PANTHER Gene Information

Gene Symbol(s):

Smarcd2

Organism:

Rattus norvegicus

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Gene Name:

SWI_SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2

Gene ID:

69289

Protein ID:

O54772

Persistent Id:

PTN000353936

Alternate Ids:

BC062063(EMBL)	60 kDa BRG-1/Brm-associated factor subunit B(Synonym)
57013018(GI)	NP_114189(refSeq)
Smarcd2(Symbol)	BAA24105(EMBL-CDS)
O54771(AltAccession)	SMRD2_RAT(UniProtKB-ID)
69289(RGD)	83833(GeneID)
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PANTHER Classification

PANTHER Family:	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D (PTHR13844)
PANTHER Subfamily:	SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D MEMBER 2 (PTHR13844:SF2)
PANTHER GO-slim Molecular Function:	transcription coregulator activity
PANTHER GO-slim Biological Process:	regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	SWI/SNF complex
PANTHER protein class:	chromatin/chromatin-binding, or -regulatory protein

Pathway Categories:

Wnt signaling pathway

Switched/Sucrose Non Fermentation

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	transcription coregulator activity
GO BP Complete:	biological_process, chromatin remodeling, nucleosome disassembly, regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus, SWI/SNF complex, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Transcriptional regulation by RUNX1, RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known, Generic Transcription Pathway, RMTs methylate histone arginines, Chromatin modifying enzymes, Gene expression (Transcription), Chromatin organization, RNA Polymerase II Transcription

Orthologs

ID	Organism	Type
HUMAN\|HGNC=11107\|UniProtKB=Q92925	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000009526.7\|UniProtKB=H2QDN6	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000006814.3\|UniProtKB=G3RMF2	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000016771.4\|UniProtKB=A0A1D5QLY7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1933621\|UniProtKB=Q99JR8	Mus musculus	LDO
BOVIN\|Ensembl=ENSBTAG00000021062\|UniProtKB=E1BJD1	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000041822.2\|UniProtKB=A0A5G2RC75	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000011370.4\|UniProtKB=F7BEP7	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000003502.5\|UniProtKB=A0A337SA99	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845020972.1\|UniProtKB=A0A8I3PES9	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000009857.4\|UniProtKB=F7A4E9	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000006178.4\|UniProtKB=F7AZ61	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010026277.1\|UniProtKB=A0A8V1A5P7	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000017920.3\|UniProtKB=G1KUI3	Anolis carolinensis	LDO
XENLA\|Gene=smarcd2.L\|UniProtKB=A0A1L8ESL3	Xenopus laevis	O
XENLA\|Gene=smarcd3.S\|UniProtKB=A0A1L8EL76	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-489103\|UniProtKB=Q28BL9	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000005467.2\|UniProtKB=H2LLH2	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-080215-1\|UniProtKB=E7EYW7	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000012004.1\|UniProtKB=W5N2B2	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000013288.2\|UniProtKB=F6UK15	Ciona intestinalis	O
BRAFL\|Gene=LOC118415539\|UniProtKB=A0A9J7MR35	Branchiostoma floridae	O
BRAFL\|Gene=LOC118424259\|UniProtKB=A0A9J7N420	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC115918329\|UniProtKB=A0A7M7T0X2	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00015971\|UniProtKB=O02101	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG12176\|UniProtKB=A8XF24	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00044072\|UniProtKB=Q09646	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00031387\|UniProtKB=A8X9V3	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00115103\|UniProtKB=A0A2A6BQI7	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0025463\|UniProtKB=Q9VYG2	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP000923\|UniProtKB=Q7QI39	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP005336\|UniProtKB=Q7Q7F6	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC012873\|UniProtKB=D6X1C7	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_130021\|UniProtKB=E9HFR4	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW019453\|UniProtKB=B7PRT9	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG67796\|UniProtKB=T1FZ54	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g200763\|UniProtKB=A7RQW4	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g149197\|UniProtKB=A7T7Q2	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_38471\|UniProtKB=A9V808	Monosiga brevicollis	O
YARLI\|EnsemblGenome=YALI0_D25344g\|UniProtKB=Q6C7U2	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_10524\|UniProtKB=C8V4A6	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_1G06310\|UniProtKB=Q4WJE0	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU03572\|UniProtKB=Q7RWI8	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_13521\|UniProtKB=A7F7E1	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_06332\|UniProtKB=Q0UPI2	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC23G3.10c\|UniProtKB=Q9P7S3	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00739\|UniProtKB=B6JWG3	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNG02900\|UniProtKB=Q5KDS9	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_02958\|UniProtKB=A0A0D1DXZ0	Ustilago maydis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_85559\|UniProtKB=F4NT42	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0273203\|UniProtKB=Q556Z0	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_83174\|UniProtKB=F0ZYR8	Dictyostelium purpureum	O
PARTE\|EnsemblGenome=GSPATT00010157001\|UniProtKB=A0CSW8	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00004196001\|UniProtKB=A0EDG0	Paramecium tetraurelia	O
CHLRE\|EnsemblGenome=CHLRE_10g448700v5\|UniProtKB=A8HZJ8	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00013p00219800\|UniProtKB=W1PQ93	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_77G00820\|UniProtKB=A0A0K9NR12	Zostera marina	O
MUSAM\|EnsemblGenome=Ma09_g01500\|UniProtKB=A0A804KES3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma06_g22070\|UniProtKB=A0A804JJ16	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_009789mg\|UniProtKB=K3Y6E8	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_016863mg\|UniProtKB=K3YRG9	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G394800\|UniProtKB=A0A1B6QFW1	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb329130\|UniProtKB=A0A1D6IL43	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb377890\|UniProtKB=A0A804R1G6	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb110350\|UniProtKB=A0A1D6F2G1	Zea mays	O
ORYSJ\|EnsemblGenome=Os04g0382100\|UniProtKB=Q0JDR8	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_5g07730v3\|UniProtKB=I1IX10	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0161670\|UniProtKB=A0A8I6WNU6	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2B02G298800\|UniProtKB=A0A3B6C8X5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G280300\|UniProtKB=A0A1D5UT08	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G281500\|UniProtKB=A0A3B6AZ03	Triticum aestivum	O
NELNU\|Gene=LOC104592908\|UniProtKB=A0A1U7ZRC8	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_008516\|UniProtKB=A0A1U7YVW6	Nelumbo nucifera	O
SPIOL\|Gene=LOC110787296\|UniProtKB=A0A9R0IEA5	Spinacia oleracea	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a004252mg\|UniProtKB=A0A022Q583	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_10057\|UniProtKB=A0A2G3A178	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG403015244\|UniProtKB=M1B898	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g111250.3\|UniProtKB=A0A3Q7FPC3	Solanum lycopersicum	O
TOBAC\|Gene=LOC107797351\|UniProtKB=A0A1S4AG88	Nicotiana tabacum	O
TOBAC\|Gene=LOC107767989\|UniProtKB=A0A1S3XSC1	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi17g00120\|UniProtKB=D7SGX5	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_I00514\|UniProtKB=A0A059ALC1	Eucalyptus grandis	O
POPTR\|EnsemblGenome=POPTR_015G094500v3\|UniProtKB=B9IFA0	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_012G096700v3\|UniProtKB=B9I3Q3	Populus trichocarpa	O
RICCO\|Gene_ORFName=RCOM_1506520\|UniProtKB=B9RAH2	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_17G129500\|UniProtKB=I1MUP5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_05G047600\|UniProtKB=I1K0A7	Glycine max	O
MEDTR\|EnsemblGenome=MTR_4g103600\|UniProtKB=G7JLF1	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr09_04920\|UniProtKB=A0A2I4F077	Juglans regia	O
PRUPE\|EnsemblGenome=PRUPE_5G152300\|UniProtKB=M5WCP9	Prunus persica	O
SPIOL\|Gene=LOC110783308\|UniProtKB=A0A9R0JQG1	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr02g0050311\|UniProtKB=A0A251VE24	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100012220\|UniProtKB=A0A9R1WP42	Lactuca sativa	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0654611\|UniProtKB=A0A251SN16	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0387841\|UniProtKB=A0A9K3I5T3	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C200084720\|UniProtKB=A0A9R1XVH7	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C400228260\|UniProtKB=A0A9R1VXD2	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a004129mg\|UniProtKB=A0A022RZH1	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_04843\|UniProtKB=A0A2G3A6B4	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_04841\|UniProtKB=A0A2G3A681	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400006925\|UniProtKB=M1A9J6	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc02g068100.3\|UniProtKB=A0A3Q7FM30	Solanum lycopersicum	O
TOBAC\|Gene=LOC107799431\|UniProtKB=A0A1S4AN38	Nicotiana tabacum	O
TOBAC\|Gene=LOC107816546\|UniProtKB=A0A1S4C9E2	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi14g01554\|UniProtKB=F6H3Y6	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_J02334\|UniProtKB=A0A059AHA8	Eucalyptus grandis	O
BRANA\|Gene_ORFName=GSBRNA2T00023582001\|UniProtKB=A0A078J3I8	Brassica napus	O
BRACM\|EnsemblGenome=Bra006242\|UniProtKB=M4CPV3	Brassica campestris	O
ARATH\|TAIR=locus=2078713\|UniProtKB=Q147F4	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2174638\|UniProtKB=Q9FMT4	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107913417\|UniProtKB=A0A1U8K4P1	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_014625\|UniProtKB=A0A061FZX1	Theobroma cacao	O
GOSHI\|Gene=LOC107914203\|UniProtKB=A0A1U8KC24	Gossypium hirsutum	O
GOSHI\|Gene=LOC107888808\|UniProtKB=A0A1U8HR59	Gossypium hirsutum	O
GOSHI\|Gene=LOC107904814\|UniProtKB=A0A1U8JDL6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107926482\|UniProtKB=A0A1U8LHF4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107892165\|UniProtKB=A0A1U8I347	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_017181\|UniProtKB=A0A061ECY9	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g008555mg\|UniProtKB=A0A067EFI7	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g009056mg\|UniProtKB=A0A067FKG9	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_017G069300v3\|UniProtKB=A0A2K1X4B8	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G331400v3\|UniProtKB=B9GJS7	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_15G141800\|UniProtKB=A0A2C9UG01	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_17G092700\|UniProtKB=A0A251IW22	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0774970\|UniProtKB=B9S7A2	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_06G170800\|UniProtKB=I1KC40	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G195200\|UniProtKB=K7KL60	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g089140\|UniProtKB=G7J5J5	Medicago truncatula	O
SOYBN\|EnsemblGenome=GLYMA_19G071500\|UniProtKB=I1N798	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G057200\|UniProtKB=A0A0R0FLV6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G090700\|UniProtKB=K7MXF1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_05G077800\|UniProtKB=K7KP05	Glycine max	O
MEDTR\|EnsemblGenome=MTR_6g023835\|UniProtKB=A0A072UI25	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr01_06520\|UniProtKB=A0A2I4HVJ8	Juglans regia	O
JUGRE\|EnsemblGenome=Jr10_04600\|UniProtKB=A0A2I4H592	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_7G064600\|UniProtKB=A0A0A0K244	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_3G585900\|UniProtKB=A0A0A0LB48	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_3G305400\|UniProtKB=M5WSF0	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_43289\|UniProtKB=D8T2I9	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c3_28590\|UniProtKB=A0A2K1KWG6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_6950\|UniProtKB=A0A2K1K6F4	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_3810\|UniProtKB=A9TNJ5	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0119s0058\|UniProtKB=A0A2R6WAJ5	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_007050030\|UniProtKB=A0A1Y1ILD1	Klebsormidium nitens	O