PANTHER Gene Information

Gene Symbol(s):

TCM_005932

Organism:

Theobroma cacao

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Gene Name:

RNA-binding family protein

Gene ID:

TCM_005932

Protein ID:

A0A061DVN6

Persistent Id:

PTN004470810

Alternate Ids:

A0A061DVN6(Synonym)	TCM_005932(Ensembl)
508704854(GI)	EOX96750(EMBL-CDS)
CM001879(EMBL)	A0A061DVN6_THECC(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	OS02G0815200 PROTEIN (PTHR48025)
PANTHER Subfamily:	SMALL RIBOSOMAL SUBUNIT PROTEIN CS22 (PTHR48025:SF4)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	rRNA processing
PANTHER GO-slim Cellular Component:	chloroplast thylakoid membrane
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, mRNA binding, single-stranded DNA binding
GO BP Complete:	response to cold, regulation of seedling development, response to salt stress, negative regulation of response to salt stress, chloroplast rRNA processing, regulation of seed germination, negative regulation of response to water deprivation, response to water deprivation
GO CC Complete:	chloroplast, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BOVIN\|Gene=RBM14\|UniProtKB=Q5EA36	Bos taurus	O
XENLA\|Gene=rbm14.L\|UniProtKB=Q32N78	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-491627\|UniProtKB=Q6P885	Xenopus tropicalis	O
HORSE\|Ensembl=ENSECAG00000022361.4\|UniProtKB=A0A9L0RBP3	Equus caballus	O
XENLA\|Gene=tial1.L\|UniProtKB=A0A1L8FIA8	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000045788\|UniProtKB=Q28BS8	Xenopus tropicalis	O
XENLA\|Gene=tia1.L\|UniProtKB=Q68EU5	Xenopus laevis	O
XENTR\|Gene=tia1\|UniProtKB=A0A8J0SI21	Xenopus tropicalis	O
HUMAN\|HGNC=17940\|UniProtKB=Q9P2K5	Homo sapiens	O
HUMAN\|HGNC=5046\|UniProtKB=P52272	Homo sapiens	O
RAT\|RGD=1306891\|UniProtKB=D4A1W5	Rattus norvegicus	O
MONDO\|Ensembl=ENSMODG00000005250.4\|UniProtKB=A0A5F8GJ19	Monodelphis domestica	O
ANOCA\|Ensembl=ENSACAG00000041135.1\|UniProtKB=A0A803SNY1	Anolis carolinensis	O
XENLA\|Gene=tdrd10.L\|UniProtKB=A0A8J1LJJ0	Xenopus laevis	O
XENTR\|Gene=tdrd10\|UniProtKB=A0A8J0R8L7	Xenopus tropicalis	O
XENLA\|Gene=rbm4b.L\|UniProtKB=Q640I0	Xenopus laevis	O
XENLA\|Gene=rbm4b.S\|UniProtKB=Q6GPD7	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-494431\|UniProtKB=Q6P4L3	Xenopus tropicalis	O
LEPOC\|Ensembl=ENSLOCG00000002772.1\|UniProtKB=W5M4F1	lepisosteus oculatus	O
BRAFL\|Gene=LOC118431372\|UniProtKB=A0A9J7MCP0	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC586576\|UniProtKB=A0A7M7HPC9	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00022771\|UniProtKB=D0G911	Caenorhabditis elegans	O
ANOGA\|EnsemblGenome=AGAP028511\|UniProtKB=A0A0E4G8F0	Anopheles gambiae	O
IXOSC\|EnsemblGenome=ISCW021980\|UniProtKB=B7QFY7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG73589\|UniProtKB=T1G1G2	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g246176\|UniProtKB=A7SMB3	Nematostella vectensis	O
SCHJY\|EnsemblGenome=SJAG_01469\|UniProtKB=B6JY09	Schizosaccharomyces japonicus	O
SCHJY\|EnsemblGenome=SJAG_03283\|UniProtKB=B6K3U2	Schizosaccharomyces japonicus	O
USTMA\|EnsemblGenome=UMAG_00254\|UniProtKB=A0A0D1E7F4	Ustilago maydis	O
USTMA\|EnsemblGenome=UMAG_10723\|UniProtKB=A0A0D1DR22	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_13383\|UniProtKB=E3KS89	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_00626\|UniProtKB=E3JQH9	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_22812\|UniProtKB=F4NVV2	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0284167\|UniProtKB=Q54Q30	Dictyostelium discoideum	O
TRIV3\|Gene_ORFName=TVAG_043050\|UniProtKB=A2F6R9	Trichomonas vaginalis	O
AMBTC\|EnsemblGenome=AMTR_s00061p00032260\|UniProtKB=U5DC31	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_418G00060\|UniProtKB=A0A0K9P501	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g25980\|UniProtKB=A0A804ITZ2	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_030950mg\|UniProtKB=K3ZWG8	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3002G152800\|UniProtKB=C5X861	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb308420\|UniProtKB=A0A804Q7A5	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os09g0279500\|UniProtKB=Q6H443	Oryza sativa	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0471050\|UniProtKB=F2DD45	Hordeum vulgare subsp. vulgare	LDO
SPIOL\|Gene=LOC110774927\|UniProtKB=A0A9R0HR97	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0759561\|UniProtKB=A0A251S0K5	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0817931\|UniProtKB=A0A251RTM5	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a012437mg\|UniProtKB=A0A022QEJ6	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107798186\|UniProtKB=A0A1S4AJ51	Nicotiana tabacum	O
TOBAC\|Gene=LOC107797860\|UniProtKB=A0A1S4AHU7	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi13g01777\|UniProtKB=D7T2W3	Vitis vinifera	LDO
BRACM\|EnsemblGenome=Bra033451\|UniProtKB=M4EXB4	Brassica campestris	O
BRACM\|EnsemblGenome=Bra006904\|UniProtKB=M4CRR5	Brassica campestris	LDO
ARATH\|TAIR=locus=2083810\|UniProtKB=Q8VYM4	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107914044\|UniProtKB=A0A1U8K6Y9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107959531\|UniProtKB=A0A1U8PIS4	Gossypium hirsutum	LDO
CITSI\|Gene_ORFName=CISIN_1g025070mg\|UniProtKB=A0A067H6Z0	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_009G065900v3\|UniProtKB=A0A2K1Z3W8	Populus trichocarpa	LDO
RICCO\|Gene_ORFName=RCOM_1526810\|UniProtKB=B9RHH4	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_08G151700\|UniProtKB=A0A0R0ISB0	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_15G271200\|UniProtKB=A0A0R4J5H0	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g027140\|UniProtKB=G7J1T1	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_7G428960\|UniProtKB=A0A0A0K8E7	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G007400\|UniProtKB=M5X3H8	Prunus persica	LDO
PHYPA\|EnsemblGenome=Pp3c24_17170\|UniProtKB=A0A2K1IH50	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c13_15440\|UniProtKB=A0A7I4AKX9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c24_17150\|UniProtKB=A0A2K1IH48	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_16740\|UniProtKB=A0A2K1K7L6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c12_9890\|UniProtKB=A0A2K1JQ71	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0006s0092\|UniProtKB=A0A2R6XPL7	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0042s0009\|UniProtKB=A0A2R6X1G2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0168s0008\|UniProtKB=A0A2R6W3A4	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0183s0014\|UniProtKB=A0A2R6W1T2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0012s0133\|UniProtKB=A0A2R6XJB8	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000500340\|UniProtKB=A0A1Y1HTE6	Klebsormidium nitens	O