PANTHER Gene Information

Gene Symbol(s):

AMTR_s00049p00200350

Organism:

Amborella trichopoda

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Gene Name:

RRM domain-containing protein

Gene ID:

AMTR_s00049p00200350

Protein ID:

W1PUU2

Persistent Id:

PTN004472533

Alternate Ids:

18442029(GeneID)	KI392567(EMBL)
548855919(GI)	XP_006852315(refSeq)
AMTR_s00049p00200350(Ensembl)	W1PUU2_AMBTC(UniProtKB-ID)
ERN13782(EMBL-CDS)	W1PUU2(Synonym)
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PANTHER Classification

PANTHER Family:	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN (PTHR48033)
PANTHER Subfamily:	RRM DOMAIN-CONTAINING PROTEIN (PTHR48033:SF5)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	regulation of gene expression
PANTHER GO-slim Cellular Component:	chromatin nucleoplasm
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	pre-mRNA intronic binding, RNA binding, mRNA binding, mRNA 3'-UTR binding
GO BP Complete:	positive regulation of short-day photoperiodism, flowering, regulation of gene expression, positive regulation of long-day photoperiodism, flowering
GO CC Complete:	chromatin, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=11571\|UniProtKB=Q13148	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000048576.1\|UniProtKB=H2PY00	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000042352.1\|UniProtKB=A0A2I2YWU7	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000015357.3\|UniProtKB=G3RH63	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000007456.4\|UniProtKB=H9EMX3	Macaca mulatta	O
MOUSE\|MGI=MGI=2387629\|UniProtKB=Q921F2	Mus musculus	O
RAT\|RGD=1310906\|UniProtKB=A0A8I6GLU8	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000003697.6\|UniProtKB=G3MX91	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000023126.4\|UniProtKB=A0A8D0UXS6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000008338.3\|UniProtKB=F6WAU6	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000000050.5\|UniProtKB=A0A2I2U8C8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845007703.1\|UniProtKB=A0A8I3N4T6	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845003100.1\|UniProtKB=A0A8I3MQ17	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000011233.4\|UniProtKB=A0A5F8GU32	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000013320.3\|UniProtKB=F7EDX1	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010021644.1\|UniProtKB=A0A8V0ZL67	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_5g9\|UniProtKB=Q5ZLN5	Gallus gallus	O
XENLA\|Gene=tardbp.S\|UniProtKB=A0A8J0TE74	Xenopus laevis	O
XENLA\|Gene=tardbp.L\|UniProtKB=A0A8J0T838	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-974453\|UniProtKB=Q28F51	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000003593.2\|UniProtKB=H2LEV4	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000005188.2\|UniProtKB=A0A3B3I3X8	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030131-3777\|UniProtKB=Q802C7	Danio rerio	O
DANRE\|Gene=tardbpl\|UniProtKB=A0A8M9PSZ1	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000006604.1\|UniProtKB=W5MHW9	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000000050.3\|UniProtKB=Q4H2Q6	Ciona intestinalis	O
BRAFL\|Gene=LOC118430725\|UniProtKB=A0A9J7NCB5	Branchiostoma floridae	O
BRAFL\|Gene=LOC118430918\|UniProtKB=A0A9J7MB70	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC584774\|UniProtKB=A0A7M7NWT5	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC115924609\|UniProtKB=A0A7M7NZU7	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00006514\|UniProtKB=D0VWM8	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00026137\|UniProtKB=A8WSH3	Caenorhabditis briggsae	O
DROME\|FlyBase=FBgn0036496\|UniProtKB=Q9VUN2	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0025790\|UniProtKB=Q8SXP8	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP003497\|UniProtKB=Q7PSL3	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC006055\|UniProtKB=D6WYQ8	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_97182\|UniProtKB=E9G0X0	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW012026\|UniProtKB=B7QFB3	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG157599\|UniProtKB=T1EMD7	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG170286\|UniProtKB=T1F2V8	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g240700\|UniProtKB=A7RU25	Nematostella vectensis	O
MOUSE\|MGI=MGI=1921734\|UniProtKB=Q9D3U4	Mus musculus	O
RAT\|RGD=1562219\|UniProtKB=M0R9X3	Rattus norvegicus	O
PIG\|Ensembl=ENSSSCG00000012473.5\|UniProtKB=A0A287A550	Sus scrofa	O
HUMAN\|HGNC=5037\|UniProtKB=O14979	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000016217.7\|UniProtKB=H2QPS8	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000003714.3\|UniProtKB=G3QMB5	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000015777.4\|UniProtKB=H9ESS0	Macaca mulatta	O
MOUSE\|MGI=MGI=1355299\|UniProtKB=Q9Z130	Mus musculus	O
RAT\|RGD=1309950\|UniProtKB=Q3SWU3	Rattus norvegicus	O
PIG\|Ensembl=ENSSSCG00000037245.3\|UniProtKB=A0A286ZYE7	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000022692.4\|UniProtKB=A0A3Q2LIC8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000000455.5\|UniProtKB=M3VUT2	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845018924.1\|UniProtKB=A0A8I3NY09	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000011916.4\|UniProtKB=F7E028	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000004651.3\|UniProtKB=F7FH44	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010004003.1\|UniProtKB=A0A8V0XFL4	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_29l7\|UniProtKB=Q5ZI72	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000010416.4\|UniProtKB=G1KK24	Anolis carolinensis	O
XENLA\|Gene=hnrnpdl-b\|UniProtKB=Q6NU14	Xenopus laevis	O
XENLA\|Gene=hnrnpdl.S\|UniProtKB=A0A8J0U4L6	Xenopus laevis	O
XENLA\|Gene=hnrnpdl-a\|UniProtKB=Q7ZX83	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-495016\|UniProtKB=Q640A2	Xenopus tropicalis	O
DANRE\|ZFIN=ZDB-GENE-040426-2717\|UniProtKB=Q7SXN2	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000010736.1\|UniProtKB=W5MXP4	lepisosteus oculatus	O
HUMAN\|HGNC=5036\|UniProtKB=Q14103	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000016215.6\|UniProtKB=H2QPS6	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000026760.2\|UniProtKB=G3SB22	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000060484.1\|UniProtKB=F7AVH8	Macaca mulatta	O
MOUSE\|MGI=MGI=101947\|UniProtKB=Q60668	Mus musculus	O
RAT\|RGD=620365\|UniProtKB=Q9JJ54	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000013952.6\|UniProtKB=A6H6Y0	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000009249.5\|UniProtKB=F1RVC9	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000055320.1\|UniProtKB=F6Z0C6	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000027404.4\|UniProtKB=A0A337SSS9	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845018743.1\|UniProtKB=A0A8I3P1F3	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000011898.4\|UniProtKB=A0A5F8H1B6	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000001932.4\|UniProtKB=A0A6I8PMM6	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010004018.1\|UniProtKB=A0A8V0XIC8	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000010342.4\|UniProtKB=A0A803T0C8	Anolis carolinensis	O
XENLA\|Gene=LOC108704105\|UniProtKB=A0A8J0TW38	Xenopus laevis	O
XENLA\|Gene=hnrnpd.L\|UniProtKB=A0A1L8HVK9	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-988375\|UniProtKB=A0A803KL05	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000001833.2\|UniProtKB=H2L8V3	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-070424-97\|UniProtKB=A4QP67	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000010743.1\|UniProtKB=W5MXQ6	lepisosteus oculatus	O
PANTR\|Ensembl=ENSPTRG00000048246.1\|UniProtKB=A0A2I3TB76	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000028444.2\|UniProtKB=G3S989	Gorilla gorilla gorilla	O
HUMAN\|HGNC=5034\|UniProtKB=Q99729	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000017601.6\|UniProtKB=K7CPF8	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000011692.3\|UniProtKB=G3R7R0	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000003996.4\|UniProtKB=H9YVR7	Macaca mulatta	O
MOUSE\|MGI=MGI=1330294\|UniProtKB=Q99020	Mus musculus	O
RAT\|RGD=69255\|UniProtKB=Q9QX81	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000013627.6\|UniProtKB=A0A3Q1LZD9	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000001932.4\|UniProtKB=F1SHL4	Sus scrofa	O
PIG\|Ensembl=ENSSSCG00000014031.5\|UniProtKB=A0A287BMB6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000018242.4\|UniProtKB=A0A9L0SWC0	Equus caballus	O
CANLF\|Ensembl=ENSCAFG00845009974.1\|UniProtKB=A0A8I3NPT9	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000004217.4\|UniProtKB=A0A5F8G9E0	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000004998.4\|UniProtKB=F7GB01	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010015142.1\|UniProtKB=A0A8V0YRG0	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000016946.4\|UniProtKB=G1KTC4	Anolis carolinensis	O
XENLA\|Gene=hnrnpab.L\|UniProtKB=Q7ZYE9	Xenopus laevis	O
XENLA\|Gene=hnrnpab.S\|UniProtKB=Q6GM69	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-6042555\|UniProtKB=Q28BP1	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000005327.2\|UniProtKB=H2LL08	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030131-185\|UniProtKB=Q6NYU8	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-040426-2516\|UniProtKB=Q6NYA1	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000009773.1\|UniProtKB=W5MU82	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000016737.2\|UniProtKB=F6QZW1	Ciona intestinalis	O
CIOIN\|Ensembl=ENSCING00000003877.3\|UniProtKB=F6XGK4	Ciona intestinalis	O
BRAFL\|Gene=LOC118411250\|UniProtKB=A0A9J7KTF9	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC592285\|UniProtKB=A0A7M7HFN5	Strongylocentrotus purpuratus	O
DROME\|FlyBase=FBgn0263396\|UniProtKB=Q08473	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP006668\|UniProtKB=A0NEX1	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP000399\|UniProtKB=F5HJK0	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC000928\|UniProtKB=D6W948	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_189289\|UniProtKB=E9HDK2	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW007146\|UniProtKB=B7PVI7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG72414\|UniProtKB=T1G0Z7	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG77494\|UniProtKB=T1G2Y6	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG94668\|UniProtKB=T1G921	helobdella robusta	O
STRPU\|EnsemblGenome=LOC592907\|UniProtKB=A0A7M7MYM6	Strongylocentrotus purpuratus	O
PRIPA\|EnsemblGenome=WBGene00276889\|UniProtKB=A0A2A6D0C3	Pristionchus pacificus	O
HELRO\|EnsemblGenome=HelroG178116\|UniProtKB=T1FCR6	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG132012\|UniProtKB=T1EHX0	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g86628\|UniProtKB=A7RM72	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g245351\|UniProtKB=A7SHQ6	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_30329\|UniProtKB=A9VDN2	Monosiga brevicollis	O
CANAL\|CGD=CAL0000199454\|UniProtKB=A0A1D8PIP0	Candida albicans	O
PUCGT\|EnsemblGenome=PGTG_20403\|UniProtKB=E3NXZ8	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_07133\|UniProtKB=E3K9E2	Puccinia graminis	O
ENTH1\|EnsemblGenome=EHI_183100\|UniProtKB=C4LV83	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0279695\|UniProtKB=Q54WE9	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_30303\|UniProtKB=F0ZF84	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_23_0730\|UniProtKB=Q4QB90	Leishmania major	O
LEIMA\|EnsemblGenome=LMJF_24_1570\|UniProtKB=Q4QAH4	Leishmania major	O
TRIV3\|Gene_ORFName=TVAG_108440\|UniProtKB=A2EQG8	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_345400\|UniProtKB=A2EW18	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_0916700\|UniProtKB=Q8I2Y5	Plasmodium falciparum	O
PLAF7\|EnsemblGenome=PF3D7_0414500\|UniProtKB=Q8I1U3	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00022603001\|UniProtKB=A0E2B4	Paramecium tetraurelia	O
CHLRE\|EnsemblGenome=CHLRE_07g330300v5\|UniProtKB=A0A2K3DJU4	Chlamydomonas reinhardtii	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a008302mg\|UniProtKB=A0A022R542	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107824717\|UniProtKB=A0A1S4D0S3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107799939\|UniProtKB=A0A1S4APY9	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi14g01694\|UniProtKB=F6HUU8	Vitis vinifera	LDO
BRANA\|Gene_ORFName=DARMORV10_C04P47330.1\|UniProtKB=A0A078HEZ2	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A04P13550.1\|UniProtKB=A0A078HXL9	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra025568\|UniProtKB=M4E9W2	Brassica campestris	LDO
GOSHI\|Gene=LOC107892127\|UniProtKB=A0A1U8IA10	Gossypium hirsutum	O
GOSHI\|Gene=LOC107892251\|UniProtKB=A0A1U8IAH1	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_016971\|UniProtKB=A0A061EDK8	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g016617mg\|UniProtKB=A0A067EML5	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_001G344900v3\|UniProtKB=B9GI65	Populus trichocarpa	LDO
SOYBN\|EnsemblGenome=GLYMA_19G061100\|UniProtKB=I1N727	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_16G070900\|UniProtKB=I1MLU4	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_6g004810\|UniProtKB=A0A072U4W5	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_3G839850\|UniProtKB=A0A0A0LG75	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G292100\|UniProtKB=M5XCB9	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_48637\|UniProtKB=D8RC63	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c26_4470\|UniProtKB=A0A2K1IBU7	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_17570\|UniProtKB=A0A2K1KNW2	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_17440\|UniProtKB=A0A2K1KNV9	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0002s0093\|UniProtKB=A0A2R6XU25	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001670110\|UniProtKB=A0A1Y1HZ05	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_002220020\|UniProtKB=A0A1Y1IAM8	Klebsormidium nitens	O