PANTHER Gene Information

Gene Symbol(s):

pdlim4

Organism:

Danio rerio

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Gene Name:

PDZ and LIM domain 4

Gene ID:

ZDB-GENE-070308-5

Protein ID:

Q0PWB9

Persistent Id:

PTN000655194

Alternate Ids:

AAI33975(EMBL-CDS)	111607494(GI)
ENSDART00000099978(Ensembl_TRS)	ENSDARG00000068973(Ensembl)
BC133974(EMBL)	Q0PWB9(Synonym)
NP_001036161(refSeq)	Q0PWB9_DANRE(UniProtKB-ID)
ENSDARP00000090750(Ensembl_PRO)	ZDB-GENE-070308-5(ZFIN)
569404(GeneID)
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PANTHER Classification

PANTHER Family:	PDZ AND LIM DOMAIN PROTEIN ZASP (PTHR24214)
PANTHER Subfamily:	PDZ AND LIM DOMAIN PROTEIN 4 (PTHR24214:SF6)
PANTHER GO-slim Molecular Function:	actin binding
PANTHER GO-slim Biological Process:	actin cytoskeleton organization muscle structure development heart development
PANTHER GO-slim Cellular Component:	stress fiber protein-containing complex actin filament adherens junction Z disc
PANTHER protein class:	actin or actin-binding cytoskeletal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	actin binding, metal ion binding, muscle alpha-actinin binding
GO BP Complete:	heart development, muscle structure development, actin cytoskeleton organization
GO CC Complete:	early endosome membrane, Z disc, adherens junction, endosome, perinuclear region of cytoplasm, stress fiber, synapse, recycling endosome membrane, filamentous actin, lamellipodium

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=16501\|UniProtKB=P50479	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000017214.6\|UniProtKB=H2QRG2	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000010415.3\|UniProtKB=G3R4F9	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000009298.4\|UniProtKB=F7H1G7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1353470\|UniProtKB=P70271	Mus musculus	LDO
RAT\|RGD=3575\|UniProtKB=P36202	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000015426\|UniProtKB=Q3T005	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000014274.5\|UniProtKB=F1RJV5	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000024273.4\|UniProtKB=A0A3Q2H7C0	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000014015.5\|UniProtKB=M3WJX3	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845010145.1\|UniProtKB=A0A8I3NCL1	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000013984.4\|UniProtKB=F6QL09	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000040872.1\|UniProtKB=A0A6I8P217	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010016266\|UniProtKB=Q9PW72	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000027479.3\|UniProtKB=G1KY84	Anolis carolinensis	LDO
XENLA\|Gene=pdlim4.S\|UniProtKB=A0A1L8GVB1	Xenopus laevis	O
XENLA\|Gene=pdlim4.L\|UniProtKB=Q498K2	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1001790\|UniProtKB=Q6P3Q7	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000019075.2\|UniProtKB=H2MXV4	Oryzias latipes	LDO
LEPOC\|Ensembl=ENSLOCG00000010368.1\|UniProtKB=W5MWE7	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118408732\|UniProtKB=A0A9J7HVY3	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC592242\|UniProtKB=A0A7M7NE14	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC585685\|UniProtKB=A0A7M7NES0	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00014262\|UniProtKB=G5EDL9	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00024328\|UniProtKB=A8WP20	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00001132\|UniProtKB=G5EFL5	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG24239\|UniProtKB=A8WKA2	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00101087\|UniProtKB=A0A2A6BI24	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0035917\|UniProtKB=Q8IQB4	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP006260\|UniProtKB=A7UU64	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC014041\|UniProtKB=D6WJK4	Tribolium castaneum	O
DROME\|FlyBase=FBgn0259219\|UniProtKB=B7YZE5	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0036044\|UniProtKB=Q9VT49	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0265991\|UniProtKB=A1ZA47	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP003938\|UniProtKB=Q7Q2A8	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP003939\|UniProtKB=Q7PML1	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP003937\|UniProtKB=F5HM25	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP006901\|UniProtKB=Q7PTE3	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC010422\|UniProtKB=A0A139WI59	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC033206\|UniProtKB=A0A139WH76	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_113993\|UniProtKB=E9HGQ6	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW000210\|UniProtKB=B7P6T6	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW022782\|UniProtKB=B7QCQ7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG192354\|UniProtKB=T1FTU8	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG191117\|UniProtKB=T1FSL8	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG190914\|UniProtKB=T1FSE9	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g245123\|UniProtKB=A7SGH9	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_25404\|UniProtKB=A9UZB5	Monosiga brevicollis	O