PANTHER Gene Information

Gene Symbol(s):

SMC6B

Organism:

Arabidopsis thaliana

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Gene Name:

Structural maintenance of chromosomes protein 6B

Gene ID:

2161163

Protein ID:

Q9FII7

Persistent Id:

PTN000447996

Alternate Ids:

75333915(GI)	SMC6B(Synonym)
SMC6B(Symbol)	AT5G61460(Ensembl_PRO)
836267(GeneID)	AT5G61460(Ensembl_TRS)
AAD54770(EMBL-CDS)	AF120932(EMBL)
locus:2161163(TAIR)	AT5G61460(Ensembl)
Q9S722(AltAccession)	SMC6B_ARATH(UniProtKB-ID)
NM_125539(refSeq)
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PANTHER Classification

PANTHER Family:	STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 (PTHR19306)
PANTHER Subfamily:	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B (PTHR19306:SF9)
PANTHER GO-slim Molecular Function:	single-stranded DNA binding damaged DNA binding
PANTHER GO-slim Biological Process:	double-strand break repair via homologous recombination
PANTHER GO-slim Cellular Component:	site of double-strand break condensed chromosome transferase complex nucleus
PANTHER protein class:	DNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	damaged DNA binding, single-stranded DNA binding
GO BP Complete:	sister chromatid cohesion, response to X-ray, double-strand break repair via homologous recombination, double-strand break repair
GO CC Complete:	nucleus, site of double-strand break, Smc5-Smc6 complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=20466\|UniProtKB=Q96SB8	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000011677.5\|UniProtKB=A0A2I3SPZ8	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000003864.3\|UniProtKB=G3QMQ4	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000012056.4\|UniProtKB=A0A1D5Q104	Macaca mulatta	O
MOUSE\|MGI=MGI=1914491\|UniProtKB=Q924W5	Mus musculus	O
RAT\|RGD=1311214\|UniProtKB=D4AB26	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000018256.6\|UniProtKB=E1BFH7	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000008614.5\|UniProtKB=F1SCS4	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000022265.3\|UniProtKB=A0A9L0SAH8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000013578.6\|UniProtKB=M3WJ36	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845016537.1\|UniProtKB=A0A8I3NQ06	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000046425.1\|UniProtKB=A0A5F8GK95	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000007190.3\|UniProtKB=F6X9P7	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000022800.3\|UniProtKB=H9H951	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000044713.1\|UniProtKB=A0A5F8HC33	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000011693.4\|UniProtKB=H9H6I4	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000003893.4\|UniProtKB=F7D883	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000010714.4\|UniProtKB=A0A6I8NJ74	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010002372.1\|UniProtKB=E1BWW3	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000001613.4\|UniProtKB=G1K9S9	Anolis carolinensis	O
XENLA\|Gene=LOC108717191\|UniProtKB=A0A8J1KRW1	Xenopus laevis	O
XENLA\|Gene=smc6\|UniProtKB=Q6P9I7	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000044652\|UniProtKB=A0A6I8SJJ1	Xenopus tropicalis	O
XENTR\|Gene=LOC100496941\|UniProtKB=A0A8J0STX2	Xenopus tropicalis	O
XENTR\|Gene=smc6.1\|UniProtKB=A0A8J0R3G1	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000018430.2\|UniProtKB=H2MW46	Oryzias latipes	O
DANRE\|Gene=smc6\|UniProtKB=A0A8M9PV42	Danio rerio	O
ORYLA\|Ensembl=ENSORLG00000013905.2\|UniProtKB=H2MFQ8	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-070705-287\|UniProtKB=A0A8M1NHD0	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000017236.1\|UniProtKB=W5NL09	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000021570.1\|UniProtKB=H2XL64	Ciona intestinalis	O
BRAFL\|Gene=LOC118409497\|UniProtKB=A0A9J7HX12	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC100893240\|UniProtKB=A0A7M7N7J3	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC100893394\|UniProtKB=A0A7M7NLS3	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC584232\|UniProtKB=A0A7M7HGZ6	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00007694\|UniProtKB=Q93250	Caenorhabditis elegans	O
CAEEL\|WormBase=WBGene00010056\|UniProtKB=G5EG17	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00025824\|UniProtKB=A8WTD4	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00278280\|UniProtKB=A0A2A6CIJ4	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0266282\|UniProtKB=Q9VCB8	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP002985\|UniProtKB=F7IWF2	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC005764\|UniProtKB=D6WWE4	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_224715\|UniProtKB=E9GJ94	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_103378\|UniProtKB=E9GJ61	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW014877\|UniProtKB=B7QGR1	Ixodes scapularis	O
NEMVE\|Gene_ORFName=NEMVEDRAFT_v1g113902\|UniProtKB=A7SD29	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG61013\|UniProtKB=B3S9S7	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_22018\|UniProtKB=A9UPA8	Monosiga brevicollis	O
YEAST\|SGD=S000004375\|UniProtKB=Q12749	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER044W\|UniProtKB=Q757G9	Eremothecium gossypii	O
CANAL\|CGD=CAL0000185544\|UniProtKB=Q5AGX1	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_F02365g\|UniProtKB=Q6C360	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_10415\|UniProtKB=C8VHA6	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_3G05440\|UniProtKB=Q4WWD4	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU02402\|UniProtKB=Q7S4N3	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_14153\|UniProtKB=A7F972	Sclerotinia sclerotiorum	O
SCLS1\|EnsemblGenome=SS1G_11001\|UniProtKB=A7F084	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_14536\|UniProtKB=Q0U125	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPCC5E4.06\|UniProtKB=P53692	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_02545\|UniProtKB=B6K0I9	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CND03960\|UniProtKB=Q5KI73	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_00739\|UniProtKB=A0A0D1CH81	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_19860\|UniProtKB=E3LBA0	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_34779\|UniProtKB=F4NZZ5	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_180450\|UniProtKB=C4M294	Entamoeba histolytica	O
ENTH1\|EnsemblGenome=CL6EHI_033700\|UniProtKB=C4M433	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0288993\|UniProtKB=Q54I56	Dictyostelium discoideum	O
GIAIC\|EnsemblGenome=GL50803_7648\|UniProtKB=A8BWV2	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_383600\|UniProtKB=A2EZ69	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_176480\|UniProtKB=A2FTH1	Trichomonas vaginalis	O
THAPS\|EnsemblGenome=THAPSDRAFT_1743\|UniProtKB=B8BRT7	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GEM3_PHYRM\|UniProtKB=H3GEM3	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_12g525100v5\|UniProtKB=A0A2K3D4E3	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_12g525050v5\|UniProtKB=A0A2K3D4C5	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00106p00113730\|UniProtKB=W1NYM1	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_46G00270\|UniProtKB=A0A0K9P278	Zostera marina	O
MUSAM\|EnsemblGenome=Ma05_g13310\|UniProtKB=A0A804J3Z2	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_028787mg\|UniProtKB=K3ZQA7	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G154400\|UniProtKB=C5X880	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb309160\|UniProtKB=C0PG09	Zea mays	O
BRADI\|EnsemblGenome=BRADI_4g08527v3\|UniProtKB=A0A0Q3H0U2	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0468410\|UniProtKB=A0A8I6XNT2	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS6B02G071100\|UniProtKB=A0A3B6PHU4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G162400\|UniProtKB=A0A3B6KGQ8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G166500\|UniProtKB=A0A3B6MNL0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCSU02G112500\|UniProtKB=A0A3B6U639	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5B02G159900\|UniProtKB=A0A3B6LKF8	Triticum aestivum	O
NELNU\|Gene=LOC104598515\|UniProtKB=A0A1U8AB63	Nelumbo nucifera	O
SPIOL\|Gene=LOC110782358\|UniProtKB=A0A9R0JPD2	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0041251\|UniProtKB=A0A251VT92	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C900477820\|UniProtKB=A0A9R1WW23	Lactuca sativa	O
SOLLC\|EnsemblGenome=Solyc05g051680.3\|UniProtKB=A0A3Q7GL50	Solanum lycopersicum	O
TOBAC\|Gene=LOC107774285\|UniProtKB=A0A1S3YB74	Nicotiana tabacum	O
TOBAC\|Gene=LOC107786915\|UniProtKB=A0A1S3ZHK2	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi16g00299\|UniProtKB=D7U753	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_A02900\|UniProtKB=A0A059DKA6	Eucalyptus grandis	O
BRANA\|Gene_ORFName=GSBRNA2T00020287001\|UniProtKB=A0A078J3M8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra012956\|UniProtKB=M4D8Z6	Brassica campestris	LDO
GOSHI\|Gene=LOC107933515\|UniProtKB=A0A1U8M6D4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107955117\|UniProtKB=A0A1U8P7Q7	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_014905\|UniProtKB=A0A061G0D8	Theobroma cacao	O
POPTR\|EnsemblGenome=POPTR_003G107700v3\|UniProtKB=A0A2K2B516	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_06G133600\|UniProtKB=A0A251L524	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_1500700\|UniProtKB=B9R9U6	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_09G229900\|UniProtKB=I1L5P0	Glycine max	O
MEDTR\|EnsemblGenome=MTR_4g061050\|UniProtKB=G7JRH6	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_4g036760\|UniProtKB=A0A072UIF4	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr01_03090\|UniProtKB=A0A2I4GB24	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_4G022340\|UniProtKB=A0A0A0KXK2	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_2G275800\|UniProtKB=A0A251QMH6	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_60327\|UniProtKB=D8QR98	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_60332\|UniProtKB=D8RJK4	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c11_11190\|UniProtKB=A0A2K1JUB6	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0003s0057\|UniProtKB=A0A2R6XSR2	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_006080090\|UniProtKB=A0A1Y1IH23	Klebsormidium nitens	O