PANTHER Gene Information

Gene Symbol(s):

arid1b.L

Organism:

Xenopus laevis

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Tree

Gene Name:

AT-rich interactive domain-containing protein 1B isoform X1

Gene ID:

arid1b.L

Protein ID:

A0A8J0VAI4

Persistent Id:

PTN008999892

Alternate Ids:

A0A8J0VAI4_XENLA(UniProtKB-ID)	108716708(GeneID)
A0A8J0VAI4(Synonym)	XP_018118571(refSeq)
1069356943(GI)
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PANTHER Classification

PANTHER Family:	BRG-1 ASSOCIATED FACTOR 250 BAF250 (PTHR12656)
PANTHER Subfamily:	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1B (PTHR12656:SF11)
PANTHER GO-slim Molecular Function:	nucleosome binding
PANTHER GO-slim Biological Process:	positive regulation of DNA-templated transcription regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	SWI/SNF complex nucleoplasm
PANTHER protein class:

Pathway Categories:

Wnt signaling pathway

Switched/Sucrose Non Fermentation

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, nucleosome binding
GO BP Complete:	chromatin remodeling, positive regulation of DNA-templated transcription, regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus, SWI/SNF complex, brahma complex, nBAF complex, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=18040\|UniProtKB=Q8NFD5	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000018733.6\|UniProtKB=A0A2I3SSA4	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000011723.4\|UniProtKB=G3R7T7	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000002270.4\|UniProtKB=F7B475	Macaca mulatta	O
MOUSE\|MGI=MGI=1926129\|UniProtKB=E9Q4N7	Mus musculus	O
RAT\|RGD=708504\|UniProtKB=A0A0G2JVD3	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000002728.7\|UniProtKB=A0A3Q1MXM3	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000004064.5\|UniProtKB=A0A287AEF8	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000000518.4\|UniProtKB=A0A3Q2LL53	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000006278.6\|UniProtKB=A0A2I2V297	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845000636.1\|UniProtKB=A0A8I3MIC5	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000008068.5\|UniProtKB=A0A5F8GGZ0	Monodelphis domestica	O
CHICK\|Ensembl=ENSGALG00010004101.1\|UniProtKB=A0A8V0XLF1	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000005132.4\|UniProtKB=G1KDQ1	Anolis carolinensis	O
XENTR\|Xenbase=XB-GENE-1010354\|UniProtKB=A0A8J0R3N2	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000017229.2\|UniProtKB=A0A3B3HM98	Oryzias latipes	O
DANRE\|Gene=arid1b\|UniProtKB=A0A8M2B773	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000016845.1\|UniProtKB=W5NJL3	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000014057.2\|UniProtKB=F6U2A4	Ciona intestinalis	O
BRAFL\|Gene=LOC118422709\|UniProtKB=A0A9J7LPW1	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC580818\|UniProtKB=A0A7M7HPT5	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00002717\|UniProtKB=J7SA49	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG12337\|UniProtKB=A8XFL2	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00095271\|UniProtKB=A0A2A6BNY8	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0261885\|UniProtKB=Q8IN94	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP001786\|UniProtKB=A0A1S4GDN3	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC013586\|UniProtKB=D6W744	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_327651\|UniProtKB=E9HBC1	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW014189\|UniProtKB=B7QHW3	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG192533\|UniProtKB=T1FU22	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g139771\|UniProtKB=A7T009	Nematostella vectensis	O
CANAL\|CGD=CAL0000183791\|UniProtKB=Q5AA11	Candida albicans	O
USTMA\|EnsemblGenome=UMAG_05262\|UniProtKB=A0A0D1BW50	Ustilago maydis	O
AMBTC\|EnsemblGenome=AMTR_s00002p00268650\|UniProtKB=W1P0K0	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_63G00370\|UniProtKB=A0A0K9NVB1	Zostera marina	O
MUSAM\|EnsemblGenome=Ma04_g25740\|UniProtKB=A0A804ITV5	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma07_g06660\|UniProtKB=A0A804JSY9	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_017162mg\|UniProtKB=K3YSB8	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3004G198900\|UniProtKB=C5XWG0	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb183490\|UniProtKB=K7UGA3	Zea mays	O
ORYSJ\|EnsemblGenome=Os07g0609766\|UniProtKB=Q6YTW6	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g47466v3\|UniProtKB=A0A0Q3FLN1	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0590190\|UniProtKB=A0A8I6YUN8	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS6B02G235800\|UniProtKB=A0A3B6PLF5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G205500\|UniProtKB=A0A3B6NQF1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G190800\|UniProtKB=A0A3B6QER1	Triticum aestivum	O
NELNU\|Gene=LOC104609580\|UniProtKB=A0A1U8B0S8	Nelumbo nucifera	O
SPIOL\|Gene=LOC110790261\|UniProtKB=A0A9R0IKB0	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0614391\|UniProtKB=A0A251SXG3	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C300151530\|UniProtKB=A0A9R1XSU8	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a006168mg\|UniProtKB=A0A022Q4V4	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a006472mg\|UniProtKB=A0A022RN03	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_07884\|UniProtKB=A0A2G2ZUX9	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG401006082\|UniProtKB=M1A681	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc09g083000.3\|UniProtKB=A0A3Q7I6M5	Solanum lycopersicum	O
TOBAC\|Gene=LOC107804220\|UniProtKB=A0A1S4B3Y7	Nicotiana tabacum	O
TOBAC\|Gene=LOC107816639\|UniProtKB=A0A1S4C9R7	Nicotiana tabacum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400013391\|UniProtKB=M1B1C7	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g005310.3\|UniProtKB=A0A3Q7FCQ0	Solanum lycopersicum	O
TOBAC\|Gene=LOC107761671\|UniProtKB=A0A1S3X6R2	Nicotiana tabacum	O
TOBAC\|Gene=LOC107787622\|UniProtKB=A0A1S3ZK72	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi05g00615\|UniProtKB=A5AL12	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_H03187\|UniProtKB=A0A059B3M7	Eucalyptus grandis	O
BRANA\|Gene_ORFName=GSBRNA2T00032222001\|UniProtKB=A0A078FE13	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00048467001\|UniProtKB=A0A078FCM8	Brassica napus	O
BRACM\|EnsemblGenome=Bra033894\|UniProtKB=M4EYK2	Brassica campestris	O
ARATH\|TAIR=locus=2094618\|UniProtKB=Q9LS90	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107914994\|UniProtKB=A0A1U8KAM5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107910616\|UniProtKB=A0A1U8JUQ1	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_020741\|UniProtKB=A0A061EU81	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g012466mg\|UniProtKB=A0A067EFT6	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_008G159900v3\|UniProtKB=A9PH61	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_15G034800\|UniProtKB=A0A2C9UDM9	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_03G170700\|UniProtKB=A0A2C9W8E7	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0910220\|UniProtKB=B9RTG9	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_02G001600\|UniProtKB=I1JB49	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G001900\|UniProtKB=I1L7C9	Glycine max	O
MEDTR\|EnsemblGenome=MTR_1g041115\|UniProtKB=A0A072VGU8	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr07_24300\|UniProtKB=A0A2I4EGY7	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_3G144150\|UniProtKB=A0A0A0L4L4	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_1G025500\|UniProtKB=M5XRJ6	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_117806\|UniProtKB=D8SIQ4	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_126434\|UniProtKB=D8SWC5	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c9_410\|UniProtKB=A0A2K1K1E0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c15_1060\|UniProtKB=A9TDZ7	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0008s0256\|UniProtKB=A0A2R6XN54	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_002510020\|UniProtKB=A0A1Y1I472	Klebsormidium nitens	O