PANTHER Gene Information

Gene Symbol(s):

BnaCnng62500D

Organism:

Brassica napus

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Tree

Gene Name:

Serine hydroxymethyltransferase

Gene ID:

GSBRNA2T00084232001

Protein ID:

A0A078JNV3

Persistent Id:

PTN007526066

Alternate Ids:

A0A078JNV3_BRANA(UniProtKB-ID)	CDY69223(EMBL-CDS)
GSBRNA2T00084232001(Ensembl)	674861372(GI)
A0A078JNV3(Synonym)	HG994372(EMBL)
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PANTHER Classification

PANTHER Family:	SERINE HYDROXYMETHYLTRANSFERASE (PTHR11680)
PANTHER Subfamily:	SERINE HYDROXYMETHYLTRANSFERASE 1 (PTHR11680:SF35)
PANTHER GO-slim Molecular Function:	anion binding heterocyclic compound binding organic cyclic compound binding transferase activity, transferring one-carbon groups
PANTHER GO-slim Biological Process:	proteinogenic amino acid biosynthetic process folic acid-containing compound metabolic process L-amino acid biosynthetic process
PANTHER GO-slim Cellular Component:	cytoplasm
PANTHER protein class:	methyltransferase

Pathway Categories:

Serine glycine biosynthesis

Glycine hydroxymethyltransferase

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, transferase activity
GO BP Complete:	glycine biosynthetic process from serine, tetrahydrofolate interconversion, tetrahydrofolate metabolic process, one-carbon metabolic process
GO CC Complete:	cytoplasm, mitochondrion

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g129467\|UniProtKB=A7SS63	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_13528\|UniProtKB=A9UQD9	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_11208\|UniProtKB=A9V8I9	Monosiga brevicollis	O
CRYNJ\|EnsemblGenome=CNJ00410\|UniProtKB=Q5KAU8	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_10586\|UniProtKB=A0A0D1CD49	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_05338\|UniProtKB=E3K747	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_09674\|UniProtKB=E3KI36	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_18481\|UniProtKB=F4NRS4	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0291652\|UniProtKB=Q54EW1	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_97107\|UniProtKB=F0ZDZ0	Dictyostelium purpureum	O
DICDI\|dictyBase=DDB_G0277947\|UniProtKB=Q54Z26	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_53574\|UniProtKB=F0ZDH7	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_14_1320\|UniProtKB=Q4QFK2	Leishmania major	O
LEIMA\|EnsemblGenome=LMJF_28_2370\|UniProtKB=Q4Q828	Leishmania major	O
TRIV3\|Gene_ORFName=TVAG_109540\|UniProtKB=A2EAE3	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1456100\|UniProtKB=Q8IKR8	Plasmodium falciparum	O
PLAF7\|EnsemblGenome=PF3D7_1235600\|UniProtKB=Q8I566	Plasmodium falciparum	O
THAPS\|EnsemblGenome=THAPSDRAFT_26190\|UniProtKB=B8C1A2	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_26031\|UniProtKB=B8CCS6	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GN18_PHYRM\|UniProtKB=H3GN18	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_06g293950v5\|UniProtKB=A0A2K3DQH9	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00013p00262120\|UniProtKB=W1PQW2	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_5G02200\|UniProtKB=A0A0K9NUP3	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_42G00470\|UniProtKB=A0A0K9P1R8	Zostera marina	O
MUSAM\|EnsemblGenome=Ma08_g00320\|UniProtKB=A0A804K1B4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma09_g01590\|UniProtKB=A0A804KET4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma09_g07020\|UniProtKB=A0A804KGU3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma06_g08130\|UniProtKB=A0A804JDX4	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_021684mg\|UniProtKB=K3Z566	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3008G144800\|UniProtKB=C5YQS6	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb030210\|UniProtKB=A0A1D6KEP0	Zea mays	O
ORYSJ\|EnsemblGenome=Os12g0409000\|UniProtKB=Q2QT32	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_4g08097v3\|UniProtKB=I1IIP2	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0057870\|UniProtKB=F2CRV8	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS1B02G232200\|UniProtKB=A0A3B5YZ07	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G218700\|UniProtKB=A0A3B5Y1D7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G220400\|UniProtKB=A0A3B5ZV64	Triticum aestivum	O
SETIT\|EnsemblGenome=SETIT_001011mg\|UniProtKB=K3XGJ1	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_026132mg\|UniProtKB=K3ZHT0	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3005G113300\|UniProtKB=C5Y297	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb170020\|UniProtKB=K7TSD2	Zea mays	O
ORYSJ\|EnsemblGenome=Os11g0455800\|UniProtKB=A0A0P0Y248	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_4g19470v3\|UniProtKB=I1ILT7	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0201400\|UniProtKB=F2DET3	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2A02G493700\|UniProtKB=A0A1D5UPW5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G521700\|UniProtKB=A0A3B6CE87	Triticum aestivum	O
NELNU\|Gene=LOC104609082\|UniProtKB=A0A1U8AZ14	Nelumbo nucifera	O
SPIOL\|Gene=LOC110798990\|UniProtKB=A0A9R0J274	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0635091\|UniProtKB=A0A251SFI7	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0704601\|UniProtKB=A0A251SAW2	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C200066860\|UniProtKB=A0A9R1XQ89	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a005792mg\|UniProtKB=A0A022QS28	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_15282\|UniProtKB=A0A2G2ZJS8	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400015745\|UniProtKB=M1BAA6	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc05g053810.3\|UniProtKB=A0A3Q7GNF6	Solanum lycopersicum	O
TOBAC\|Gene=LOC107761184\|UniProtKB=A0A1S3X4P8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107800464\|UniProtKB=A0A1S4ARC4	Nicotiana tabacum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400004660\|UniProtKB=M1A0B7	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc12g098490.2\|UniProtKB=A0A3Q7JE99	Solanum lycopersicum	O
TOBAC\|Gene=LOC107830241\|UniProtKB=A0A1S4DIW7	Nicotiana tabacum	O
TOBAC\|Gene=LOC107820931\|UniProtKB=A0A1S4CP79	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi05g01091\|UniProtKB=F6GWF3	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_E00610\|UniProtKB=A0A059C1S6	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_E00603\|UniProtKB=A0A059C1A4	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_H02679\|UniProtKB=A0A059B1U0	Eucalyptus grandis	O
BRACM\|EnsemblGenome=Bra032749\|UniProtKB=M4EVB6	Brassica campestris	O
ARATH\|TAIR=locus=2119545\|UniProtKB=Q9SVM4	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2129251\|UniProtKB=O23254	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107943813\|UniProtKB=A0A1U8N245	Gossypium hirsutum	O
GOSHI\|Gene=LOC107890500\|UniProtKB=A0A1U8HWR2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107914785\|UniProtKB=A0A1U8K9W3	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_020228\|UniProtKB=A0A061ES58	Theobroma cacao	O
POPTR\|EnsemblGenome=POPTR_017G059300v3\|UniProtKB=B9N0U0	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G320400v3\|UniProtKB=A9P855	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_03G144000\|UniProtKB=A0A2C9WA06	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_15G056900\|UniProtKB=A0A2C9UD42	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_15G056800\|UniProtKB=A0A2C9UE67	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0523510\|UniProtKB=B9S9Y7	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_05G152100\|UniProtKB=C6ZJY6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_08G108900\|UniProtKB=A0A0R0IUS1	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g084310\|UniProtKB=G7JAR7	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_8g081510\|UniProtKB=G7LH57	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr12_08820\|UniProtKB=A0A2I4GXC4	Juglans regia	O
JUGRE\|EnsemblGenome=Jr07_14600\|UniProtKB=A0A2I4GJJ1	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_2G145880\|UniProtKB=A0A0A0LKC8	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_1G165100\|UniProtKB=M5XDY2	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_270660\|UniProtKB=D8RA85	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_166496\|UniProtKB=D8QYX4	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c15_6270\|UniProtKB=A9TQS1	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0096s0018\|UniProtKB=A0A2R6WFN1	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001330090\|UniProtKB=A0A0U9HJM4	Klebsormidium nitens	O
NITMS\|EnsemblGenome=Nmar_1793\|UniProtKB=A9A3Y9	Nitrosopumilus maritimus	O
KORCO\|EnsemblGenome=Kcr_0992\|UniProtKB=B1L5K9	Korarchaeum cryptofilum	O
SACS2\|EnsemblGenome=SSO0530\|UniProtKB=Q9UWT5	Sulfolobus solfataricus	O
PYRAE\|EnsemblGenome=PAE0798\|UniProtKB=Q8ZYF9	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_3520\|UniProtKB=Q8TK94	Methanosarcina acetivorans	O
METJA\|EnsemblGenome=MJ_1597\|UniProtKB=Q58992	Methanocaldococcus jannaschii	O
HALSA\|EnsemblGenome=VNG_1414G\|UniProtKB=Q9HPY5	Halobacterium salinarum	O
THEKO\|EnsemblGenome=TK0528\|UniProtKB=Q5JF06	Thermococcus kodakaraensis	O
CHLAA\|EnsemblGenome=Caur_2543\|UniProtKB=A9WI58	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO5364\|UniProtKB=Q9K4E0	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO4837\|UniProtKB=Q9KZA9	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO5470\|UniProtKB=O86565	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv1093\|UniProtKB=P9WGI9	Mycobacterium tuberculosis	O
MYCTU\|Gene_OrderedLocusName=Rv0070c\|UniProtKB=P9WGI7	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_394\|UniProtKB=P47634	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO2595\|UniProtKB=A5I526	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0928\|UniProtKB=Q8DPZ0	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02354\|UniProtKB=Q2FWE5	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00617\|UniProtKB=Q8Y4B2	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_36900\|UniProtKB=P39148	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_5316\|UniProtKB=Q814V2	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_0720\|UniProtKB=Q9WZH9	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_0038\|UniProtKB=Q9RYB2	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC92310\|UniProtKB=Q7ND67	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17124\|UniProtKB=P77962	Synechocystis	O
LEPIN\|EnsemblGenome=LA_1409\|UniProtKB=Q8F6A0	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_0738\|UniProtKB=Q8A9S7	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_432\|UniProtKB=O84439	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB6215\|UniProtKB=Q7UQN2	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_479\|UniProtKB=O66776	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1387\|UniProtKB=B5YFZ0	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_0810\|UniProtKB=B8E008	Dictyoglomus turgidum	O
BRADU\|EnsemblGenome=BAC50298\|UniProtKB=P24060	Bradyrhizobium diazoefficiens	O
VIBCH\|EnsemblGenome=VC_A0278\|UniProtKB=Q9KMP4	Vibrio cholerae	O
HELPY\|EnsemblGenome=HP_0183\|UniProtKB=P56089	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB1055\|UniProtKB=P56990	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU1607\|UniProtKB=Q74CR5	Geobacter sulfurreducens	O
BRADU\|Gene=glyA\|UniProtKB=Q89HS7	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_1419\|UniProtKB=Q83BT3	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0889\|UniProtKB=P43844	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_3471\|UniProtKB=Q8EBN8	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0941\|UniProtKB=Q9KTG1	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0690\|UniProtKB=Q8PCN4	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA5415\|UniProtKB=Q9HTE9	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2444\|UniProtKB=Q9I138	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA4602\|UniProtKB=Q9HVI7	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2555\|UniProtKB=P0A2E1	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_2548\|UniProtKB=Q8ZCR1	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAA16459\|UniProtKB=P0A825	Escherichia coli	O