PANTHER Gene Information

Gene Symbol(s):

AMTR_s00061p00032260

Organism:

Amborella trichopoda

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Gene Name:

RRM domain-containing protein

Gene ID:

AMTR_s00061p00032260

Protein ID:

U5DC31

Persistent Id:

PTN004470656

Alternate Ids:

586775594(GI)	U5DC31(Synonym)
KI392075(EMBL)	AMTR_s00061p00032260(Ensembl)
XP_006857530(refSeq)	U5DC31_AMBTC(UniProtKB-ID)
18447369(GeneID)	ERN18997(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	OS02G0815200 PROTEIN (PTHR48025)
PANTHER Subfamily:	RNA-BINDING PROTEIN CP33, CHLOROPLASTIC (PTHR48025:SF11)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	rRNA processing
PANTHER GO-slim Cellular Component:	chloroplast thylakoid membrane
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, mRNA binding
GO BP Complete:	chloroplast rRNA processing, chloroplast RNA processing
GO CC Complete:	chloroplast stroma, chloroplast, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BOVIN\|Gene=RBM14\|UniProtKB=Q5EA36	Bos taurus	O
XENLA\|Gene=rbm14.L\|UniProtKB=Q32N78	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-491627\|UniProtKB=Q6P885	Xenopus tropicalis	O
HORSE\|Ensembl=ENSECAG00000022361.4\|UniProtKB=A0A9L0RBP3	Equus caballus	O
XENLA\|Gene=tial1.L\|UniProtKB=A0A1L8FIA8	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000045788\|UniProtKB=Q28BS8	Xenopus tropicalis	O
XENLA\|Gene=tia1.L\|UniProtKB=Q68EU5	Xenopus laevis	O
XENTR\|Gene=tia1\|UniProtKB=A0A8J0SI21	Xenopus tropicalis	O
HUMAN\|HGNC=17940\|UniProtKB=Q9P2K5	Homo sapiens	O
HUMAN\|HGNC=5046\|UniProtKB=P52272	Homo sapiens	O
RAT\|RGD=1306891\|UniProtKB=D4A1W5	Rattus norvegicus	O
MONDO\|Ensembl=ENSMODG00000005250.4\|UniProtKB=A0A5F8GJ19	Monodelphis domestica	O
ANOCA\|Ensembl=ENSACAG00000041135.1\|UniProtKB=A0A803SNY1	Anolis carolinensis	O
XENLA\|Gene=tdrd10.L\|UniProtKB=A0A8J1LJJ0	Xenopus laevis	O
XENTR\|Gene=tdrd10\|UniProtKB=A0A8J0R8L7	Xenopus tropicalis	O
XENLA\|Gene=rbm4b.L\|UniProtKB=Q640I0	Xenopus laevis	O
XENLA\|Gene=rbm4b.S\|UniProtKB=Q6GPD7	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-494431\|UniProtKB=Q6P4L3	Xenopus tropicalis	O
LEPOC\|Ensembl=ENSLOCG00000002772.1\|UniProtKB=W5M4F1	lepisosteus oculatus	O
BRAFL\|Gene=LOC118431372\|UniProtKB=A0A9J7MCP0	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC586576\|UniProtKB=A0A7M7HPC9	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00022771\|UniProtKB=D0G911	Caenorhabditis elegans	O
ANOGA\|EnsemblGenome=AGAP028511\|UniProtKB=A0A0E4G8F0	Anopheles gambiae	O
IXOSC\|EnsemblGenome=ISCW021980\|UniProtKB=B7QFY7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG73589\|UniProtKB=T1G1G2	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g246176\|UniProtKB=A7SMB3	Nematostella vectensis	O
SCHJY\|EnsemblGenome=SJAG_01469\|UniProtKB=B6JY09	Schizosaccharomyces japonicus	O
SCHJY\|EnsemblGenome=SJAG_03283\|UniProtKB=B6K3U2	Schizosaccharomyces japonicus	O
USTMA\|EnsemblGenome=UMAG_00254\|UniProtKB=A0A0D1E7F4	Ustilago maydis	O
USTMA\|EnsemblGenome=UMAG_10723\|UniProtKB=A0A0D1DR22	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_13383\|UniProtKB=E3KS89	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_00626\|UniProtKB=E3JQH9	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_22812\|UniProtKB=F4NVV2	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0284167\|UniProtKB=Q54Q30	Dictyostelium discoideum	O
TRIV3\|Gene_ORFName=TVAG_043050\|UniProtKB=A2F6R9	Trichomonas vaginalis	O
ZOSMR\|Gene_ORFName=ZOSMA_418G00060\|UniProtKB=A0A0K9P501	Zostera marina	O
MUSAM\|EnsemblGenome=Ma04_g25980\|UniProtKB=A0A804ITZ2	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_030950mg\|UniProtKB=K3ZWG8	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G152800\|UniProtKB=C5X861	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb308420\|UniProtKB=A0A804Q7A5	Zea mays	O
ORYSJ\|EnsemblGenome=Os09g0279500\|UniProtKB=Q6H443	Oryza sativa	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0471050\|UniProtKB=F2DD45	Hordeum vulgare subsp. vulgare	O
SPIOL\|Gene=LOC110774927\|UniProtKB=A0A9R0HR97	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0759561\|UniProtKB=A0A251S0K5	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0817931\|UniProtKB=A0A251RTM5	Helianthus annuus	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a012437mg\|UniProtKB=A0A022QEJ6	Erythranthe guttata	O
TOBAC\|Gene=LOC107798186\|UniProtKB=A0A1S4AJ51	Nicotiana tabacum	O
TOBAC\|Gene=LOC107797860\|UniProtKB=A0A1S4AHU7	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi13g01777\|UniProtKB=D7T2W3	Vitis vinifera	O
BRACM\|EnsemblGenome=Bra033451\|UniProtKB=M4EXB4	Brassica campestris	O
BRACM\|EnsemblGenome=Bra006904\|UniProtKB=M4CRR5	Brassica campestris	O
ARATH\|TAIR=locus=2083810\|UniProtKB=Q8VYM4	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107914044\|UniProtKB=A0A1U8K6Y9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107959531\|UniProtKB=A0A1U8PIS4	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_005932\|UniProtKB=A0A061DVN6	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g025070mg\|UniProtKB=A0A067H6Z0	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_009G065900v3\|UniProtKB=A0A2K1Z3W8	Populus trichocarpa	O
RICCO\|Gene_ORFName=RCOM_1526810\|UniProtKB=B9RHH4	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_08G151700\|UniProtKB=A0A0R0ISB0	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_15G271200\|UniProtKB=A0A0R4J5H0	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g027140\|UniProtKB=G7J1T1	Medicago truncatula	O
CUCSA\|EnsemblGenome=Csa_7G428960\|UniProtKB=A0A0A0K8E7	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_2G007400\|UniProtKB=M5X3H8	Prunus persica	O
ZOSMR\|Gene_ORFName=ZOSMA_29G01270\|UniProtKB=A0A0K9PBX3	Zostera marina	O
SORBI\|EnsemblGenome=SORBI_3006G197700\|UniProtKB=C5YF03	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb072370\|UniProtKB=B6SUJ3	Zea mays	O
BRADI\|EnsemblGenome=BRADI_5g19970v3\|UniProtKB=I1J161	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0197190\|UniProtKB=A0A8I6XCR9	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2D02G447500\|UniProtKB=A0A1D5UJ90	Triticum aestivum	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a010436mg\|UniProtKB=A0A022R0C1	Erythranthe guttata	O
CITSI\|Gene_ORFName=CISIN_1g044184mg\|UniProtKB=A0A067D891	Citrus sinensis	O
RICCO\|Gene_ORFName=RCOM_1279020\|UniProtKB=B9SNU9	Ricinus communis	O
JUGRE\|Gene=LOC108984456\|UniProtKB=A0A2I4DXV7	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_3G009490\|UniProtKB=A0A0A0L1U2	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_5G034000\|UniProtKB=A0A251P392	Prunus persica	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0594060\|UniProtKB=A0A8I6YUZ6	Hordeum vulgare subsp. vulgare	O
HELAN\|Gene_ORFName=HanXRQr2_Chr05g0237431\|UniProtKB=A0A9K3J3Q4	Helianthus annuus	O
SOYBN\|EnsemblGenome=GLYMA_06G100200\|UniProtKB=I1K9U6	Glycine max	O
JUGRE\|EnsemblGenome=Jr06_05430\|UniProtKB=A0A2I4FQL5	Juglans regia	O
SETIT\|EnsemblGenome=SETIT_003458mg\|UniProtKB=K3XNI5	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3001G128200\|UniProtKB=C5WNX0	Sorghum bicolor	O
ORYSJ\|Gene_OrderedLocusName=Os05g0223500\|UniProtKB=A0A0P0WJD8	Oryza sativa	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0408251\|UniProtKB=A0A9K3IA13	Helianthus annuus	O
BRACM\|EnsemblGenome=Bra011528\|UniProtKB=M4D4X1	Brassica campestris	O
ZOSMR\|Gene_ORFName=ZOSMA_1G02230\|UniProtKB=A0A0K9PMQ3	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma11_g23540\|UniProtKB=A0A804LB68	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_030416mg\|UniProtKB=K3ZUY5	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3002G038300\|UniProtKB=C5X9M6	Sorghum bicolor	LDO
ORYSJ\|EnsemblGenome=Os07g0158300\|UniProtKB=A0A0P0X2H7	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g57190v3\|UniProtKB=I1H3N2	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0152170\|UniProtKB=A0A8I6XD40	Hordeum vulgare subsp. vulgare	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0582921\|UniProtKB=A0A251SU91	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a009876mg\|UniProtKB=A0A022PV47	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107767634\|UniProtKB=A0A1S3XR72	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107768838\|UniProtKB=A0A1S3XUD0	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi08g00290\|UniProtKB=D7U8S8	Vitis vinifera	LDO
BRACM\|EnsemblGenome=Bra033438\|UniProtKB=M4EXA2	Brassica campestris	O
BRACM\|EnsemblGenome=Bra012807\|UniProtKB=M4D8J7	Brassica campestris	LDO
ARATH\|TAIR=locus=2079874\|UniProtKB=Q39061	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107899408\|UniProtKB=A0A1U8IR67	Gossypium hirsutum	O
GOSHI\|Gene=LOC107916627\|UniProtKB=A0A1U8KL46	Gossypium hirsutum	O
GOSHI\|Gene=LOC107914412\|UniProtKB=A0A1U8KDS7	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_022982\|UniProtKB=A0A061ETW1	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g020607mg\|UniProtKB=A0A067FTD7	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_006G202000v3\|UniProtKB=A0A2K2A561	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_016G068300v3\|UniProtKB=A0A2K1XBX6	Populus trichocarpa	LDO
SOYBN\|EnsemblGenome=GLYMA_10G082600\|UniProtKB=K7LI32	Glycine max	O
MEDTR\|EnsemblGenome=MTR_1g056520\|UniProtKB=G7I8I9	Medicago truncatula	O
SOYBN\|EnsemblGenome=GLYMA_03G202900\|UniProtKB=I1JQ98	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G200700\|UniProtKB=I1NAV4	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_7g106440\|UniProtKB=A0A072U4H5	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_3G782700\|UniProtKB=A0A0A0LBL6	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G093200\|UniProtKB=A0A251N947	Prunus persica	LDO
PHYPA\|EnsemblGenome=Pp3c24_17170\|UniProtKB=A0A2K1IH50	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c13_15440\|UniProtKB=A0A7I4AKX9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c24_17150\|UniProtKB=A0A2K1IH48	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_16740\|UniProtKB=A0A2K1K7L6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c12_9890\|UniProtKB=A0A2K1JQ71	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0006s0092\|UniProtKB=A0A2R6XPL7	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0042s0009\|UniProtKB=A0A2R6X1G2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0168s0008\|UniProtKB=A0A2R6W3A4	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0183s0014\|UniProtKB=A0A2R6W1T2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0012s0133\|UniProtKB=A0A2R6XJB8	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000500340\|UniProtKB=A0A1Y1HTE6	Klebsormidium nitens	O