PANTHER Gene Information

Gene Symbol(s):

rps28p9

Organism:

Xenopus tropicalis

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Gene Name:

40S ribosomal protein S28

Gene ID:

XB-GENE-1006614

Protein ID:

Q0VGV3

Persistent Id:

PTN008505409

Alternate Ids:

BC080501(EMBL)	Q0VGV3(Synonym)
ENSXETG00000021905(Ensembl)	AAH80501(EMBL-CDS)
NM_001016950(refSeq)	1043436661(GI)
549704(GeneID)	Q0VGV3_XENTR(UniProtKB-ID)
ENSXETT00000047407(Ensembl_TRS)	ENSXETP00000047407(Ensembl_PRO)
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PANTHER Classification

PANTHER Family:	40S RIBOSOMAL PROTEIN S28 (PTHR10769)
PANTHER Subfamily:	SMALL RIBOSOMAL SUBUNIT PROTEIN ES28 (PTHR10769:SF3)
PANTHER GO-slim Molecular Function:	structural constituent of ribosome
PANTHER GO-slim Biological Process:	non-membrane-bounded organelle assembly maturation of SSU-rRNA protein-RNA complex assembly
PANTHER GO-slim Cellular Component:	cytosolic small ribosomal subunit
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	structural constituent of ribosome
GO BP Complete:	maturation of SSU-rRNA, ribosomal small subunit assembly, translation
GO CC Complete:	cytosolic small ribosomal subunit, ribosome

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

GTP hydrolysis and joining of the 60S ribosomal subunit, Metabolism of RNA, Nonsense-Mediated Decay (NMD), Formation of a pool of free 40S subunits, Translation, Eukaryotic Translation Initiation, Metabolism of proteins, SRP-dependent cotranslational protein targeting to membrane, Cap-dependent Translation Initiation, L13a-mediated translational silencing of Ceruloplasmin expression, Ribosomal scanning and start codon recognition, Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC), Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC), Formation of the ternary complex, and subsequently, the 43S complex

Orthologs

ID	Organism	Type
HUMAN\|HGNC=10418\|UniProtKB=P62857	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000040141.2\|UniProtKB=H2RIH6	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000024725.2\|UniProtKB=G3RU06	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000028895.3\|UniProtKB=F7AA98	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1859516\|UniProtKB=P62858	Mus musculus	LDO
RAT\|RGD=11419125\|UniProtKB=F1M168	Rattus norvegicus	O
RAT\|RGD=2323691\|UniProtKB=A0A0A0MY14	Rattus norvegicus	O
RAT\|RGD=11455995\|UniProtKB=A0A8I6APW3	Rattus norvegicus	O
RAT\|RGD=621046\|UniProtKB=P62859	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000002468\|UniProtKB=Q56JX6	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000013597\|UniProtKB=Q6QAT1	Sus scrofa	LDO
FELCA\|Ensembl=ENSFCAG00000040752.1\|UniProtKB=A0A337S9B6	Felis catus	O
FELCA\|Ensembl=ENSFCAG00000024931.3\|UniProtKB=M3X2Q9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845005920.1\|UniProtKB=A0A8I3NCS3	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000025356.2\|UniProtKB=F7E5N0	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000003890.2\|UniProtKB=F7D8M7	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000047078.1\|UniProtKB=A0A6I8PBT4	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010028463.1\|UniProtKB=A0A3Q2U825	Gallus gallus	LDO
XENLA\|Gene=rps28p9.L\|UniProtKB=Q66KP7	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000029846.1\|UniProtKB=A0A3B3H4J8	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-2022\|UniProtKB=Q6PBK3	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002654.1\|UniProtKB=W5M417	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000013272.2\|UniProtKB=F6YMZ5	Ciona intestinalis	LDO
CAEEL\|WormBase=WBGene00004497\|UniProtKB=Q95Y04	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00034328\|UniProtKB=A8XI84	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304588\|UniProtKB=A6YNJ5	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0039739\|UniProtKB=Q9VAB9	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0085211\|UniProtKB=A8DYY3	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0030136\|UniProtKB=Q9W334	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003412\|UniProtKB=Q7QDK2	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC011517\|UniProtKB=D6W6E2	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_128589\|UniProtKB=E9GMY5	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG72007\|UniProtKB=T1G0U0	helobdella robusta	LDO
NEMVE\|Gene_ORFName=NEMVEDRAFT_v1g149719\|UniProtKB=A7T856	Nematostella vectensis	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_28421\|UniProtKB=A9V846	Monosiga brevicollis	LDO
YEAST\|SGD=S000005693\|UniProtKB=Q3E7X9	Saccharomyces cerevisiae	LDO
YEAST\|SGD=S000004254\|UniProtKB=P0C0X0	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AGR261W\|UniProtKB=Q74ZD8	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000196464\|UniProtKB=A0A1D8PQN0	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_C05148g\|UniProtKB=Q6CCZ9	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_06632\|UniProtKB=Q5AYJ8	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_7G04490\|UniProtKB=Q4WGB8	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU05599\|UniProtKB=Q7S6W5	Neurospora crassa	LDO
PHANO\|EnsemblGenome=SNOG_08190\|UniProtKB=Q0UJ74	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC285.15c\|UniProtKB=P0CT80	Schizosaccharomyces pombe	LDO
SCHPO\|PomBase=SPAC25G10.06\|UniProtKB=P0CT79	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02749\|UniProtKB=B6K127	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND06280\|UniProtKB=Q5KHJ3	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_11202\|UniProtKB=A0A0D1D1U9	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_16766\|UniProtKB=E3L2F3	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_12294\|UniProtKB=F4P5K5	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_038860\|UniProtKB=C4LZQ8	Entamoeba histolytica	LDO
ENTH1\|EnsemblGenome=CL6EHI_021450\|UniProtKB=C4M059	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0285597\|UniProtKB=Q54MZ5	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_47614\|UniProtKB=F0ZKE4	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_26_1630\|UniProtKB=Q4Q931	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.7.230\|UniProtKB=Q57U30	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_3570\|UniProtKB=A8B4F3	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_443060\|UniProtKB=A2FIQ8	Trichomonas vaginalis	LDO
TRIV3\|Gene_ORFName=TVAG_050990\|UniProtKB=A2DQN8	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1461300\|UniProtKB=Q8IKL9	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00003033001\|UniProtKB=A0BII3	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_38925\|UniProtKB=B8CGJ9	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G5A1_PHYRM\|UniProtKB=H3G5A1	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g510450v5\|UniProtKB=A0A2K3D2K9	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_185G00610\|UniProtKB=A0A0K9PSQ1	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_14G00950\|UniProtKB=A0A0K9PWG6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g35170\|UniProtKB=A0A804IXE3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g17760\|UniProtKB=M0SR29	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_038573mg\|UniProtKB=K4AI65	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G493001\|UniProtKB=A0A1Z5SBA4	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb396650\|UniProtKB=A0A804R803	Zea mays	LDO
SETIT\|EnsemblGenome=SETIT_039832mg\|UniProtKB=K4ALQ0	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G402050\|UniProtKB=A0A1Z5SAA0	Sorghum bicolor	LDO
MAIZE\|Gene=RPS28\|UniProtKB=P46302	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb005140\|UniProtKB=B4FW18	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os10g0411700\|UniProtKB=A0A0P0XU17	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g00500v3\|UniProtKB=I1HW13	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G530400\|UniProtKB=W5E8X2	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_001225\|UniProtKB=A0A1U8Q3P8	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_025420\|UniProtKB=A0A1U7Z3S2	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110794368\|UniProtKB=A0A0K9RBJ3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0808761\|UniProtKB=A0A251RR89	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr12g0554101\|UniProtKB=A0A251T3U7	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr09g0361941\|UniProtKB=A0A251TRR5	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0820921\|UniProtKB=A0A251RT10	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0686311\|UniProtKB=A0A251S767	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr07g0306601\|UniProtKB=A0A9K3NGM6	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr10g0423311\|UniProtKB=A0A9K3HV08	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr11g0483711\|UniProtKB=A0A9K3HMW3	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0686301\|UniProtKB=A0A251TVC8	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300142820\|UniProtKB=A0A9R1W3Z4	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a017613mg\|UniProtKB=A0A022QJY6	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a017586mg\|UniProtKB=A0A022QIU3	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_26443\|UniProtKB=A0A2G2YNK0	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_32756\|UniProtKB=A0A1U8E9M2	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG402008350\|UniProtKB=M1AF93	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400021927\|UniProtKB=M1BZF5	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc05g026045.1\|UniProtKB=A0A3Q7GG28	Solanum lycopersicum	O
SOLLC\|EnsemblGenome=Solyc02g021400.2\|UniProtKB=K4B4Z0	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107799618\|UniProtKB=A0A1S4ANZ6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107800747\|UniProtKB=A0A1S4AS05	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi02g01585\|UniProtKB=F6I063	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi08g02367\|UniProtKB=F6HLE9	Vitis vinifera	LDO
CITSI\|Gene_ORFName=CISIN_1g037546mg\|UniProtKB=A0A067EIT4	Citrus sinensis	O
MANES\|EnsemblGenome=MANES_02G076300\|UniProtKB=A0A251JYK2	Manihot esculenta	O
EUCGR\|EnsemblGenome=EUGRSUZ_E00080\|UniProtKB=A0A059C000	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C02P01570.1\|UniProtKB=A0A078ESH8	Brassica napus	LDO
BRANA\|Gene_ORFName=GSBRNA2T00077298001\|UniProtKB=A0A078I3T7	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra028814\|UniProtKB=M4EJ49	Brassica campestris	LDO
ARATH\|TAIR=locus=2164386\|UniProtKB=P34789	Arabidopsis thaliana	LDO
BRANA\|Gene_ORFName=DARMORV10_C09P73080.1\|UniProtKB=A0A078HUL8	Brassica napus	O
BRANA\|EnsemblGenome=GSBRNA2T00136425001\|UniProtKB=A0A078CUQ3	Brassica napus	O
BRACM\|EnsemblGenome=Bra005784\|UniProtKB=M4CZ60	Brassica campestris	O
ARATH\|TAIR=locus=2100118\|UniProtKB=Q9SR73	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107891219\|UniProtKB=A0A1U8I6S0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107935967\|UniProtKB=A0A1U8MES2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_019153\|UniProtKB=A0A061EHP5	Theobroma cacao	O
THECC\|EnsemblGenome=TCM_025036\|UniProtKB=A0A061EXX4	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g035463mg\|UniProtKB=A0A067FTT2	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_008G013200v3\|UniProtKB=A9P8N1	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_016G063100v3\|UniProtKB=A9P8H3	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_08G039200\|UniProtKB=A0A2C9VDD8	Manihot esculenta	LDO
MANES\|EnsemblGenome=MANES_08G039300\|UniProtKB=A0A2C9VD75	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_08G064300\|UniProtKB=A0A2C9VDY5	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0037190\|UniProtKB=B9S469	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_03G205800\|UniProtKB=I1JQD4	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_03G207700\|UniProtKB=C6SZ18	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g081180\|UniProtKB=G7JF15	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_8g089765\|UniProtKB=A0A072TU98	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g013410\|UniProtKB=G7KLE8	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g013210\|UniProtKB=Q2HWC2	Medicago truncatula	LDO
JUGRE\|Gene=LOC108994764\|UniProtKB=A0A2I4F1V5	Juglans regia	O
JUGRE\|Gene=LOC109001764\|UniProtKB=A0A2I4FSS0	Juglans regia	O
JUGRE\|Gene=LOC109013475\|UniProtKB=A0A2I4H4N8	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G166940\|UniProtKB=A0A0A0KW48	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_1G021920\|UniProtKB=A0A0A0LPR2	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G545600\|UniProtKB=A0A251RII9	Prunus persica	LDO
PRUPE\|EnsemblGenome=PRUPE_4G080900\|UniProtKB=Q9ZNS5	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_7G087500\|UniProtKB=A0A251N8R3	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_170205\|UniProtKB=D8RCD2	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c6_27040\|UniProtKB=A0A2K1KHA6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c14_19610\|UniProtKB=A9RXD9	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0004s0156\|UniProtKB=A0A2R6XS12	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002370050\|UniProtKB=A0A1Y1I8K8	Klebsormidium nitens	LDO
NITMS\|EnsemblGenome=Nmar_0226\|UniProtKB=A9A2Z4	Nitrosopumilus maritimus	LDO
KORCO\|EnsemblGenome=Kcr_1018\|UniProtKB=B1L5N5	Korarchaeum cryptofilum	LDO
SACS2\|EnsemblGenome=SSO5479\|UniProtKB=Q980Q5	Sulfolobus solfataricus	LDO
PYRAE\|EnsemblGenome=PAE3344\|UniProtKB=Q8ZTA7	Pyrobaculum aerophilum	LDO
METAC\|EnsemblGenome=MA_1522\|UniProtKB=Q8TQL8	Methanosarcina acetivorans	LDO
METJA\|EnsemblGenome=MJ_1202\|UniProtKB=P54065	Methanocaldococcus jannaschii	LDO
HALSA\|EnsemblGenome=VNG_1158G\|UniProtKB=P57710	Halobacterium salinarum	LDO
THEKO\|EnsemblGenome=TK1310\|UniProtKB=Q5JGR4	Thermococcus kodakaraensis	LDO