PANTHER Gene Information

Gene Symbol(s):

POPTR_008G159900

Organism:

Populus trichocarpa

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Gene Name:

SWI_SNF-like complex subunit BAF250 C-terminal domain-containing protein

Gene ID:

POPTR_008G159900v3

Protein ID:

A9PH61

Persistent Id:

PTN001761233

Alternate Ids:

A9PH61_POPTR(UniProtKB-ID)	ABK95714(EMBL-CDS)
224099867(GI)	XM_002311615(refSeq)
CM009297(EMBL)	POPTR_008G159900v3(Ensembl)
7467516(GeneID)	A9PH61(Synonym)
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PANTHER Classification

PANTHER Family:	BRG-1 ASSOCIATED FACTOR 250 BAF250 (PTHR12656)
PANTHER Subfamily:	TRITHORAX GROUP PROTEIN OSA (PTHR12656:SF5)
PANTHER GO-slim Molecular Function:	nucleosome binding
PANTHER GO-slim Biological Process:	positive regulation of DNA-templated transcription regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	SWI/SNF complex nucleoplasm
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	nucleosome binding
GO BP Complete:	chromatin remodeling, regulation of nuclear division, embryo development ending in seed dormancy, flower development, positive regulation of DNA-templated transcription, anther development, leaf development, regulation of endosperm development, regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus, SWI/SNF complex, brahma complex, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=18040\|UniProtKB=Q8NFD5	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000018733.6\|UniProtKB=A0A2I3SSA4	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000011723.4\|UniProtKB=G3R7T7	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000002270.4\|UniProtKB=F7B475	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1926129\|UniProtKB=E9Q4N7	Mus musculus	LDO
RAT\|RGD=708504\|UniProtKB=A0A0G2JVD3	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000002728.7\|UniProtKB=A0A3Q1MXM3	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000004064.5\|UniProtKB=A0A287AEF8	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000000518.4\|UniProtKB=A0A3Q2LL53	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000006278.6\|UniProtKB=A0A2I2V297	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845000636.1\|UniProtKB=A0A8I3MIC5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000008068.5\|UniProtKB=A0A5F8GGZ0	Monodelphis domestica	LDO
CHICK\|Ensembl=ENSGALG00010004101.1\|UniProtKB=A0A8V0XLF1	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000005132.4\|UniProtKB=G1KDQ1	Anolis carolinensis	LDO
XENLA\|Gene=arid1b.L\|UniProtKB=A0A8J0VAI4	Xenopus laevis	O
XENLA\|Gene=arid1b.S\|UniProtKB=A0A8J1KSU9	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1010354\|UniProtKB=A0A8J0R3N2	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000017229.2\|UniProtKB=A0A3B3HM98	Oryzias latipes	LDO
DANRE\|Gene=arid1b\|UniProtKB=A0A8M2B773	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000016845.1\|UniProtKB=W5NJL3	lepisosteus oculatus	LDO
HUMAN\|HGNC=11110\|UniProtKB=O14497	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000000388.7\|UniProtKB=K6ZTZ3	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000004967.3\|UniProtKB=A0A2I2YHR1	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000012697.4\|UniProtKB=F7DX53	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1935147\|UniProtKB=A2BH40	Mus musculus	LDO
RAT\|RGD=1310500\|UniProtKB=A0A8I6AJE2	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001024.6\|UniProtKB=A0A3Q1M2B9	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000003559.5\|UniProtKB=A0A287BLL9	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000017991.4\|UniProtKB=A0A9L0SRH9	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000012814.6\|UniProtKB=A0A337SA98	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845011619.1\|UniProtKB=A0A8I3NLJ7	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000014380.4\|UniProtKB=F6T7C8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000041657.1\|UniProtKB=A0A6I8N916	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010014301.1\|UniProtKB=A0A8V0YQD7	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000016601.4\|UniProtKB=H9GNF0	Anolis carolinensis	LDO
XENLA\|Gene=LOC108708921\|UniProtKB=A0A8J0UAS1	Xenopus laevis	O
XENLA\|Gene=LOC108707477\|UniProtKB=A0A8J0UCR6	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-492490\|UniProtKB=A0A8J0QQ51	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000004410.4\|UniProtKB=H2LHS0	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000024733.1\|UniProtKB=A0A3B3IH70	Oryzias latipes	LDO
DANRE\|Gene=arid1aa\|UniProtKB=A0A8M9PDQ2	Danio rerio	O
DANRE\|Gene=arid1ab\|UniProtKB=A0A8M9PSC1	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000003798.1\|UniProtKB=W5M835	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000014057.2\|UniProtKB=F6U2A4	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118422709\|UniProtKB=A0A9J7LPW1	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC580818\|UniProtKB=A0A7M7HPT5	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00002717\|UniProtKB=J7SA49	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG12337\|UniProtKB=A8XFL2	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00095271\|UniProtKB=A0A2A6BNY8	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0261885\|UniProtKB=Q8IN94	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP001786\|UniProtKB=A0A1S4GDN3	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC013586\|UniProtKB=D6W744	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_327651\|UniProtKB=E9HBC1	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW014189\|UniProtKB=B7QHW3	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG192533\|UniProtKB=T1FU22	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g139771\|UniProtKB=A7T009	Nematostella vectensis	LDO
CANAL\|CGD=CAL0000183791\|UniProtKB=Q5AA11	Candida albicans	LDO
USTMA\|EnsemblGenome=UMAG_05262\|UniProtKB=A0A0D1BW50	Ustilago maydis	LDO
AMBTC\|EnsemblGenome=AMTR_s00002p00268650\|UniProtKB=W1P0K0	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_63G00370\|UniProtKB=A0A0K9NVB1	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g25740\|UniProtKB=A0A804ITV5	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma07_g06660\|UniProtKB=A0A804JSY9	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_017162mg\|UniProtKB=K3YSB8	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G198900\|UniProtKB=C5XWG0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb183490\|UniProtKB=K7UGA3	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os07g0609766\|UniProtKB=Q6YTW6	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g47466v3\|UniProtKB=A0A0Q3FLN1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0590190\|UniProtKB=A0A8I6YUN8	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6B02G235800\|UniProtKB=A0A3B6PLF5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G205500\|UniProtKB=A0A3B6NQF1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G190800\|UniProtKB=A0A3B6QER1	Triticum aestivum	LDO
NELNU\|Gene=LOC104609580\|UniProtKB=A0A1U8B0S8	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110790261\|UniProtKB=A0A9R0IKB0	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0614391\|UniProtKB=A0A251SXG3	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300151530\|UniProtKB=A0A9R1XSU8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a006168mg\|UniProtKB=A0A022Q4V4	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a006472mg\|UniProtKB=A0A022RN03	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_07884\|UniProtKB=A0A2G2ZUX9	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG401006082\|UniProtKB=M1A681	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc09g083000.3\|UniProtKB=A0A3Q7I6M5	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107804220\|UniProtKB=A0A1S4B3Y7	Nicotiana tabacum	O
TOBAC\|Gene=LOC107816639\|UniProtKB=A0A1S4C9R7	Nicotiana tabacum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400013391\|UniProtKB=M1B1C7	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g005310.3\|UniProtKB=A0A3Q7FCQ0	Solanum lycopersicum	O
TOBAC\|Gene=LOC107761671\|UniProtKB=A0A1S3X6R2	Nicotiana tabacum	O
TOBAC\|Gene=LOC107787622\|UniProtKB=A0A1S3ZK72	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi05g00615\|UniProtKB=A5AL12	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_H03187\|UniProtKB=A0A059B3M7	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00032222001\|UniProtKB=A0A078FE13	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00048467001\|UniProtKB=A0A078FCM8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra033894\|UniProtKB=M4EYK2	Brassica campestris	LDO
ARATH\|TAIR=locus=2094618\|UniProtKB=Q9LS90	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107914994\|UniProtKB=A0A1U8KAM5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107910616\|UniProtKB=A0A1U8JUQ1	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_020741\|UniProtKB=A0A061EU81	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g012466mg\|UniProtKB=A0A067EFT6	Citrus sinensis	LDO
MANES\|EnsemblGenome=MANES_15G034800\|UniProtKB=A0A2C9UDM9	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_03G170700\|UniProtKB=A0A2C9W8E7	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0910220\|UniProtKB=B9RTG9	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_02G001600\|UniProtKB=I1JB49	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G001900\|UniProtKB=I1L7C9	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g041115\|UniProtKB=A0A072VGU8	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr07_24300\|UniProtKB=A0A2I4EGY7	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G144150\|UniProtKB=A0A0A0L4L4	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G025500\|UniProtKB=M5XRJ6	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_117806\|UniProtKB=D8SIQ4	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_126434\|UniProtKB=D8SWC5	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c9_410\|UniProtKB=A0A2K1K1E0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c15_1060\|UniProtKB=A9TDZ7	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0008s0256\|UniProtKB=A0A2R6XN54	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002510020\|UniProtKB=A0A1Y1I472	Klebsormidium nitens	LDO