PANTHER Gene Information

Gene Symbol(s):

rargb

Organism:

Danio rerio

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Gene Name:

Retinoic acid receptor gamma-B

Gene ID:

ZDB-GENE-070314-1

Protein ID:

A2T928

Persistent Id:

PTN001182196

Alternate Ids:

133922573(GI)	nr1b3b(Synonym)
RARGB_DANRE(UniProtKB-ID)	NP_001076779(refSeq)
ZDB-GENE-070314-1(ZFIN)	100034753(GeneID)
ABM89228(EMBL-CDS)	rargb{ECO:0000312\|EMBL:ABM89228.1}(Symbol)
EF028131(EMBL)
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PANTHER Classification

PANTHER Family:	NUCLEAR HORMONE RECEPTOR (PTHR24082)
PANTHER Subfamily:	RETINOIC ACID RECEPTOR GAMMA (PTHR24082:SF116)
PANTHER GO-slim Molecular Function:	RNA polymerase II cis-regulatory region sequence-specific DNA binding signaling receptor activity DNA-binding transcription factor activity, RNA polymerase II-specific
PANTHER GO-slim Biological Process:	negative regulation of transcription by RNA polymerase II cell differentiation hormone-mediated signaling pathway intracellular receptor signaling pathway positive regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:
PANTHER protein class:	C4 zinc finger nuclear receptor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, DNA-binding transcription factor activity, zinc ion binding, nuclear receptor activity, metal ion binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding, sequence-specific DNA binding
GO BP Complete:	negative regulation of transcription by RNA polymerase II, negative regulation of BMP signaling pathway, retinoic acid receptor signaling pathway, determination of heart left/right asymmetry, determination of digestive tract left/right asymmetry, determination of left/right asymmetry in lateral mesoderm, cell differentiation, regulation of DNA-templated transcription, positive regulation of transcription by RNA polymerase II, intrahepatic bile duct development, determination of liver left/right asymmetry, determination of pancreatic left/right asymmetry
GO CC Complete:	nucleus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=9866\|UniProtKB=P13631	Homo sapiens	O
MACMU\|Ensembl=ENSMMUG00000022017.4\|UniProtKB=F7FAT5	Macaca mulatta	O
MOUSE\|MGI=MGI=97858\|UniProtKB=P18911	Mus musculus	O
RAT\|RGD=1583230\|UniProtKB=D3ZF61	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000007592.5\|UniProtKB=Q08DD4	Bos taurus	O
FELCA\|Ensembl=ENSFCAG00000005870.6\|UniProtKB=A0A337SWD3	Felis catus	O
ORNAN\|Ensembl=ENSOANG00000012236.3\|UniProtKB=A0A6I8PHC3	Ornithorhynchus anatinus	O
CIOIN\|Ensembl=ENSCING00000006945.3\|UniProtKB=F6VND6	Ciona intestinalis	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_116859\|UniProtKB=Q8MX80	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC584535\|UniProtKB=A0A7M7N2J7	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00003601\|UniProtKB=Q10902	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG04060\|UniProtKB=A8WW43	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00003606\|UniProtKB=Q20765	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00028390\|UniProtKB=A8X108	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00004786\|UniProtKB=P41830	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00038735\|UniProtKB=A8XVU5	Caenorhabditis briggsae	O
CAEBR\|Gene_ORFName=CBG19536\|UniProtKB=A8XVU6	Caenorhabditis briggsae	O
CAEBR\|Gene_ORFName=CBG17178\|UniProtKB=A8XQM1	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00003675\|UniProtKB=Q9XUK7	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG13679\|UniProtKB=A8XIG9	Caenorhabditis briggsae	O
CAEBR\|WormBase=WBGene00029816\|UniProtKB=A8X5D8	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00272173\|UniProtKB=A0A2A6BTX7	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0000568\|UniProtKB=P13055	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP029560\|UniProtKB=A0A453Z0D2	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC003935\|UniProtKB=D6WHQ0	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC031236\|UniProtKB=A0A139WCF5	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_205205\|UniProtKB=E9FSB9	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW020016\|UniProtKB=B7Q233	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG81466\|UniProtKB=T1G4E6	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG67484\|UniProtKB=T1FZ14	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG67463\|UniProtKB=T1FZ12	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g108851\|UniProtKB=A7S8G8	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g101676\|UniProtKB=A7S286	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g152310\|UniProtKB=A7TAF5	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g149683\|UniProtKB=A7T846	Nematostella vectensis	O