0570\|UniProtKB=Q387U0	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_15042\|UniProtKB=A8BFV5	Giardia intestinalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0620500\|UniProtKB=C6KT45	Plasmodium falciparum	LDO
AMBTC\|EnsemblGenome=AMTR_s00047p00220400\|UniProtKB=U5D614	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_1G03780\|UniProtKB=A0A0K9PQ69	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma06_g36900\|UniProtKB=A0A804JPL0	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_038787mg\|UniProtKB=K4AIS5	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G085800\|UniProtKB=Q8LKU8	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb057630\|UniProtKB=B4FBI9	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0754900\|UniProtKB=Q9FNU4	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g08294v3\|UniProtKB=I1GN67	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0511430\|UniProtKB=Q9ARL8	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS5B02G397200\|UniProtKB=A0A3B6LS37	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G402200\|UniProtKB=A0A3B6MWQ4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G392400\|UniProtKB=A0A3B6KQ94	Triticum aestivum	LDO
NELNU\|Gene=LOC104597906\|UniProtKB=A0A1U8A7S2	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110795610\|UniProtKB=A0A9R0IWA4	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0232341\|UniProtKB=A0A251UUP1	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C500237390\|UniProtKB=A0A9R1VM63	Lactuca sativa	LDO
SOLLC\|EnsemblGenome=Solyc12g038540.2\|UniProtKB=A0A3Q7J7Q7	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107779660\|UniProtKB=A0A1S3YTY3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107774759\|UniProtKB=A0A1S3YD10	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_17s0000g05080\|UniProtKB=D7SIL8	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_K02539\|UniProtKB=A0A059A6H9	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C07P44720.1\|UniProtKB=A0A078J444	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra012994\|UniProtKB=M4D934	Brassica campestris	LDO
ARATH\|TAIR=locus=2173542\|UniProtKB=Q8L4J2	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107953492\|UniProtKB=A0A1U8NZA9	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_014303\|UniProtKB=A0A061FX69	Theobroma cacao	LDO
MANES\|EnsemblGenome=MANES_14G087700\|UniProtKB=A0A2C9UL23	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1468950\|UniProtKB=B9RLL1	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_04G160300\|UniProtKB=A0A0R0KK04	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_06G205000\|UniProtKB=I1KD31	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_2g060520\|UniProtKB=G7IGS9	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr09_01160\|UniProtKB=A0A2I4F9A5	Juglans regia	O
JUGRE\|EnsemblGenome=Jr09_01150\|UniProtKB=A0A2I4F9A0	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G039850\|UniProtKB=A0A0A0LVN0	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G207700\|UniProtKB=A0A251PBH1	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_141637\|UniProtKB=D8QXZ6	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c18_4200\|UniProtKB=A9RMF9	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0118s0024\|UniProtKB=A0A2R6WAK7	Marchantia polymorpha	LDO