PANTHER Gene Information

Gene Symbol(s):

LOC107888808

Organism:

Gossypium hirsutum

View Gene in Tree

Tree

Gene Name:

SWI_SNF complex component SNF12 homolog

Gene ID:

LOC107888808

Protein ID:

A0A1U8HR59

Persistent Id:

PTN004443603

Alternate Ids:

XP_016668527(refSeq)	A0A1U8HR59(Synonym)
A0A1U8HR59_GOSHI(UniProtKB-ID)	107888808(GeneID)
1029009292(GI)
Show All

PANTHER Classification

PANTHER Family:	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D (PTHR13844)
PANTHER Subfamily:	SWI_SNF COMPLEX COMPONENT SNF12 HOMOLOG (PTHR13844:SF86)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	SWI/SNF complex
PANTHER protein class:	chromatin/chromatin-binding, or -regulatory protein

Pathway Categories:

Wnt signaling pathway

Switched/Sucrose Non Fermentation

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus, SWI/SNF complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=11108\|UniProtKB=Q6STE5	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000019882.6\|UniProtKB=H2QVN0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000001089.3\|UniProtKB=G3QFJ9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000006687.4\|UniProtKB=A0A5F7ZZL8	Macaca mulatta	O
MOUSE\|MGI=MGI=1914243\|UniProtKB=Q6P9Z1	Mus musculus	O
RAT\|RGD=1311869\|UniProtKB=A0A8I5ZQQ2	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000014372.6\|UniProtKB=Q0II51	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000016435.5\|UniProtKB=F1SSN0	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000017544.4\|UniProtKB=A0A9L0RJN5	Equus caballus	O
HORSE\|Ensembl=ENSECAG00000017544.4\|UniProtKB=A0A9L0RJN5	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000013208.6\|UniProtKB=A0A337SWI9	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845010900.1\|UniProtKB=A0A8I3RW50	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000004451.4\|UniProtKB=F6R7T1	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000038018.1\|UniProtKB=A0A6I8NAV6	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010025426.1\|UniProtKB=A0A8V1A7Q4	Gallus gallus	O
XENLA\|Gene=LOC108695582\|UniProtKB=A0A8J1L576	Xenopus laevis	O
XENLA\|Gene=LOC108704644\|UniProtKB=A0A8J1KY08	Xenopus laevis	O
ORYLA\|Ensembl=ENSORLG00000011768.2\|UniProtKB=A0A3B3HWM3	Oryzias latipes	O
DANRE\|Gene=smarcd3a\|UniProtKB=A0A8M2BAQ8	Danio rerio	O
DANRE\|Gene=smarcd3b\|UniProtKB=A0A8M9Q1P6	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000009069.1\|UniProtKB=W5MRQ1	lepisosteus oculatus	O
HUMAN\|HGNC=11107\|UniProtKB=Q92925	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000009526.7\|UniProtKB=H2QDN6	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000006814.3\|UniProtKB=G3RMF2	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000016771.4\|UniProtKB=A0A1D5QLY7	Macaca mulatta	O
MOUSE\|MGI=MGI=1933621\|UniProtKB=Q99JR8	Mus musculus	O
RAT\|RGD=69289\|UniProtKB=O54772	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000021062\|UniProtKB=E1BJD1	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000041822.2\|UniProtKB=A0A5G2RC75	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000011370.4\|UniProtKB=F7BEP7	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000003502.5\|UniProtKB=A0A337SA99	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845020972.1\|UniProtKB=A0A8I3PES9	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000009857.4\|UniProtKB=F7A4E9	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000006178.4\|UniProtKB=F7AZ61	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010026277.1\|UniProtKB=A0A8V1A5P7	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000017920.3\|UniProtKB=G1KUI3	Anolis carolinensis	O
XENLA\|Gene=smarcd2.L\|UniProtKB=A0A1L8ESL3	Xenopus laevis	O
XENLA\|Gene=smarcd3.S\|UniProtKB=A0A1L8EL76	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-489103\|UniProtKB=Q28BL9	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000005467.2\|UniProtKB=H2LLH2	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-080215-1\|UniProtKB=E7EYW7	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000012004.1\|UniProtKB=W5N2B2	lepisosteus oculatus	O
HUMAN\|HGNC=11106\|UniProtKB=Q96GM5	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000004924.5\|UniProtKB=A0A2I3S359	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000013355.3\|UniProtKB=A0A2I2YKF8	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000006531.4\|UniProtKB=F7HTX9	Macaca mulatta	O
MOUSE\|MGI=MGI=1933623\|UniProtKB=Q61466	Mus musculus	O
RAT\|RGD=1305406\|UniProtKB=D3ZBS9	Rattus norvegicus	O
BOVIN\|Gene=SMARCD1\|UniProtKB=Q2TBN1	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000037935.2\|UniProtKB=F1MTG9	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000000215.5\|UniProtKB=A0A287BKY7	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000021885.4\|UniProtKB=F6X8K1	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000009461.5\|UniProtKB=A0A2I2UTR2	Felis catus	O
ORNAN\|Ensembl=ENSOANG00000038365.1\|UniProtKB=A0A6I8PCZ5	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010023184.1\|UniProtKB=A0A1D5PSH3	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000017038.3\|UniProtKB=G1KTG9	Anolis carolinensis	O
XENLA\|Gene=smarcd1.S\|UniProtKB=A0A1L8HA93	Xenopus laevis	O
XENLA\|Gene=smarcd1.L\|UniProtKB=A1A5J8	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-491104\|UniProtKB=Q6GL18	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000006870.2\|UniProtKB=H2LRD3	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030131-1835\|UniProtKB=Q802C8	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000005337.1\|UniProtKB=W5MDH3	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000013288.2\|UniProtKB=F6UK15	Ciona intestinalis	O
BRAFL\|Gene=LOC118415539\|UniProtKB=A0A9J7MR35	Branchiostoma floridae	O
BRAFL\|Gene=LOC118424259\|UniProtKB=A0A9J7N420	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC115918329\|UniProtKB=A0A7M7T0X2	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00015971\|UniProtKB=O02101	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG12176\|UniProtKB=A8XF24	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00044072\|UniProtKB=Q09646	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00031387\|UniProtKB=A8X9V3	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00115103\|UniProtKB=A0A2A6BQI7	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0025463\|UniProtKB=Q9VYG2	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP000923\|UniProtKB=Q7QI39	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP005336\|UniProtKB=Q7Q7F6	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC012873\|UniProtKB=D6X1C7	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_130021\|UniProtKB=E9HFR4	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW019453\|UniProtKB=B7PRT9	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG67796\|UniProtKB=T1FZ54	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g200763\|UniProtKB=A7RQW4	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g149197\|UniProtKB=A7T7Q2	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_38471\|UniProtKB=A9V808	Monosiga brevicollis	O
YARLI\|EnsemblGenome=YALI0_D25344g\|UniProtKB=Q6C7U2	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_10524\|UniProtKB=C8V4A6	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_1G06310\|UniProtKB=Q4WJE0	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU03572\|UniProtKB=Q7RWI8	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_13521\|UniProtKB=A7F7E1	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_06332\|UniProtKB=Q0UPI2	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC23G3.10c\|UniProtKB=Q9P7S3	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00739\|UniProtKB=B6JWG3	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNG02900\|UniProtKB=Q5KDS9	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_02958\|UniProtKB=A0A0D1DXZ0	Ustilago maydis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_85559\|UniProtKB=F4NT42	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0273203\|UniProtKB=Q556Z0	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_83174\|UniProtKB=F0ZYR8	Dictyostelium purpureum	O
PARTE\|EnsemblGenome=GSPATT00010157001\|UniProtKB=A0CSW8	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00004196001\|UniProtKB=A0EDG0	Paramecium tetraurelia	O
CHLRE\|EnsemblGenome=CHLRE_10g448700v5\|UniProtKB=A8HZJ8	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00013p00219800\|UniProtKB=W1PQ93	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_77G00820\|UniProtKB=A0A0K9NR12	Zostera marina	O
MUSAM\|EnsemblGenome=Ma09_g01500\|UniProtKB=A0A804KES3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma06_g22070\|UniProtKB=A0A804JJ16	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_009789mg\|UniProtKB=K3Y6E8	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_016863mg\|UniProtKB=K3YRG9	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G394800\|UniProtKB=A0A1B6QFW1	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb329130\|UniProtKB=A0A1D6IL43	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb377890\|UniProtKB=A0A804R1G6	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb110350\|UniProtKB=A0A1D6F2G1	Zea mays	O
ORYSJ\|EnsemblGenome=Os04g0382100\|UniProtKB=Q0JDR8	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_5g07730v3\|UniProtKB=I1IX10	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0161670\|UniProtKB=A0A8I6WNU6	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2B02G298800\|UniProtKB=A0A3B6C8X5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G280300\|UniProtKB=A0A1D5UT08	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G281500\|UniProtKB=A0A3B6AZ03	Triticum aestivum	O
NELNU\|Gene=LOC104592908\|UniProtKB=A0A1U7ZRC8	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_008516\|UniProtKB=A0A1U7YVW6	Nelumbo nucifera	O
SPIOL\|Gene=LOC110783308\|UniProtKB=A0A9R0JQG1	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr02g0050311\|UniProtKB=A0A251VE24	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100012220\|UniProtKB=A0A9R1WP42	Lactuca sativa	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0654611\|UniProtKB=A0A251SN16	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0387841\|UniProtKB=A0A9K3I5T3	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200084720\|UniProtKB=A0A9R1XVH7	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C400228260\|UniProtKB=A0A9R1VXD2	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a004129mg\|UniProtKB=A0A022RZH1	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_04843\|UniProtKB=A0A2G3A6B4	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_04841\|UniProtKB=A0A2G3A681	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400006925\|UniProtKB=M1A9J6	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc02g068100.3\|UniProtKB=A0A3Q7FM30	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107799431\|UniProtKB=A0A1S4AN38	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107816546\|UniProtKB=A0A1S4C9E2	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi14g01554\|UniProtKB=F6H3Y6	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J02334\|UniProtKB=A0A059AHA8	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00023582001\|UniProtKB=A0A078J3I8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra006242\|UniProtKB=M4CPV3	Brassica campestris	LDO
ARATH\|TAIR=locus=2078713\|UniProtKB=Q147F4	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2174638\|UniProtKB=Q9FMT4	Arabidopsis thaliana	LDO
THECC\|EnsemblGenome=TCM_017181\|UniProtKB=A0A061ECY9	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g008555mg\|UniProtKB=A0A067EFI7	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g009056mg\|UniProtKB=A0A067FKG9	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_017G069300v3\|UniProtKB=A0A2K1X4B8	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G331400v3\|UniProtKB=B9GJS7	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_15G141800\|UniProtKB=A0A2C9UG01	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_17G092700\|UniProtKB=A0A251IW22	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0774970\|UniProtKB=B9S7A2	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_06G170800\|UniProtKB=I1KC40	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G195200\|UniProtKB=K7KL60	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g089140\|UniProtKB=G7J5J5	Medicago truncatula	O
SOYBN\|EnsemblGenome=GLYMA_19G071500\|UniProtKB=I1N798	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_16G057200\|UniProtKB=A0A0R0FLV6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G090700\|UniProtKB=K7MXF1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_05G077800\|UniProtKB=K7KP05	Glycine max	O
MEDTR\|EnsemblGenome=MTR_6g023835\|UniProtKB=A0A072UI25	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr01_06520\|UniProtKB=A0A2I4HVJ8	Juglans regia	O
JUGRE\|EnsemblGenome=Jr10_04600\|UniProtKB=A0A2I4H592	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_7G064600\|UniProtKB=A0A0A0K244	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_3G585900\|UniProtKB=A0A0A0LB48	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G305400\|UniProtKB=M5WSF0	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_43289\|UniProtKB=D8T2I9	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c3_28590\|UniProtKB=A0A2K1KWG6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_6950\|UniProtKB=A0A2K1K6F4	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_3810\|UniProtKB=A9TNJ5	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0119s0058\|UniProtKB=A0A2R6WAJ5	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_007050030\|UniProtKB=A0A1Y1ILD1	Klebsormidium nitens	O