PANTHER Gene Information

Gene Symbol(s):

rps-28

Organism:

Caenorhabditis elegans

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Gene Name:

Small ribosomal subunit protein eS28

Gene ID:

WBGene00004497

Protein ID:

Q95Y04

Persistent Id:

PTN000080624

Alternate Ids:

CCD66705(EMBL-CDS)	Y41D4B.5(Ensembl_TRS)
Y41D4B(WormBase_TRS)	FO080782(EMBL)
NP_500115(refSeq)	Y41D4B.5(Ensembl_PRO)
40S ribosomal protein S28(Synonym)	51316898(GI)
WBGene00004497(WormBase)	WBGene00004497(Ensembl)
RS28_CAEEL(UniProtKB-ID)	CE21842(WormBase_PRO)
rps-28(Symbol)
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PANTHER Classification

PANTHER Family:	40S RIBOSOMAL PROTEIN S28 (PTHR10769)
PANTHER Subfamily:	SMALL RIBOSOMAL SUBUNIT PROTEIN ES28 (PTHR10769:SF3)
PANTHER GO-slim Molecular Function:	structural constituent of ribosome
PANTHER GO-slim Biological Process:	non-membrane-bounded organelle assembly maturation of SSU-rRNA protein-RNA complex assembly
PANTHER GO-slim Cellular Component:	cytosolic small ribosomal subunit
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	structural constituent of ribosome
GO BP Complete:	maturation of SSU-rRNA, cytoplasmic translation, ribosomal small subunit assembly, translation
GO CC Complete:	cytoplasm, cytosolic small ribosomal subunit, cytoplasmic side of rough endoplasmic reticulum membrane, rough endoplasmic reticulum, cytosol, endoplasmic reticulum, ribosome, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

GTP hydrolysis and joining of the 60S ribosomal subunit, Cap-dependent Translation Initiation, Translation initiation complex formation, Ribosomal scanning and start codon recognition, Nonsense-Mediated Decay (NMD), L13a-mediated translational silencing of Ceruloplasmin expression, Translation, Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC), Formation of a pool of free 40S subunits, Metabolism of RNA, Eukaryotic Translation Initiation, Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC), SRP-dependent cotranslational protein targeting to membrane, Metabolism of proteins, Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S, Formation of the ternary complex, and subsequently, the 43S complex

Orthologs

ID	Organism	Type
HUMAN\|HGNC=10418\|UniProtKB=P62857	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000040141.2\|UniProtKB=H2RIH6	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000024725.2\|UniProtKB=G3RU06	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000028895.3\|UniProtKB=F7AA98	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1859516\|UniProtKB=P62858	Mus musculus	LDO
RAT\|RGD=11419125\|UniProtKB=F1M168	Rattus norvegicus	O
RAT\|RGD=2323691\|UniProtKB=A0A0A0MY14	Rattus norvegicus	O
RAT\|RGD=11455995\|UniProtKB=A0A8I6APW3	Rattus norvegicus	O
RAT\|RGD=621046\|UniProtKB=P62859	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000002468\|UniProtKB=Q56JX6	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000013597\|UniProtKB=Q6QAT1	Sus scrofa	LDO
FELCA\|Ensembl=ENSFCAG00000040752.1\|UniProtKB=A0A337S9B6	Felis catus	O
FELCA\|Ensembl=ENSFCAG00000024931.3\|UniProtKB=M3X2Q9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845005920.1\|UniProtKB=A0A8I3NCS3	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000025356.2\|UniProtKB=F7E5N0	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000003890.2\|UniProtKB=F7D8M7	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000047078.1\|UniProtKB=A0A6I8PBT4	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010028463.1\|UniProtKB=A0A3Q2U825	Gallus gallus	LDO
XENLA\|Gene=rps28p9.L\|UniProtKB=Q66KP7	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1006614\|UniProtKB=Q0VGV3	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000029846.1\|UniProtKB=A0A3B3H4J8	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-2022\|UniProtKB=Q6PBK3	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002654.1\|UniProtKB=W5M417	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000013272.2\|UniProtKB=F6YMZ5	Ciona intestinalis	LDO
CAEBR\|WormBase=WBGene00034328\|UniProtKB=A8XI84	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304588\|UniProtKB=A6YNJ5	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0039739\|UniProtKB=Q9VAB9	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0085211\|UniProtKB=A8DYY3	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0030136\|UniProtKB=Q9W334	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003412\|UniProtKB=Q7QDK2	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC011517\|UniProtKB=D6W6E2	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_128589\|UniProtKB=E9GMY5	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG72007\|UniProtKB=T1G0U0	helobdella robusta	LDO
NEMVE\|Gene_ORFName=NEMVEDRAFT_v1g149719\|UniProtKB=A7T856	Nematostella vectensis	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_28421\|UniProtKB=A9V846	Monosiga brevicollis	LDO
YEAST\|SGD=S000005693\|UniProtKB=Q3E7X9	Saccharomyces cerevisiae	LDO
YEAST\|SGD=S000004254\|UniProtKB=P0C0X0	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AGR261W\|UniProtKB=Q74ZD8	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000196464\|UniProtKB=A0A1D8PQN0	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_C05148g\|UniProtKB=Q6CCZ9	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_06632\|UniProtKB=Q5AYJ8	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_7G04490\|UniProtKB=Q4WGB8	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU05599\|UniProtKB=Q7S6W5	Neurospora crassa	LDO
PHANO\|EnsemblGenome=SNOG_08190\|UniProtKB=Q0UJ74	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC285.15c\|UniProtKB=P0CT80	Schizosaccharomyces pombe	LDO
SCHPO\|PomBase=SPAC25G10.06\|UniProtKB=P0CT79	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02749\|UniProtKB=B6K127	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND06280\|UniProtKB=Q5KHJ3	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_11202\|UniProtKB=A0A0D1D1U9	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_16766\|UniProtKB=E3L2F3	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_12294\|UniProtKB=F4P5K5	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_038860\|UniProtKB=C4LZQ8	Entamoeba histolytica	LDO
ENTH1\|EnsemblGenome=CL6EHI_021450\|UniProtKB=C4M059	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0285597\|UniProtKB=Q54MZ5	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_47614\|UniProtKB=F0ZKE4	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_26_1630\|UniProtKB=Q4Q931	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.7.230\|UniProtKB=Q57U30	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_3570\|UniProtKB=A8B4F3	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_443060\|UniProtKB=A2FIQ8	Trichomonas vaginalis	LDO
TRIV3\|Gene_ORFName=TVAG_050990\|UniProtKB=A2DQN8	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1461300\|UniProtKB=Q8IKL9	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00003033001\|UniProtKB=A0BII3	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_38925\|UniProtKB=B8CGJ9	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G5A1_PHYRM\|UniProtKB=H3G5A1	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g510450v5\|UniProtKB=A0A2K3D2K9	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_185G00610\|UniProtKB=A0A0K9PSQ1	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_14G00950\|UniProtKB=A0A0K9PWG6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g35170\|UniProtKB=A0A804IXE3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g17760\|UniProtKB=M0SR29	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_038573mg\|UniProtKB=K4AI65	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G493001\|UniProtKB=A0A1Z5SBA4	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb396650\|UniProtKB=A0A804R803	Zea mays	LDO
SETIT\|EnsemblGenome=SETIT_039832mg\|UniProtKB=K4ALQ0	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G402050\|UniProtKB=A0A1Z5SAA0	Sorghum bicolor	LDO
MAIZE\|Gene=RPS28\|UniProtKB=P46302	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb005140\|UniProtKB=B4FW18	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os10g0411700\|UniProtKB=A0A0P0XU17	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g00500v3\|UniProtKB=I1HW13	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G530400\|UniProtKB=W5E8X2	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_001225\|UniProtKB=A0A1U8Q3P8	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_025420\|UniProtKB=A0A1U7Z3S2	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110794368\|UniProtKB=A0A0K9RBJ3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0808761\|UniProtKB=A0A251RR89	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr12g0554101\|UniProtKB=A0A251T3U7	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr09g0361941\|UniProtKB=A0A251TRR5	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0820921\|UniProtKB=A0A251RT10	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0686311\|UniProtKB=A0A251S767	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr07g0306601\|UniProtKB=A0A9K3NGM6	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr10g0423311\|UniProtKB=A0A9K3HV08	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr11g0483711\|UniProtKB=A0A9K3HMW3	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0686301\|UniProtKB=A0A251TVC8	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300142820\|UniProtKB=A0A9R1W3Z4	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a017613mg\|UniProtKB=A0A022QJY6	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a017586mg\|UniProtKB=A0A022QIU3	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_26443\|UniProtKB=A0A2G2YNK0	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_32756\|UniProtKB=A0A1U8E9M2	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG402008350\|UniProtKB=M1AF93	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400021927\|UniProtKB=M1BZF5	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc05g026045.1\|UniProtKB=A0A3Q7GG28	Solanum lycopersicum	O
SOLLC\|EnsemblGenome=Solyc02g021400.2\|UniProtKB=K4B4Z0	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107799618\|UniProtKB=A0A1S4ANZ6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107800747\|UniProtKB=A0A1S4AS05	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi02g01585\|UniProtKB=F6I063	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi08g02367\|UniProtKB=F6HLE9	Vitis vinifera	LDO
CITSI\|Gene_ORFName=CISIN_1g037546mg\|UniProtKB=A0A067EIT4	Citrus sinensis	O
MANES\|EnsemblGenome=MANES_02G076300\|UniProtKB=A0A251JYK2	Manihot esculenta	O
EUCGR\|EnsemblGenome=EUGRSUZ_E00080\|UniProtKB=A0A059C000	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C02P01570.1\|UniProtKB=A0A078ESH8	Brassica napus	LDO
BRANA\|Gene_ORFName=GSBRNA2T00077298001\|UniProtKB=A0A078I3T7	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra028814\|UniProtKB=M4EJ49	Brassica campestris	LDO
ARATH\|TAIR=locus=2164386\|UniProtKB=P34789	Arabidopsis thaliana	LDO
BRANA\|Gene_ORFName=DARMORV10_C09P73080.1\|UniProtKB=A0A078HUL8	Brassica napus	O
BRANA\|EnsemblGenome=GSBRNA2T00136425001\|UniProtKB=A0A078CUQ3	Brassica napus	O
BRACM\|EnsemblGenome=Bra005784\|UniProtKB=M4CZ60	Brassica campestris	O
ARATH\|TAIR=locus=2100118\|UniProtKB=Q9SR73	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107891219\|UniProtKB=A0A1U8I6S0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107935967\|UniProtKB=A0A1U8MES2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_019153\|UniProtKB=A0A061EHP5	Theobroma cacao	O
THECC\|EnsemblGenome=TCM_025036\|UniProtKB=A0A061EXX4	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g035463mg\|UniProtKB=A0A067FTT2	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_008G013200v3\|UniProtKB=A9P8N1	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_016G063100v3\|UniProtKB=A9P8H3	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_08G039200\|UniProtKB=A0A2C9VDD8	Manihot esculenta	LDO
MANES\|EnsemblGenome=MANES_08G039300\|UniProtKB=A0A2C9VD75	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_08G064300\|UniProtKB=A0A2C9VDY5	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0037190\|UniProtKB=B9S469	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_03G205800\|UniProtKB=I1JQD4	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_03G207700\|UniProtKB=C6SZ18	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g081180\|UniProtKB=G7JF15	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_8g089765\|UniProtKB=A0A072TU98	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g013410\|UniProtKB=G7KLE8	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g013210\|UniProtKB=Q2HWC2	Medicago truncatula	LDO
JUGRE\|Gene=LOC108994764\|UniProtKB=A0A2I4F1V5	Juglans regia	O
JUGRE\|Gene=LOC109001764\|UniProtKB=A0A2I4FSS0	Juglans regia	O
JUGRE\|Gene=LOC109013475\|UniProtKB=A0A2I4H4N8	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G166940\|UniProtKB=A0A0A0KW48	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_1G021920\|UniProtKB=A0A0A0LPR2	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G545600\|UniProtKB=A0A251RII9	Prunus persica	LDO
PRUPE\|EnsemblGenome=PRUPE_4G080900\|UniProtKB=Q9ZNS5	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_7G087500\|UniProtKB=A0A251N8R3	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_170205\|UniProtKB=D8RCD2	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c6_27040\|UniProtKB=A0A2K1KHA6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c14_19610\|UniProtKB=A9RXD9	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0004s0156\|UniProtKB=A0A2R6XS12	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002370050\|UniProtKB=A0A1Y1I8K8	Klebsormidium nitens	LDO
NITMS\|EnsemblGenome=Nmar_0226\|UniProtKB=A9A2Z4	Nitrosopumilus maritimus	LDO
KORCO\|EnsemblGenome=Kcr_1018\|UniProtKB=B1L5N5	Korarchaeum cryptofilum	LDO
SACS2\|EnsemblGenome=SSO5479\|UniProtKB=Q980Q5	Sulfolobus solfataricus	LDO
PYRAE\|EnsemblGenome=PAE3344\|UniProtKB=Q8ZTA7	Pyrobaculum aerophilum	LDO
METAC\|EnsemblGenome=MA_1522\|UniProtKB=Q8TQL8	Methanosarcina acetivorans	LDO
METJA\|EnsemblGenome=MJ_1202\|UniProtKB=P54065	Methanocaldococcus jannaschii	LDO
HALSA\|EnsemblGenome=VNG_1158G\|UniProtKB=P57710	Halobacterium salinarum	LDO
THEKO\|EnsemblGenome=TK1310\|UniProtKB=Q5JGR4	Thermococcus kodakaraensis	LDO